Protein–RNA interactions for Protein: Q5VXH5

PRAMEF7, PRAME family member 7, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF7Q5VXH5 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PRAMEF7Q5VXH5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PRAMEF7Q5VXH5 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.4■■□□□ 1.18
PRAMEF7Q5VXH5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.39■■□□□ 1.17
PRAMEF7Q5VXH5 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
PRAMEF7Q5VXH5 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PRAMEF7Q5VXH5 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PRAMEF7Q5VXH5 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PRAMEF7Q5VXH5 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PRAMEF7Q5VXH5 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PRAMEF7Q5VXH5 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PRAMEF7Q5VXH5 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PRAMEF7Q5VXH5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.38■■□□□ 1.17
PRAMEF7Q5VXH5 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PRAMEF7Q5VXH5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PRAMEF7Q5VXH5 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.37■■□□□ 1.17
PRAMEF7Q5VXH5 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PRAMEF7Q5VXH5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PRAMEF7Q5VXH5 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
PRAMEF7Q5VXH5 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PRAMEF7Q5VXH5 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PRAMEF7Q5VXH5 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.36■■□□□ 1.17
PRAMEF7Q5VXH5 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PRAMEF7Q5VXH5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PRAMEF7Q5VXH5 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PRAMEF7Q5VXH5 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PRAMEF7Q5VXH5 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.35■■□□□ 1.17
PRAMEF7Q5VXH5 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PRAMEF7Q5VXH5 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PRAMEF7Q5VXH5 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PRAMEF7Q5VXH5 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PRAMEF7Q5VXH5 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.34■■□□□ 1.17
PRAMEF7Q5VXH5 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PRAMEF7Q5VXH5 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
PRAMEF7Q5VXH5 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.34■■□□□ 1.17
PRAMEF7Q5VXH5 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.34■■□□□ 1.17
PRAMEF7Q5VXH5 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
PRAMEF7Q5VXH5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PRAMEF7Q5VXH5 AC135731.1-201ENST00000569415 2548 ntBASIC22.33■■□□□ 1.17
PRAMEF7Q5VXH5 AC142381.3-201ENST00000568208 1670 ntBASIC22.33■■□□□ 1.17
PRAMEF7Q5VXH5 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PRAMEF7Q5VXH5 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PRAMEF7Q5VXH5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
PRAMEF7Q5VXH5 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PRAMEF7Q5VXH5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PRAMEF7Q5VXH5 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
PRAMEF7Q5VXH5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PRAMEF7Q5VXH5 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PRAMEF7Q5VXH5 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PRAMEF7Q5VXH5 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PRAMEF7Q5VXH5 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.32■■□□□ 1.16
PRAMEF7Q5VXH5 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PRAMEF7Q5VXH5 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF7Q5VXH5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF7Q5VXH5 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.31■■□□□ 1.16
PRAMEF7Q5VXH5 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF7Q5VXH5 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF7Q5VXH5 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF7Q5VXH5 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF7Q5VXH5 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF7Q5VXH5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF7Q5VXH5 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.31■■□□□ 1.16
PRAMEF7Q5VXH5 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF7Q5VXH5 AL157400.5-201ENST00000507624 621 ntBASIC22.31■■□□□ 1.16
PRAMEF7Q5VXH5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF7Q5VXH5 AC025884.2-201ENST00000553429 711 ntBASIC22.31■■□□□ 1.16
PRAMEF7Q5VXH5 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.31■■□□□ 1.16
PRAMEF7Q5VXH5 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF7Q5VXH5 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF7Q5VXH5 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF7Q5VXH5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF7Q5VXH5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF7Q5VXH5 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF7Q5VXH5 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF7Q5VXH5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
PRAMEF7Q5VXH5 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.3■■□□□ 1.16
PRAMEF7Q5VXH5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PRAMEF7Q5VXH5 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PRAMEF7Q5VXH5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PRAMEF7Q5VXH5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PRAMEF7Q5VXH5 AC060814.1-201ENST00000554326 538 ntBASIC22.29■■□□□ 1.16
PRAMEF7Q5VXH5 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PRAMEF7Q5VXH5 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PRAMEF7Q5VXH5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
PRAMEF7Q5VXH5 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PRAMEF7Q5VXH5 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
PRAMEF7Q5VXH5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.29■■□□□ 1.16
PRAMEF7Q5VXH5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.28■■□□□ 1.16
PRAMEF7Q5VXH5 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PRAMEF7Q5VXH5 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PRAMEF7Q5VXH5 MIR639-201ENST00000384974 98 ntBASIC22.28■■□□□ 1.16
PRAMEF7Q5VXH5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PRAMEF7Q5VXH5 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PRAMEF7Q5VXH5 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PRAMEF7Q5VXH5 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
PRAMEF7Q5VXH5 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.27■■□□□ 1.16
PRAMEF7Q5VXH5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.27■■□□□ 1.16
PRAMEF7Q5VXH5 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
PRAMEF7Q5VXH5 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.27■■□□□ 1.16
PRAMEF7Q5VXH5 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms