Protein–RNA interactions for Protein: O60516

EIF4EBP3, Eukaryotic translation initiation factor 4E-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4EBP3O60516 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EIF4EBP3O60516 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EIF4EBP3O60516 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EIF4EBP3O60516 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.16■□□□□ 0.18
EIF4EBP3O60516 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
EIF4EBP3O60516 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EIF4EBP3O60516 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EIF4EBP3O60516 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
EIF4EBP3O60516 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
EIF4EBP3O60516 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.16■□□□□ 0.18
EIF4EBP3O60516 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.16■□□□□ 0.18
EIF4EBP3O60516 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
EIF4EBP3O60516 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EIF4EBP3O60516 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
EIF4EBP3O60516 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC16.15■□□□□ 0.18
EIF4EBP3O60516 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EIF4EBP3O60516 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.15■□□□□ 0.18
EIF4EBP3O60516 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC16.15■□□□□ 0.18
EIF4EBP3O60516 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EIF4EBP3O60516 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EIF4EBP3O60516 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.15■□□□□ 0.18
EIF4EBP3O60516 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EIF4EBP3O60516 LINC01124-201ENST00000409786 2117 ntBASIC16.15■□□□□ 0.18
EIF4EBP3O60516 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
EIF4EBP3O60516 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
EIF4EBP3O60516 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
EIF4EBP3O60516 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
EIF4EBP3O60516 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
EIF4EBP3O60516 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
EIF4EBP3O60516 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
EIF4EBP3O60516 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.13■□□□□ 0.17
EIF4EBP3O60516 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
EIF4EBP3O60516 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
EIF4EBP3O60516 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EIF4EBP3O60516 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
EIF4EBP3O60516 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EIF4EBP3O60516 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
EIF4EBP3O60516 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC16.13■□□□□ 0.17
EIF4EBP3O60516 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
EIF4EBP3O60516 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC16.12■□□□□ 0.17
EIF4EBP3O60516 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EIF4EBP3O60516 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EIF4EBP3O60516 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EIF4EBP3O60516 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EIF4EBP3O60516 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EIF4EBP3O60516 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EIF4EBP3O60516 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
EIF4EBP3O60516 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EIF4EBP3O60516 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EIF4EBP3O60516 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
EIF4EBP3O60516 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.11■□□□□ 0.17
EIF4EBP3O60516 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EIF4EBP3O60516 DUSP8P5-201ENST00000422884 1815 ntBASIC16.11■□□□□ 0.17
EIF4EBP3O60516 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EIF4EBP3O60516 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
EIF4EBP3O60516 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EIF4EBP3O60516 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.11■□□□□ 0.17
EIF4EBP3O60516 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.11■□□□□ 0.17
EIF4EBP3O60516 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC16.1■□□□□ 0.17
EIF4EBP3O60516 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
EIF4EBP3O60516 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EIF4EBP3O60516 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EIF4EBP3O60516 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC16.1■□□□□ 0.17
EIF4EBP3O60516 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EIF4EBP3O60516 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC16.1■□□□□ 0.17
EIF4EBP3O60516 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EIF4EBP3O60516 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EIF4EBP3O60516 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
EIF4EBP3O60516 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.09■□□□□ 0.17
EIF4EBP3O60516 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC16.09■□□□□ 0.17
EIF4EBP3O60516 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC16.09■□□□□ 0.17
EIF4EBP3O60516 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EIF4EBP3O60516 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
EIF4EBP3O60516 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
EIF4EBP3O60516 WHAMMP3-201ENST00000611636 1609 ntBASIC16.08■□□□□ 0.17
EIF4EBP3O60516 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
EIF4EBP3O60516 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
EIF4EBP3O60516 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
EIF4EBP3O60516 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EIF4EBP3O60516 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
EIF4EBP3O60516 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EIF4EBP3O60516 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
EIF4EBP3O60516 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
EIF4EBP3O60516 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
EIF4EBP3O60516 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EIF4EBP3O60516 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.08■□□□□ 0.16
EIF4EBP3O60516 AC096887.2-201ENST00000623443 1957 ntBASIC16.07■□□□□ 0.16
EIF4EBP3O60516 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
EIF4EBP3O60516 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.07■□□□□ 0.16
EIF4EBP3O60516 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
EIF4EBP3O60516 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
EIF4EBP3O60516 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EIF4EBP3O60516 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EIF4EBP3O60516 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EIF4EBP3O60516 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EIF4EBP3O60516 C9orf163-202ENST00000624034 2573 ntBASIC16.07■□□□□ 0.16
EIF4EBP3O60516 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
EIF4EBP3O60516 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EIF4EBP3O60516 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
EIF4EBP3O60516 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms