Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TMEFF1Q8IYR6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TMEFF1Q8IYR6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TMEFF1Q8IYR6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.3■■□□□ 1.48
TMEFF1Q8IYR6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
TMEFF1Q8IYR6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.29■■□□□ 1.48
TMEFF1Q8IYR6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.29■■□□□ 1.48
TMEFF1Q8IYR6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TMEFF1Q8IYR6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.29■■□□□ 1.48
TMEFF1Q8IYR6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
TMEFF1Q8IYR6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TMEFF1Q8IYR6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.28■■□□□ 1.48
TMEFF1Q8IYR6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TMEFF1Q8IYR6 Z92544.1-202ENST00000571933 1220 ntBASIC24.28■■□□□ 1.48
TMEFF1Q8IYR6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
TMEFF1Q8IYR6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TMEFF1Q8IYR6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TMEFF1Q8IYR6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.27■■□□□ 1.48
TMEFF1Q8IYR6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TMEFF1Q8IYR6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
TMEFF1Q8IYR6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
TMEFF1Q8IYR6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.27■■□□□ 1.48
TMEFF1Q8IYR6 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TMEFF1Q8IYR6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TMEFF1Q8IYR6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
TMEFF1Q8IYR6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
TMEFF1Q8IYR6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TMEFF1Q8IYR6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
TMEFF1Q8IYR6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TMEFF1Q8IYR6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TMEFF1Q8IYR6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TMEFF1Q8IYR6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
TMEFF1Q8IYR6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.25■■□□□ 1.47
TMEFF1Q8IYR6 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.25■■□□□ 1.47
TMEFF1Q8IYR6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TMEFF1Q8IYR6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
TMEFF1Q8IYR6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.25■■□□□ 1.47
TMEFF1Q8IYR6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
TMEFF1Q8IYR6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TMEFF1Q8IYR6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TMEFF1Q8IYR6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.24■■□□□ 1.47
TMEFF1Q8IYR6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
TMEFF1Q8IYR6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
TMEFF1Q8IYR6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.23■■□□□ 1.47
TMEFF1Q8IYR6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TMEFF1Q8IYR6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
TMEFF1Q8IYR6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TMEFF1Q8IYR6 AC008406.3-201ENST00000620001 1374 ntBASIC24.22■■□□□ 1.47
TMEFF1Q8IYR6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TMEFF1Q8IYR6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TMEFF1Q8IYR6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
TMEFF1Q8IYR6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.21■■□□□ 1.47
TMEFF1Q8IYR6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TMEFF1Q8IYR6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TMEFF1Q8IYR6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TMEFF1Q8IYR6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TMEFF1Q8IYR6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.2■■□□□ 1.46
TMEFF1Q8IYR6 KRT125P-201ENST00000546827 989 ntBASIC24.2■■□□□ 1.46
TMEFF1Q8IYR6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
TMEFF1Q8IYR6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TMEFF1Q8IYR6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
TMEFF1Q8IYR6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.19■■□□□ 1.46
TMEFF1Q8IYR6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.19■■□□□ 1.46
TMEFF1Q8IYR6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.19■■□□□ 1.46
TMEFF1Q8IYR6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.19■■□□□ 1.46
TMEFF1Q8IYR6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.18■■□□□ 1.46
TMEFF1Q8IYR6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TMEFF1Q8IYR6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
TMEFF1Q8IYR6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TMEFF1Q8IYR6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
TMEFF1Q8IYR6 MIR4787-201ENST00000607364 84 ntBASIC24.18■■□□□ 1.46
TMEFF1Q8IYR6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TMEFF1Q8IYR6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TMEFF1Q8IYR6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.17■■□□□ 1.46
TMEFF1Q8IYR6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.17■■□□□ 1.46
TMEFF1Q8IYR6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
TMEFF1Q8IYR6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TMEFF1Q8IYR6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
TMEFF1Q8IYR6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
TMEFF1Q8IYR6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TMEFF1Q8IYR6 BX664725.1-201ENST00000438252 379 ntBASIC24.16■■□□□ 1.46
TMEFF1Q8IYR6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
TMEFF1Q8IYR6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
TMEFF1Q8IYR6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TMEFF1Q8IYR6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.15■■□□□ 1.46
TMEFF1Q8IYR6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TMEFF1Q8IYR6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.15■■□□□ 1.46
TMEFF1Q8IYR6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
TMEFF1Q8IYR6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
TMEFF1Q8IYR6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.14■■□□□ 1.45
TMEFF1Q8IYR6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TMEFF1Q8IYR6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TMEFF1Q8IYR6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TMEFF1Q8IYR6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
TMEFF1Q8IYR6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.13■■□□□ 1.45
TMEFF1Q8IYR6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.13■■□□□ 1.45
TMEFF1Q8IYR6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.13■■□□□ 1.45
TMEFF1Q8IYR6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TMEFF1Q8IYR6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TMEFF1Q8IYR6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms