Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
FOXN1O15353 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
FOXN1O15353 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
FOXN1O15353 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
FOXN1O15353 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
FOXN1O15353 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
FOXN1O15353 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
FOXN1O15353 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC29.08■■■□□ 2.25
FOXN1O15353 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC29.08■■■□□ 2.25
FOXN1O15353 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
FOXN1O15353 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC29.07■■■□□ 2.24
FOXN1O15353 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC29.07■■■□□ 2.24
FOXN1O15353 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC29.07■■■□□ 2.24
FOXN1O15353 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC29.07■■■□□ 2.24
FOXN1O15353 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC29.07■■■□□ 2.24
FOXN1O15353 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC29.07■■■□□ 2.24
FOXN1O15353 AL359258.2-201ENST00000564063 1566 ntBASIC29.07■■■□□ 2.24
FOXN1O15353 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
FOXN1O15353 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
FOXN1O15353 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC29.06■■■□□ 2.24
FOXN1O15353 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
FOXN1O15353 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
FOXN1O15353 ZNRF2P3-201ENST00000424200 374 ntBASIC29.06■■■□□ 2.24
FOXN1O15353 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC29.06■■■□□ 2.24
FOXN1O15353 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC29.06■■■□□ 2.24
FOXN1O15353 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC29.06■■■□□ 2.24
FOXN1O15353 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC29.06■■■□□ 2.24
FOXN1O15353 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
FOXN1O15353 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
FOXN1O15353 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
FOXN1O15353 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
FOXN1O15353 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC29.05■■■□□ 2.24
FOXN1O15353 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
FOXN1O15353 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC29.05■■■□□ 2.24
FOXN1O15353 AL136116.3-201ENST00000402907 1138 ntBASIC29.05■■■□□ 2.24
FOXN1O15353 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
FOXN1O15353 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
FOXN1O15353 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
FOXN1O15353 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC29.03■■■□□ 2.24
FOXN1O15353 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
FOXN1O15353 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC29.03■■■□□ 2.24
FOXN1O15353 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC29.03■■■□□ 2.24
FOXN1O15353 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC29.03■■■□□ 2.24
FOXN1O15353 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC29.02■■■□□ 2.24
FOXN1O15353 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC29.02■■■□□ 2.24
FOXN1O15353 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
FOXN1O15353 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC29.02■■■□□ 2.24
FOXN1O15353 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
FOXN1O15353 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC29.02■■■□□ 2.24
FOXN1O15353 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.01■■■□□ 2.23
FOXN1O15353 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC29.01■■■□□ 2.23
FOXN1O15353 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC29.01■■■□□ 2.23
FOXN1O15353 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
FOXN1O15353 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29■■■□□ 2.23
FOXN1O15353 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.99■■■□□ 2.23
FOXN1O15353 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
FOXN1O15353 AC019171.1-201ENST00000601251 1056 ntBASIC28.99■■■□□ 2.23
FOXN1O15353 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
FOXN1O15353 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.99■■■□□ 2.23
FOXN1O15353 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.98■■■□□ 2.23
FOXN1O15353 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
FOXN1O15353 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
FOXN1O15353 EBPL-204ENST00000378272 766 ntTSL 3 BASIC28.98■■■□□ 2.23
FOXN1O15353 RPP21-222ENST00000433076 577 ntTSL 2 BASIC28.98■■■□□ 2.23
FOXN1O15353 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
FOXN1O15353 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC28.98■■■□□ 2.23
FOXN1O15353 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
FOXN1O15353 AC096631.2-201ENST00000436136 790 ntBASIC28.97■■■□□ 2.23
FOXN1O15353 BX664725.1-201ENST00000438252 379 ntBASIC28.97■■■□□ 2.23
FOXN1O15353 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC28.97■■■□□ 2.23
FOXN1O15353 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC28.97■■■□□ 2.23
FOXN1O15353 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC28.97■■■□□ 2.23
FOXN1O15353 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
FOXN1O15353 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC28.96■■■□□ 2.23
FOXN1O15353 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
FOXN1O15353 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
FOXN1O15353 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
FOXN1O15353 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC28.96■■■□□ 2.23
FOXN1O15353 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC28.96■■■□□ 2.23
FOXN1O15353 SRR-208ENST00000576848 588 ntTSL 4 BASIC28.96■■■□□ 2.23
FOXN1O15353 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.96■■■□□ 2.23
FOXN1O15353 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
FOXN1O15353 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC28.95■■■□□ 2.22
FOXN1O15353 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC28.95■■■□□ 2.22
FOXN1O15353 MIR5787-201ENST00000611784 55 ntBASIC28.95■■■□□ 2.22
FOXN1O15353 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
FOXN1O15353 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
FOXN1O15353 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
FOXN1O15353 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
FOXN1O15353 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.94■■■□□ 2.22
FOXN1O15353 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
FOXN1O15353 MIR3960-201ENST00000583311 91 ntBASIC28.94■■■□□ 2.22
FOXN1O15353 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC28.94■■■□□ 2.22
FOXN1O15353 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
FOXN1O15353 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
FOXN1O15353 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
FOXN1O15353 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.93■■■□□ 2.22
FOXN1O15353 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC28.93■■■□□ 2.22
FOXN1O15353 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.93■■■□□ 2.22
FOXN1O15353 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms