Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTCAO00442 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RTCAO00442 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.09■■□□□ 1.29
RTCAO00442 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.09■■□□□ 1.29
RTCAO00442 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTCAO00442 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.08■■□□□ 1.29
RTCAO00442 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.08■■□□□ 1.29
RTCAO00442 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.08■■□□□ 1.29
RTCAO00442 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.08■■□□□ 1.29
RTCAO00442 MIR3960-201ENST00000583311 91 ntBASIC23.08■■□□□ 1.29
RTCAO00442 HSD17B1P1-201ENST00000590052 955 ntBASIC23.08■■□□□ 1.29
RTCAO00442 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
RTCAO00442 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTCAO00442 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RTCAO00442 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.07■■□□□ 1.28
RTCAO00442 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
RTCAO00442 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RTCAO00442 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.06■■□□□ 1.28
RTCAO00442 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTCAO00442 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTCAO00442 RNF126P1-201ENST00000567452 1320 ntBASIC23.06■■□□□ 1.28
RTCAO00442 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RTCAO00442 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTCAO00442 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTCAO00442 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.05■■□□□ 1.28
RTCAO00442 AC007029.1-201ENST00000604183 313 ntBASIC23.05■■□□□ 1.28
RTCAO00442 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTCAO00442 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTCAO00442 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.05■■□□□ 1.28
RTCAO00442 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.05■■□□□ 1.28
RTCAO00442 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTCAO00442 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTCAO00442 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
RTCAO00442 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTCAO00442 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RTCAO00442 RP9P-202ENST00000450133 1212 ntBASIC23.04■■□□□ 1.28
RTCAO00442 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RTCAO00442 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTCAO00442 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTCAO00442 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RTCAO00442 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
RTCAO00442 AC010501.1-201ENST00000606270 1962 ntBASIC23.03■■□□□ 1.28
RTCAO00442 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
RTCAO00442 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.03■■□□□ 1.28
RTCAO00442 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTCAO00442 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.03■■□□□ 1.28
RTCAO00442 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTCAO00442 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTCAO00442 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTCAO00442 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTCAO00442 AC093536.1-201ENST00000569153 554 ntBASIC23.02■■□□□ 1.28
RTCAO00442 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTCAO00442 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RTCAO00442 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTCAO00442 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTCAO00442 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RTCAO00442 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTCAO00442 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
RTCAO00442 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTCAO00442 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23■■□□□ 1.27
RTCAO00442 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RTCAO00442 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RTCAO00442 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
RTCAO00442 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RTCAO00442 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.99■■□□□ 1.27
RTCAO00442 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTCAO00442 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RTCAO00442 AC096887.2-201ENST00000623443 1957 ntBASIC22.99■■□□□ 1.27
RTCAO00442 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTCAO00442 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RTCAO00442 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
RTCAO00442 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
RTCAO00442 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.98■■□□□ 1.27
RTCAO00442 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTCAO00442 RARRES2P2-201ENST00000394842 485 ntBASIC22.98■■□□□ 1.27
RTCAO00442 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
RTCAO00442 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTCAO00442 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RTCAO00442 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.98■■□□□ 1.27
RTCAO00442 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTCAO00442 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTCAO00442 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
RTCAO00442 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RTCAO00442 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
RTCAO00442 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RTCAO00442 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RTCAO00442 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RTCAO00442 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.97■■□□□ 1.27
RTCAO00442 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RTCAO00442 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
RTCAO00442 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RTCAO00442 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.96■■□□□ 1.27
RTCAO00442 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.96■■□□□ 1.27
RTCAO00442 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.95■■□□□ 1.26
RTCAO00442 AC026202.3-201ENST00000600805 1127 ntBASIC22.95■■□□□ 1.26
RTCAO00442 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RTCAO00442 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RTCAO00442 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.94■■□□□ 1.26
RTCAO00442 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RTCAO00442 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms