Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61BP60468 PRTG-204ENST00000561292 833 ntTSL 3 BASIC13.02□□□□□ -0.33
SEC61BP60468 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61BP60468 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC13.02□□□□□ -0.33
SEC61BP60468 AC131212.1-201ENST00000613771 668 ntBASIC13.02□□□□□ -0.33
SEC61BP60468 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61BP60468 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61BP60468 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SEC61BP60468 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61BP60468 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61BP60468 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61BP60468 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61BP60468 GUSBP5-201ENST00000418136 578 ntBASIC13.01□□□□□ -0.33
SEC61BP60468 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SEC61BP60468 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61BP60468 OR2A1-AS1-204ENST00000470435 602 ntBASIC13.01□□□□□ -0.33
SEC61BP60468 Z92544.1-202ENST00000571933 1220 ntBASIC13.01□□□□□ -0.33
SEC61BP60468 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61BP60468 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SEC61BP60468 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61BP60468 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61BP60468 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SEC61BP60468 ABCB10P1-201ENST00000614297 2181 ntBASIC13.01□□□□□ -0.33
SEC61BP60468 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61BP60468 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61BP60468 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61BP60468 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SEC61BP60468 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC13□□□□□ -0.33
SEC61BP60468 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SEC61BP60468 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SEC61BP60468 LONRF2P2-201ENST00000439212 571 ntBASIC13□□□□□ -0.33
SEC61BP60468 KRT125P-201ENST00000546827 989 ntBASIC13□□□□□ -0.33
SEC61BP60468 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC13□□□□□ -0.33
SEC61BP60468 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC13□□□□□ -0.33
SEC61BP60468 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SEC61BP60468 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC13□□□□□ -0.33
SEC61BP60468 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SEC61BP60468 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
SEC61BP60468 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61BP60468 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61BP60468 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61BP60468 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC12.99□□□□□ -0.33
SEC61BP60468 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC12.99□□□□□ -0.33
SEC61BP60468 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC12.99□□□□□ -0.33
SEC61BP60468 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61BP60468 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SEC61BP60468 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC12.99□□□□□ -0.33
SEC61BP60468 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
SEC61BP60468 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61BP60468 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61BP60468 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
SEC61BP60468 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61BP60468 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61BP60468 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61BP60468 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61BP60468 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC12.98□□□□□ -0.33
SEC61BP60468 BX664725.1-201ENST00000438252 379 ntBASIC12.98□□□□□ -0.33
SEC61BP60468 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61BP60468 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC12.98□□□□□ -0.33
SEC61BP60468 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC12.98□□□□□ -0.33
SEC61BP60468 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
SEC61BP60468 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61BP60468 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61BP60468 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61BP60468 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SEC61BP60468 AC239859.2-201ENST00000444165 318 ntBASIC12.97□□□□□ -0.33
SEC61BP60468 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61BP60468 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61BP60468 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC61BP60468 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC61BP60468 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC61BP60468 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC12.96□□□□□ -0.33
SEC61BP60468 THA1P-201ENST00000590384 1145 ntBASIC12.96□□□□□ -0.33
SEC61BP60468 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SEC61BP60468 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61BP60468 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SEC61BP60468 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC12.95□□□□□ -0.34
SEC61BP60468 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61BP60468 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC12.95□□□□□ -0.34
SEC61BP60468 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61BP60468 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61BP60468 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61BP60468 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61BP60468 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61BP60468 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61BP60468 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC12.94□□□□□ -0.34
SEC61BP60468 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61BP60468 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SEC61BP60468 ST7-205ENST00000393446 2114 ntTSL 5 BASIC12.94□□□□□ -0.34
SEC61BP60468 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61BP60468 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SEC61BP60468 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
SEC61BP60468 AL356441.2-201ENST00000443009 864 ntBASIC12.94□□□□□ -0.34
SEC61BP60468 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC12.94□□□□□ -0.34
SEC61BP60468 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61BP60468 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61BP60468 AL449106.1-201ENST00000608517 1980 ntBASIC12.94□□□□□ -0.34
SEC61BP60468 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SEC61BP60468 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61BP60468 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms