Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RNF183Q96D59 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF183Q96D59 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF183Q96D59 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF183Q96D59 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF183Q96D59 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF183Q96D59 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.77■□□□□ 0.44
RNF183Q96D59 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF183Q96D59 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF183Q96D59 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.77■□□□□ 0.43
RNF183Q96D59 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF183Q96D59 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF183Q96D59 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF183Q96D59 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF183Q96D59 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RNF183Q96D59 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF183Q96D59 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF183Q96D59 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF183Q96D59 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF183Q96D59 AC018755.3-202ENST00000596210 929 ntBASIC17.75■□□□□ 0.43
RNF183Q96D59 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF183Q96D59 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF183Q96D59 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF183Q96D59 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF183Q96D59 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.74■□□□□ 0.43
RNF183Q96D59 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF183Q96D59 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF183Q96D59 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF183Q96D59 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF183Q96D59 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF183Q96D59 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF183Q96D59 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF183Q96D59 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF183Q96D59 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF183Q96D59 SPCS2P3-201ENST00000500401 656 ntBASIC17.73■□□□□ 0.43
RNF183Q96D59 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.73■□□□□ 0.43
RNF183Q96D59 MIR6765-201ENST00000614092 87 ntBASIC17.73■□□□□ 0.43
RNF183Q96D59 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF183Q96D59 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF183Q96D59 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF183Q96D59 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF183Q96D59 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.73■□□□□ 0.43
RNF183Q96D59 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RNF183Q96D59 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF183Q96D59 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF183Q96D59 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF183Q96D59 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RNF183Q96D59 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF183Q96D59 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF183Q96D59 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF183Q96D59 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF183Q96D59 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF183Q96D59 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF183Q96D59 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF183Q96D59 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
RNF183Q96D59 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF183Q96D59 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RNF183Q96D59 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF183Q96D59 BHLHE23-202ENST00000612929 1109 ntBASIC17.7■□□□□ 0.42
RNF183Q96D59 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF183Q96D59 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RNF183Q96D59 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF183Q96D59 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF183Q96D59 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF183Q96D59 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF183Q96D59 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF183Q96D59 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF183Q96D59 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF183Q96D59 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF183Q96D59 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF183Q96D59 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF183Q96D59 AC074183.2-201ENST00000623112 922 ntBASIC17.69■□□□□ 0.42
RNF183Q96D59 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF183Q96D59 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF183Q96D59 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF183Q96D59 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RNF183Q96D59 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
RNF183Q96D59 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RNF183Q96D59 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RNF183Q96D59 AC139795.1-202ENST00000500444 432 ntBASIC17.68■□□□□ 0.42
RNF183Q96D59 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF183Q96D59 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
RNF183Q96D59 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RNF183Q96D59 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF183Q96D59 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF183Q96D59 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF183Q96D59 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RNF183Q96D59 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.67■□□□□ 0.42
RNF183Q96D59 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RNF183Q96D59 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.67■□□□□ 0.42
RNF183Q96D59 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
RNF183Q96D59 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF183Q96D59 AC142472.1-201ENST00000612013 1741 ntBASIC17.67■□□□□ 0.42
RNF183Q96D59 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF183Q96D59 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF183Q96D59 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RNF183Q96D59 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF183Q96D59 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF183Q96D59 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF183Q96D59 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms