Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
CDR1P51861 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CDR1P51861 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDR1P51861 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.17■■□□□ 1.78
CDR1P51861 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.17■■□□□ 1.78
CDR1P51861 AC026202.3-201ENST00000600805 1127 ntBASIC26.17■■□□□ 1.78
CDR1P51861 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
CDR1P51861 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDR1P51861 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDR1P51861 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CDR1P51861 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDR1P51861 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDR1P51861 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CDR1P51861 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CDR1P51861 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CDR1P51861 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.16■■□□□ 1.78
CDR1P51861 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.16■■□□□ 1.78
CDR1P51861 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.16■■□□□ 1.78
CDR1P51861 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDR1P51861 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDR1P51861 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
CDR1P51861 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
CDR1P51861 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.15■■□□□ 1.78
CDR1P51861 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.14■■□□□ 1.78
CDR1P51861 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.14■■□□□ 1.78
CDR1P51861 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
CDR1P51861 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDR1P51861 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDR1P51861 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CDR1P51861 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDR1P51861 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CDR1P51861 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.14■■□□□ 1.77
CDR1P51861 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
CDR1P51861 ATP5G2P3-201ENST00000429083 425 ntBASIC26.13■■□□□ 1.77
CDR1P51861 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CDR1P51861 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDR1P51861 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.13■■□□□ 1.77
CDR1P51861 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
CDR1P51861 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
CDR1P51861 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
CDR1P51861 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
CDR1P51861 RP9P-202ENST00000450133 1212 ntBASIC26.12■■□□□ 1.77
CDR1P51861 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CDR1P51861 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CDR1P51861 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CDR1P51861 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.11■■□□□ 1.77
CDR1P51861 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
CDR1P51861 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CDR1P51861 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CDR1P51861 AC129492.7-201ENST00000622992 756 ntBASIC26.11■■□□□ 1.77
CDR1P51861 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CDR1P51861 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.1■■□□□ 1.77
CDR1P51861 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
CDR1P51861 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CDR1P51861 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.1■■□□□ 1.77
CDR1P51861 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.1■■□□□ 1.77
CDR1P51861 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CDR1P51861 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
CDR1P51861 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CDR1P51861 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
CDR1P51861 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CDR1P51861 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CDR1P51861 TSPY13P-201ENST00000338964 914 ntBASIC26.08■■□□□ 1.77
CDR1P51861 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.08■■□□□ 1.77
CDR1P51861 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CDR1P51861 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CDR1P51861 SPCS2P3-201ENST00000500401 656 ntBASIC26.07■■□□□ 1.76
CDR1P51861 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
CDR1P51861 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CDR1P51861 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CDR1P51861 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDR1P51861 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDR1P51861 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.06■■□□□ 1.76
CDR1P51861 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CDR1P51861 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CDR1P51861 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
CDR1P51861 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.04■■□□□ 1.76
CDR1P51861 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.04■■□□□ 1.76
CDR1P51861 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.04■■□□□ 1.76
CDR1P51861 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.04■■□□□ 1.76
CDR1P51861 RAP2CP1-202ENST00000605179 643 ntBASIC26.04■■□□□ 1.76
CDR1P51861 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.04■■□□□ 1.76
CDR1P51861 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDR1P51861 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.04■■□□□ 1.76
CDR1P51861 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDR1P51861 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CDR1P51861 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.03■■□□□ 1.76
CDR1P51861 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDR1P51861 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDR1P51861 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
CDR1P51861 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDR1P51861 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.02■■□□□ 1.76
CDR1P51861 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.02■■□□□ 1.76
CDR1P51861 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.02■■□□□ 1.76
CDR1P51861 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDR1P51861 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDR1P51861 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDR1P51861 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.02■■□□□ 1.76
CDR1P51861 DUX4L9-201ENST00000449051 1259 ntBASIC26.02■■□□□ 1.76
CDR1P51861 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.02■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms