Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 AC018755.3-202ENST00000596210 929 ntBASIC20.49■□□□□ 0.87
TNFRSF1AP19438 AC129492.7-201ENST00000622992 756 ntBASIC20.49■□□□□ 0.87
TNFRSF1AP19438 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.49■□□□□ 0.87
TNFRSF1AP19438 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.49■□□□□ 0.87
TNFRSF1AP19438 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TNFRSF1AP19438 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNFRSF1AP19438 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFRSF1AP19438 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF1AP19438 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF1AP19438 KRT18P10-201ENST00000388836 1287 ntBASIC20.48■□□□□ 0.87
TNFRSF1AP19438 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF1AP19438 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.48■□□□□ 0.87
TNFRSF1AP19438 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.48■□□□□ 0.87
TNFRSF1AP19438 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF1AP19438 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF1AP19438 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF1AP19438 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF1AP19438 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.47■□□□□ 0.87
TNFRSF1AP19438 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF1AP19438 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF1AP19438 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TNFRSF1AP19438 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TNFRSF1AP19438 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TNFRSF1AP19438 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF1AP19438 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TNFRSF1AP19438 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF1AP19438 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF1AP19438 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.46■□□□□ 0.87
TNFRSF1AP19438 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.46■□□□□ 0.87
TNFRSF1AP19438 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF1AP19438 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFRSF1AP19438 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFRSF1AP19438 TSPY13P-201ENST00000338964 914 ntBASIC20.45■□□□□ 0.86
TNFRSF1AP19438 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.45■□□□□ 0.86
TNFRSF1AP19438 MIR6765-201ENST00000614092 87 ntBASIC20.45■□□□□ 0.86
TNFRSF1AP19438 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFRSF1AP19438 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.45■□□□□ 0.86
TNFRSF1AP19438 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF1AP19438 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF1AP19438 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF1AP19438 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF1AP19438 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF1AP19438 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF1AP19438 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.44■□□□□ 0.86
TNFRSF1AP19438 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF1AP19438 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF1AP19438 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF1AP19438 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF1AP19438 ATP5G2P3-201ENST00000429083 425 ntBASIC20.43■□□□□ 0.86
TNFRSF1AP19438 DUX4L9-201ENST00000449051 1259 ntBASIC20.43■□□□□ 0.86
TNFRSF1AP19438 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF1AP19438 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.43■□□□□ 0.86
TNFRSF1AP19438 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF1AP19438 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.42■□□□□ 0.86
TNFRSF1AP19438 AC004987.1-201ENST00000428627 508 ntBASIC20.42■□□□□ 0.86
TNFRSF1AP19438 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF1AP19438 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF1AP19438 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF1AP19438 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF1AP19438 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.41■□□□□ 0.86
TNFRSF1AP19438 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF1AP19438 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.41■□□□□ 0.86
TNFRSF1AP19438 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.41■□□□□ 0.86
TNFRSF1AP19438 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TNFRSF1AP19438 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.41■□□□□ 0.86
TNFRSF1AP19438 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF1AP19438 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TNFRSF1AP19438 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TNFRSF1AP19438 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TNFRSF1AP19438 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TNFRSF1AP19438 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.4■□□□□ 0.86
TNFRSF1AP19438 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TNFRSF1AP19438 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
TNFRSF1AP19438 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.39■□□□□ 0.86
TNFRSF1AP19438 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TNFRSF1AP19438 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.39■□□□□ 0.85
TNFRSF1AP19438 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TNFRSF1AP19438 AL033527.3-201ENST00000566366 1196 ntBASIC20.39■□□□□ 0.85
TNFRSF1AP19438 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.39■□□□□ 0.85
TNFRSF1AP19438 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.39■□□□□ 0.85
TNFRSF1AP19438 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.38■□□□□ 0.85
TNFRSF1AP19438 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFRSF1AP19438 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFRSF1AP19438 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFRSF1AP19438 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFRSF1AP19438 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
TNFRSF1AP19438 SPCS2P3-201ENST00000500401 656 ntBASIC20.38■□□□□ 0.85
TNFRSF1AP19438 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.38■□□□□ 0.85
TNFRSF1AP19438 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.38■□□□□ 0.85
TNFRSF1AP19438 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFRSF1AP19438 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
TNFRSF1AP19438 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
TNFRSF1AP19438 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.37■□□□□ 0.85
TNFRSF1AP19438 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TNFRSF1AP19438 DUX4L18-201ENST00000553347 1267 ntBASIC20.37■□□□□ 0.85
TNFRSF1AP19438 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFRSF1AP19438 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TNFRSF1AP19438 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFRSF1AP19438 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFRSF1AP19438 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms