Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 DHDDS-223ENST00000531312 496 ntTSL 48.37□□□□□ -1.072e-6■□□□□ 8.5
SRSF1Q07955 DHDDS-225ENST00000533087 582 ntTSL 58.37□□□□□ -1.072e-6■□□□□ 8.5
SRSF1Q07955 DHDDS-207ENST00000430232 703 ntTSL 28.23□□□□□ -1.092e-6■□□□□ 8.5
SRSF1Q07955 ZNF544-215ENST00000599953 2274 ntTSL 5 BASIC8.21□□□□□ -1.12e-6■□□□□ 8.5
SRSF1Q07955 DHDDS-218ENST00000526278 548 ntTSL 47.94□□□□□ -1.142e-6■□□□□ 8.5
SRSF1Q07955 DHDDS-202ENST00000360009 3245 ntAPPRIS P4 TSL 2 BASIC7.92□□□□□ -1.142e-6■□□□□ 8.5
SRSF1Q07955 DHDDS-222ENST00000530781 556 ntTSL 47.69□□□□□ -1.182e-6■□□□□ 8.5
SRSF1Q07955 DHDDS-209ENST00000434391 3338 ntTSL 1 (best)7.12□□□□□ -1.272e-6■□□□□ 8.5
SRSF1Q07955 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.352e-6■□□□□ 8.5
SRSF1Q07955 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC6.18□□□□□ -1.422e-6■□□□□ 8.5
SRSF1Q07955 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.432e-6■□□□□ 8.5
SRSF1Q07955 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.432e-6■□□□□ 8.5
SRSF1Q07955 DHDDS-224ENST00000531955 559 ntTSL 55.81□□□□□ -1.482e-6■□□□□ 8.5
SRSF1Q07955 ZNF544-207ENST00000596677 4109 ntTSL 55.67□□□□□ -1.52e-6■□□□□ 8.5
SRSF1Q07955 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.84□□□□□ -1.962e-6■□□□□ 8.5
SRSF1Q07955 RHBG-201ENST00000451864 1927 ntTSL 217.69■□□□□ 0.422e-7■□□□□ 8.5
SRSF1Q07955 RHBG-208ENST00000620376 1984 ntTSL 217.61■□□□□ 0.412e-7■□□□□ 8.5
SRSF1Q07955 RHBG-205ENST00000612897 1862 ntTSL 1 (best)13.42□□□□□ -0.262e-7■□□□□ 8.5
SRSF1Q07955 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.272e-7■□□□□ 8.5
SRSF1Q07955 RHBG-206ENST00000613460 1912 ntTSL 1 (best)12.43□□□□□ -0.422e-7■□□□□ 8.5
SRSF1Q07955 RHBG-207ENST00000618120 2424 ntTSL 211.46□□□□□ -0.582e-7■□□□□ 8.5
SRSF1Q07955 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.25■□□□□ 0.195e-9■□□□□ 8.5
SRSF1Q07955 EIF3B-204ENST00000431643 1074 ntTSL 515.81■□□□□ 0.125e-9■□□□□ 8.5
SRSF1Q07955 NCLN-203ENST00000587740 1210 ntTSL 1 (best)15.8■□□□□ 0.125e-9■□□□□ 8.5
SRSF1Q07955 NCLN-202ENST00000586904 836 ntTSL 515.26■□□□□ 0.035e-9■□□□□ 8.5
SRSF1Q07955 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.15e-9■□□□□ 8.5
SRSF1Q07955 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.235e-9■□□□□ 8.5
SRSF1Q07955 NCLN-208ENST00000592737 2735 ntTSL 313.19□□□□□ -0.35e-9■□□□□ 8.5
SRSF1Q07955 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.695e-9■□□□□ 8.5
SRSF1Q07955 EIF3B-209ENST00000468250 602 ntTSL 27.52□□□□□ -1.215e-9■□□□□ 8.5
SRSF1Q07955 EIF3B-205ENST00000463026 633 ntTSL 26.94□□□□□ -1.35e-9■□□□□ 8.5
SRSF1Q07955 NUP98-208ENST00000461047 545 ntTSL 35.13□□□□□ -1.595e-9■□□□□ 8.5
SRSF1Q07955 EIF3B-206ENST00000463229 552 ntTSL 54.35□□□□□ -1.715e-9■□□□□ 8.5
SRSF1Q07955 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.122e-7■□□□□ 8.5
SRSF1Q07955 USP7-208ENST00000563961 4533 ntTSL 511.23□□□□□ -0.612e-7■□□□□ 8.5
SRSF1Q07955 USP7-203ENST00000542333 1966 ntTSL 27.8□□□□□ -1.162e-7■□□□□ 8.5
SRSF1Q07955 USP7-207ENST00000563085 3194 ntTSL 25.44□□□□□ -1.542e-7■□□□□ 8.5
SRSF1Q07955 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.81□□□□□ -1.642e-7■□□□□ 8.5
SRSF1Q07955 USP7-210ENST00000565455 3554 ntTSL 24.34□□□□□ -1.712e-7■□□□□ 8.5
SRSF1Q07955 ICAM5-203ENST00000586480 2599 ntTSL 1 (best)16.76■□□□□ 0.275e-6■□□□□ 8.5
SRSF1Q07955 ZGPAT-211ENST00000484569 749 ntTSL 217.2■□□□□ 0.342e-8■□□□□ 8.5
SRSF1Q07955 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.462e-8■□□□□ 8.5
SRSF1Q07955 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.472e-8■□□□□ 8.5
SRSF1Q07955 SPG7-209ENST00000564047 422 ntTSL 211.85□□□□□ -0.512e-8■□□□□ 8.5
SRSF1Q07955 DDX41-218ENST00000625286 150 ntTSL 5 BASIC11.09□□□□□ -0.632e-8■□□□□ 8.5
SRSF1Q07955 KIFC2-203ENST00000529864 320 ntTSL 517.5■□□□□ 0.391e-7■□□□□ 8.5
SRSF1Q07955 SURF6-202ENST00000468290 935 ntTSL 217.43■□□□□ 0.381e-7■□□□□ 8.5
SRSF1Q07955 CDC45-204ENST00000428937 577 ntTSL 516.34■□□□□ 0.211e-7■□□□□ 8.5
SRSF1Q07955 CDC45-210ENST00000487669 736 ntTSL 314.6□□□□□ -0.071e-7■□□□□ 8.5
SRSF1Q07955 PABPC4-219ENST00000525045 765 ntTSL 214.11□□□□□ -0.151e-7■□□□□ 8.5
SRSF1Q07955 PABPC4-208ENST00000461578 193 ntTSL 514.09□□□□□ -0.151e-7■□□□□ 8.5
SRSF1Q07955 PABPC4-212ENST00000477556 413 ntTSL 312.86□□□□□ -0.351e-7■□□□□ 8.5
SRSF1Q07955 PABPC4-206ENST00000437136 876 ntTSL 512.63□□□□□ -0.391e-7■□□□□ 8.5
SRSF1Q07955 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.391e-7■□□□□ 8.5
SRSF1Q07955 PABPC4-205ENST00000421687 1663 ntTSL 512.32□□□□□ -0.441e-7■□□□□ 8.5
SRSF1Q07955 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.771e-7■□□□□ 8.5
SRSF1Q07955 PABPC4-214ENST00000483770 476 ntTSL 28.8□□□□□ -11e-7■□□□□ 8.5
SRSF1Q07955 PABPC4-220ENST00000525669 582 ntTSL 27.32□□□□□ -1.241e-7■□□□□ 8.5
SRSF1Q07955 PABPC4-209ENST00000468476 3592 ntTSL 27.18□□□□□ -1.261e-7■□□□□ 8.5
SRSF1Q07955 PABPC4-222ENST00000527718 746 ntTSL 55.06□□□□□ -1.61e-7■□□□□ 8.5
SRSF1Q07955 WNK4-205ENST00000592072 1613 ntTSL 218.23■□□□□ 0.519e-9■□□□□ 8.5
SRSF1Q07955 WNK4-202ENST00000587705 586 ntTSL 415.46■□□□□ 0.079e-9■□□□□ 8.5
SRSF1Q07955 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC10.11□□□□□ -0.794e-8■□□□□ 8.5
SRSF1Q07955 TPX2-201ENST00000300403 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.934e-8■□□□□ 8.5
SRSF1Q07955 SRSF4-202ENST00000466448 1264 ntAPPRIS ALT2 TSL 318.69■□□□□ 0.584e-9■□□□□ 8.5
SRSF1Q07955 SRSF4-206ENST00000605204 1399 ntTSL 1 (best)18.17■□□□□ 0.54e-9■□□□□ 8.5
SRSF1Q07955 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.114e-9■□□□□ 8.5
SRSF1Q07955 RSAD1-208ENST00000515221 1029 ntTSL 219.96■□□□□ 0.792e-6■□□□□ 8.5
SRSF1Q07955 MAD1L1-205ENST00000421113 564 ntTSL 419.48■□□□□ 0.712e-6■□□□□ 8.5
SRSF1Q07955 EHBP1-216ENST00000471179 588 ntTSL 218.81■□□□□ 0.62e-6■□□□□ 8.5
SRSF1Q07955 MAD1L1-220ENST00000483165 603 ntTSL 417.49■□□□□ 0.392e-6■□□□□ 8.5
SRSF1Q07955 RSAD1-203ENST00000504284 1064 ntTSL 516.77■□□□□ 0.282e-6■□□□□ 8.5
SRSF1Q07955 CEP250-208ENST00000446710 868 ntTSL 1 (best)15.97■□□□□ 0.152e-6■□□□□ 8.5
SRSF1Q07955 RSAD1-204ENST00000506211 930 ntTSL 314.95□□□□□ -0.022e-6■□□□□ 8.5
SRSF1Q07955 MAD1L1-215ENST00000464742 449 ntTSL 514.62□□□□□ -0.072e-6■□□□□ 8.5
SRSF1Q07955 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.082e-6■□□□□ 8.5
SRSF1Q07955 MAD1L1-210ENST00000444373 535 ntTSL 414.18□□□□□ -0.142e-6■□□□□ 8.5
SRSF1Q07955 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.232e-6■□□□□ 8.5
SRSF1Q07955 QARS-231ENST00000634602 544 ntTSL 413.56□□□□□ -0.242e-6■□□□□ 8.5
SRSF1Q07955 QARS-237ENST00000635194 582 ntTSL 512.98□□□□□ -0.332e-6■□□□□ 8.5
SRSF1Q07955 MAD1L1-209ENST00000438959 839 ntTSL 312.94□□□□□ -0.342e-6■□□□□ 8.5
SRSF1Q07955 MAD1L1-222ENST00000491858 494 ntTSL 412.69□□□□□ -0.382e-6■□□□□ 8.5
SRSF1Q07955 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC12.65□□□□□ -0.382e-6■□□□□ 8.5
SRSF1Q07955 QARS-232ENST00000634609 553 ntTSL 1 (best)12.47□□□□□ -0.412e-6■□□□□ 8.5
SRSF1Q07955 QARS-235ENST00000634953 583 ntTSL 412.44□□□□□ -0.422e-6■□□□□ 8.5
SRSF1Q07955 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.462e-6■□□□□ 8.5
SRSF1Q07955 CEP250-203ENST00000420564 702 ntTSL 512.17□□□□□ -0.462e-6■□□□□ 8.5
SRSF1Q07955 QARS-245ENST00000635541 907 ntTSL 312.12□□□□□ -0.472e-6■□□□□ 8.5
SRSF1Q07955 QARS-217ENST00000482261 1149 ntTSL 512.06□□□□□ -0.482e-6■□□□□ 8.5
SRSF1Q07955 QARS-221ENST00000494767 1023 ntTSL 512.06□□□□□ -0.482e-6■□□□□ 8.5
SRSF1Q07955 QARS-239ENST00000635278 597 ntTSL 212.06□□□□□ -0.482e-6■□□□□ 8.5
SRSF1Q07955 RSAD1-207ENST00000513650 637 ntTSL 211.86□□□□□ -0.512e-6■□□□□ 8.5
SRSF1Q07955 QARS-233ENST00000634724 754 ntTSL 211.58□□□□□ -0.562e-6■□□□□ 8.5
SRSF1Q07955 QARS-241ENST00000635375 947 ntTSL 311.38□□□□□ -0.592e-6■□□□□ 8.5
SRSF1Q07955 QARS-204ENST00000418549 558 ntTSL 411.33□□□□□ -0.62e-6■□□□□ 8.5
SRSF1Q07955 QARS-242ENST00000635443 1053 ntTSL 511.33□□□□□ -0.62e-6■□□□□ 8.5
SRSF1Q07955 AL449266.1-201ENST00000357393 557 ntAPPRIS P1 TSL 4 BASIC11.05□□□□□ -0.642e-6■□□□□ 8.5
SRSF1Q07955 CEP250-210ENST00000465987 380 ntTSL 310.97□□□□□ -0.652e-6■□□□□ 8.5
SRSF1Q07955 QARS-206ENST00000452739 1044 ntTSL 510.86□□□□□ -0.672e-6■□□□□ 8.5
SRSF1Q07955 QARS-243ENST00000635494 568 ntTSL 410.86□□□□□ -0.672e-6■□□□□ 8.5
Retrieved 100 of 14,836 protein–RNA pairs in 553.5 ms