Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNRPEP62304 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNRPEP62304 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.75■□□□□ 0.59
SNRPEP62304 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SNRPEP62304 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SNRPEP62304 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRPEP62304 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRPEP62304 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRPEP62304 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SNRPEP62304 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SNRPEP62304 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRPEP62304 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.74■□□□□ 0.59
SNRPEP62304 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SNRPEP62304 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.73■□□□□ 0.59
SNRPEP62304 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRPEP62304 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNRPEP62304 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRPEP62304 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRPEP62304 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC18.73■□□□□ 0.59
SNRPEP62304 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNRPEP62304 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRPEP62304 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.73■□□□□ 0.59
SNRPEP62304 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRPEP62304 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRPEP62304 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRPEP62304 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRPEP62304 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNRPEP62304 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNRPEP62304 AC097639.1-201ENST00000565519 1891 ntBASIC18.72■□□□□ 0.59
SNRPEP62304 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.72■□□□□ 0.59
SNRPEP62304 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNRPEP62304 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNRPEP62304 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.71■□□□□ 0.59
SNRPEP62304 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.71■□□□□ 0.59
SNRPEP62304 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SNRPEP62304 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNRPEP62304 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SNRPEP62304 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SNRPEP62304 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNRPEP62304 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
SNRPEP62304 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNRPEP62304 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNRPEP62304 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNRPEP62304 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNRPEP62304 PKD1P6-201ENST00000343738 4769 ntBASIC18.7■□□□□ 0.58
SNRPEP62304 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNRPEP62304 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNRPEP62304 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNRPEP62304 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNRPEP62304 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNRPEP62304 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNRPEP62304 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.68■□□□□ 0.58
SNRPEP62304 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNRPEP62304 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNRPEP62304 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SNRPEP62304 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNRPEP62304 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.68■□□□□ 0.58
SNRPEP62304 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNRPEP62304 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SNRPEP62304 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.68■□□□□ 0.58
SNRPEP62304 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SNRPEP62304 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRPEP62304 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC18.67■□□□□ 0.58
SNRPEP62304 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SNRPEP62304 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRPEP62304 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNRPEP62304 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.67■□□□□ 0.58
SNRPEP62304 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.67■□□□□ 0.58
SNRPEP62304 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.66■□□□□ 0.58
SNRPEP62304 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRPEP62304 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRPEP62304 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.66■□□□□ 0.58
SNRPEP62304 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRPEP62304 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRPEP62304 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.66■□□□□ 0.58
SNRPEP62304 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRPEP62304 EP400NL-214ENST00000641289 2402 ntBASIC18.65■□□□□ 0.58
SNRPEP62304 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRPEP62304 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.65■□□□□ 0.58
SNRPEP62304 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRPEP62304 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRPEP62304 AC022211.4-201ENST00000625094 2161 ntBASIC18.65■□□□□ 0.58
SNRPEP62304 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNRPEP62304 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SNRPEP62304 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
SNRPEP62304 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.64■□□□□ 0.57
SNRPEP62304 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNRPEP62304 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.64■□□□□ 0.57
SNRPEP62304 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SNRPEP62304 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.64■□□□□ 0.57
SNRPEP62304 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNRPEP62304 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNRPEP62304 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNRPEP62304 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNRPEP62304 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.63■□□□□ 0.57
SNRPEP62304 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.62■□□□□ 0.57
SNRPEP62304 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNRPEP62304 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.62■□□□□ 0.57
SNRPEP62304 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNRPEP62304 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms