Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRTCAP3Q53RY4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KRTCAP3Q53RY4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRTCAP3Q53RY4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.83■■□□□ 1.09
KRTCAP3Q53RY4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
KRTCAP3Q53RY4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRTCAP3Q53RY4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.83■■□□□ 1.09
KRTCAP3Q53RY4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
KRTCAP3Q53RY4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
KRTCAP3Q53RY4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRTCAP3Q53RY4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
KRTCAP3Q53RY4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
KRTCAP3Q53RY4 LINC01003-201ENST00000564834 1764 ntBASIC21.82■■□□□ 1.08
KRTCAP3Q53RY4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
KRTCAP3Q53RY4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRTCAP3Q53RY4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRTCAP3Q53RY4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.82■■□□□ 1.08
KRTCAP3Q53RY4 Z92544.1-202ENST00000571933 1220 ntBASIC21.82■■□□□ 1.08
KRTCAP3Q53RY4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRTCAP3Q53RY4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRTCAP3Q53RY4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KRTCAP3Q53RY4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
KRTCAP3Q53RY4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.81■■□□□ 1.08
KRTCAP3Q53RY4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
KRTCAP3Q53RY4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KRTCAP3Q53RY4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KRTCAP3Q53RY4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.8■■□□□ 1.08
KRTCAP3Q53RY4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
KRTCAP3Q53RY4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KRTCAP3Q53RY4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.8■■□□□ 1.08
KRTCAP3Q53RY4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.8■■□□□ 1.08
KRTCAP3Q53RY4 AC131212.1-201ENST00000613771 668 ntBASIC21.8■■□□□ 1.08
KRTCAP3Q53RY4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KRTCAP3Q53RY4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRTCAP3Q53RY4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.8■■□□□ 1.08
KRTCAP3Q53RY4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.8■■□□□ 1.08
KRTCAP3Q53RY4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KRTCAP3Q53RY4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KRTCAP3Q53RY4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRTCAP3Q53RY4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
KRTCAP3Q53RY4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KRTCAP3Q53RY4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KRTCAP3Q53RY4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KRTCAP3Q53RY4 AL592295.1-201ENST00000400984 884 ntBASIC21.78■■□□□ 1.08
KRTCAP3Q53RY4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
KRTCAP3Q53RY4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
KRTCAP3Q53RY4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.78■■□□□ 1.08
KRTCAP3Q53RY4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
KRTCAP3Q53RY4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
KRTCAP3Q53RY4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
KRTCAP3Q53RY4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.77■■□□□ 1.08
KRTCAP3Q53RY4 AC239859.2-201ENST00000444165 318 ntBASIC21.77■■□□□ 1.08
KRTCAP3Q53RY4 THA1P-201ENST00000590384 1145 ntBASIC21.77■■□□□ 1.08
KRTCAP3Q53RY4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
KRTCAP3Q53RY4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRTCAP3Q53RY4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KRTCAP3Q53RY4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRTCAP3Q53RY4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.76■■□□□ 1.07
KRTCAP3Q53RY4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.76■■□□□ 1.07
KRTCAP3Q53RY4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KRTCAP3Q53RY4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRTCAP3Q53RY4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KRTCAP3Q53RY4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRTCAP3Q53RY4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRTCAP3Q53RY4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
KRTCAP3Q53RY4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRTCAP3Q53RY4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
KRTCAP3Q53RY4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.74■■□□□ 1.07
KRTCAP3Q53RY4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KRTCAP3Q53RY4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRTCAP3Q53RY4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRTCAP3Q53RY4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRTCAP3Q53RY4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
KRTCAP3Q53RY4 AL356441.2-201ENST00000443009 864 ntBASIC21.73■■□□□ 1.07
KRTCAP3Q53RY4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRTCAP3Q53RY4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.73■■□□□ 1.07
KRTCAP3Q53RY4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRTCAP3Q53RY4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KRTCAP3Q53RY4 BX255925.1-201ENST00000566954 1854 ntBASIC21.73■■□□□ 1.07
KRTCAP3Q53RY4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRTCAP3Q53RY4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
KRTCAP3Q53RY4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.72■■□□□ 1.07
KRTCAP3Q53RY4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRTCAP3Q53RY4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.71■■□□□ 1.07
KRTCAP3Q53RY4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.71■■□□□ 1.07
KRTCAP3Q53RY4 KRT18P24-201ENST00000344739 1156 ntBASIC21.71■■□□□ 1.07
KRTCAP3Q53RY4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.71■■□□□ 1.07
KRTCAP3Q53RY4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRTCAP3Q53RY4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.71■■□□□ 1.07
KRTCAP3Q53RY4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRTCAP3Q53RY4 KRT125P-201ENST00000546827 989 ntBASIC21.71■■□□□ 1.07
KRTCAP3Q53RY4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
KRTCAP3Q53RY4 AC142472.1-201ENST00000612013 1741 ntBASIC21.71■■□□□ 1.07
KRTCAP3Q53RY4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.7■■□□□ 1.06
KRTCAP3Q53RY4 BX664725.1-201ENST00000438252 379 ntBASIC21.7■■□□□ 1.06
KRTCAP3Q53RY4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.7■■□□□ 1.06
KRTCAP3Q53RY4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.7■■□□□ 1.06
KRTCAP3Q53RY4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
KRTCAP3Q53RY4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
KRTCAP3Q53RY4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms