Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDC34P49427 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.97■□□□□ 0.63
CDC34P49427 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.97■□□□□ 0.63
CDC34P49427 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.97■□□□□ 0.63
CDC34P49427 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.97■□□□□ 0.63
CDC34P49427 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDC34P49427 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC34P49427 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC34P49427 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC34P49427 AC012676.1-201ENST00000574705 1949 ntBASIC18.96■□□□□ 0.63
CDC34P49427 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDC34P49427 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CDC34P49427 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.95■□□□□ 0.62
CDC34P49427 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC34P49427 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
CDC34P49427 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.95■□□□□ 0.62
CDC34P49427 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDC34P49427 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC34P49427 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.95■□□□□ 0.62
CDC34P49427 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.94■□□□□ 0.62
CDC34P49427 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC34P49427 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDC34P49427 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC34P49427 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.94■□□□□ 0.62
CDC34P49427 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.94■□□□□ 0.62
CDC34P49427 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.94■□□□□ 0.62
CDC34P49427 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDC34P49427 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.93■□□□□ 0.62
CDC34P49427 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC34P49427 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC34P49427 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDC34P49427 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.93■□□□□ 0.62
CDC34P49427 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC34P49427 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC34P49427 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC34P49427 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDC34P49427 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDC34P49427 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CDC34P49427 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC34P49427 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CDC34P49427 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.92■□□□□ 0.62
CDC34P49427 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.92■□□□□ 0.62
CDC34P49427 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CDC34P49427 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC34P49427 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC34P49427 AC110285.7-201ENST00000624417 1536 ntBASIC18.91■□□□□ 0.62
CDC34P49427 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.91■□□□□ 0.62
CDC34P49427 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.91■□□□□ 0.62
CDC34P49427 AC136428.2-201ENST00000563187 214 ntBASIC18.91■□□□□ 0.62
CDC34P49427 MIR6090-201ENST00000622481 60 ntBASIC18.91■□□□□ 0.62
CDC34P49427 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDC34P49427 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC34P49427 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC34P49427 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CDC34P49427 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC34P49427 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC34P49427 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CDC34P49427 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDC34P49427 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
CDC34P49427 AC005559.1-201ENST00000589661 871 ntBASIC18.9■□□□□ 0.62
CDC34P49427 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CDC34P49427 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDC34P49427 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDC34P49427 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDC34P49427 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CDC34P49427 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDC34P49427 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDC34P49427 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CDC34P49427 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDC34P49427 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.89■□□□□ 0.61
CDC34P49427 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.89■□□□□ 0.61
CDC34P49427 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDC34P49427 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDC34P49427 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.89■□□□□ 0.61
CDC34P49427 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDC34P49427 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDC34P49427 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDC34P49427 LINC01124-201ENST00000409786 2117 ntBASIC18.88■□□□□ 0.61
CDC34P49427 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDC34P49427 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDC34P49427 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDC34P49427 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.88■□□□□ 0.61
CDC34P49427 AC097358.2-201ENST00000607541 1159 ntBASIC18.88■□□□□ 0.61
CDC34P49427 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDC34P49427 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDC34P49427 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDC34P49427 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.88■□□□□ 0.61
CDC34P49427 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDC34P49427 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDC34P49427 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDC34P49427 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDC34P49427 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDC34P49427 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDC34P49427 AC096887.2-201ENST00000623443 1957 ntBASIC18.87■□□□□ 0.61
CDC34P49427 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.87■□□□□ 0.61
CDC34P49427 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC34P49427 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC34P49427 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDC34P49427 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC34P49427 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms