Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC137630.3-201ENST00000607245 391 ntBASIC20.66■□□□□ 0.9
CCDC168Q8NDH2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC168Q8NDH2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC168Q8NDH2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC168Q8NDH2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC168Q8NDH2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC168Q8NDH2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC168Q8NDH2 KRT18P24-201ENST00000344739 1156 ntBASIC20.65■□□□□ 0.9
CCDC168Q8NDH2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC168Q8NDH2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC168Q8NDH2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC168Q8NDH2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC168Q8NDH2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.64■□□□□ 0.9
CCDC168Q8NDH2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCDC168Q8NDH2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC168Q8NDH2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC168Q8NDH2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC168Q8NDH2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CCDC168Q8NDH2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC168Q8NDH2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC168Q8NDH2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.63■□□□□ 0.89
CCDC168Q8NDH2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC168Q8NDH2 AC021242.3-201ENST00000607598 1377 ntBASIC20.63■□□□□ 0.89
CCDC168Q8NDH2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC168Q8NDH2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC168Q8NDH2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC168Q8NDH2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC168Q8NDH2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
CCDC168Q8NDH2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC168Q8NDH2 AC135279.3-201ENST00000610945 1311 ntBASIC20.61■□□□□ 0.89
CCDC168Q8NDH2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC168Q8NDH2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC168Q8NDH2 AL117332.1-201ENST00000622628 974 ntBASIC20.61■□□□□ 0.89
CCDC168Q8NDH2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC168Q8NDH2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC168Q8NDH2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC168Q8NDH2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC168Q8NDH2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CCDC168Q8NDH2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC168Q8NDH2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC168Q8NDH2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCDC168Q8NDH2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC168Q8NDH2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC168Q8NDH2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CCDC168Q8NDH2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
CCDC168Q8NDH2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CCDC168Q8NDH2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC168Q8NDH2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC168Q8NDH2 AL356740.2-201ENST00000601559 647 ntBASIC20.58■□□□□ 0.89
CCDC168Q8NDH2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC168Q8NDH2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC168Q8NDH2 AP004833.2-201ENST00000532228 1454 ntBASIC20.58■□□□□ 0.88
CCDC168Q8NDH2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC168Q8NDH2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC168Q8NDH2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CCDC168Q8NDH2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.57■□□□□ 0.88
CCDC168Q8NDH2 AC106739.1-201ENST00000617035 715 ntBASIC20.57■□□□□ 0.88
CCDC168Q8NDH2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC168Q8NDH2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC168Q8NDH2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC168Q8NDH2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC168Q8NDH2 AC142381.2-201ENST00000566120 298 ntBASIC20.56■□□□□ 0.88
CCDC168Q8NDH2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC168Q8NDH2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC168Q8NDH2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC168Q8NDH2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC168Q8NDH2 AC087623.3-201ENST00000607047 1098 ntBASIC20.55■□□□□ 0.88
CCDC168Q8NDH2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC168Q8NDH2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC168Q8NDH2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC168Q8NDH2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC168Q8NDH2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC168Q8NDH2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CCDC168Q8NDH2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC168Q8NDH2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC168Q8NDH2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC168Q8NDH2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC168Q8NDH2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC168Q8NDH2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC168Q8NDH2 AL512631.2-201ENST00000604634 923 ntBASIC20.53■□□□□ 0.88
CCDC168Q8NDH2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC168Q8NDH2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC168Q8NDH2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC168Q8NDH2 AL359504.2-201ENST00000605506 1601 ntBASIC20.53■□□□□ 0.88
CCDC168Q8NDH2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC168Q8NDH2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC168Q8NDH2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC168Q8NDH2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.52■□□□□ 0.87
CCDC168Q8NDH2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC168Q8NDH2 AL031432.3-201ENST00000607698 485 ntBASIC20.51■□□□□ 0.87
CCDC168Q8NDH2 AL162430.1-201ENST00000480705 870 ntBASIC20.51■□□□□ 0.87
CCDC168Q8NDH2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC168Q8NDH2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CCDC168Q8NDH2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC168Q8NDH2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
CCDC168Q8NDH2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC168Q8NDH2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC168Q8NDH2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC168Q8NDH2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC168Q8NDH2 MIR4281-201ENST00000580852 62 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms