RNA–Protein interactions for RNA: ENST00000586904.1

NCLN-202, Transcript of nicalin, humanhuman

TSL 5

Gene NCLN, Length 836 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-202ENST00000586904 NISCHQ9Y2I1 1504 aa40.67■■■■■ 4.1
NCLN-202ENST00000586904 CCDC180Q9P1Z9 1646 aa36.06■■■■□ 3.36
NCLN-202ENST00000586904 ABCC9O60706 1549 aa34.99■■■■□ 3.19
NCLN-202ENST00000586904 ZCCHC6Q5VYS8 1495 aaKnown RBP33.94■■■■□ 3.02
NCLN-202ENST00000586904 NACADO15069 1562 aa33.83■■■■□ 3.01
NCLN-202ENST00000586904 DCAF8L2P0C7V8 631 aa33.79■■■■□ 3
NCLN-202ENST00000586904 RB1CC1Q8TDY2 1594 aa33.79■■■■□ 3
NCLN-202ENST00000586904 MYO15BQ96JP2 1530 aa33.73■■■□□ 2.99
NCLN-202ENST00000586904 DCAF1Q9Y4B6 1507 aa33.68■■■□□ 2.98
NCLN-202ENST00000586904 UNC13AQ9UPW8 1703 aa33.09■■■□□ 2.89
NCLN-202ENST00000586904 SCRIBQ14160 1630 aa32.88■■■□□ 2.85
NCLN-202ENST00000586904 BICRAQ9NZM4 1560 aa32.8■■■□□ 2.84
NCLN-202ENST00000586904 PABPN1Q86U42 306 aaKnown RBP eCLIP32.73■■■□□ 2.838e-6■□□□□ 8.9
NCLN-202ENST00000586904 SHROOM4Q9ULL8 1493 aa32.45■■■□□ 2.79
NCLN-202ENST00000586904 DNAJC5BQ9UF47 199 aa31.92■■■□□ 2.7
NCLN-202ENST00000586904 EIF4G1Q04637 1599 aaKnown RBP31.88■■■□□ 2.69
NCLN-202ENST00000586904 CC2D2AQ9P2K1 1620 aa31.7■■■□□ 2.66
NCLN-202ENST00000586904 CECR2Q9BXF3 1484 aa31.65■■■□□ 2.66
NCLN-202ENST00000586904 SMARCA4P51532 1647 aa31.51■■■□□ 2.63
NCLN-202ENST00000586904 BAZ1AQ9NRL2 1556 aaPredicted RBP31.49■■■□□ 2.63
NCLN-202ENST00000586904 MROH2BQ7Z745 1585 aa31.34■■■□□ 2.61
NCLN-202ENST00000586904 ATAD2BQ9ULI0 1458 aa31.27■■■□□ 2.6
NCLN-202ENST00000586904 SMARCA2P51531 1590 aa31.23■■■□□ 2.59
NCLN-202ENST00000586904 PEG3Q9GZU2 1588 aa31.22■■■□□ 2.59
NCLN-202ENST00000586904 NCAPD3P42695 1498 aa31.21■■■□□ 2.59
NCLN-202ENST00000586904 HMGXB3Q12766 1538 aa31.08■■■□□ 2.57
NCLN-202ENST00000586904 RSF1Q96T23 1441 aaPredicted RBP31.07■■■□□ 2.57
NCLN-202ENST00000586904 WIZO95785 1651 aa31.03■■■□□ 2.56
NCLN-202ENST00000586904 BAZ1BQ9UIG0 1483 aaKnown RBP31■■■□□ 2.55
NCLN-202ENST00000586904 TOP2AP11388 1531 aaKnown RBP30.7■■■□□ 2.51
NCLN-202ENST00000586904 SUPT5HO00267 1087 aaKnown RBP30.42■■■□□ 2.46
NCLN-202ENST00000586904 NESP48681 1621 aa30.37■■■□□ 2.45
NCLN-202ENST00000586904 LAMC3Q9Y6N6 1575 aa30.35■■■□□ 2.45
NCLN-202ENST00000586904 CCDC88BA6NC98 1476 aa30.34■■■□□ 2.45
NCLN-202ENST00000586904 CADPSQ9ULU8 1353 aa30.3■■■□□ 2.44
NCLN-202ENST00000586904 CFTRP13569 1480 aa30.19■■■□□ 2.42
NCLN-202ENST00000586904 ERCC6Q03468 1493 aa30.12■■■□□ 2.41
NCLN-202ENST00000586904 PDS5BQ9NTI5 1447 aa30.11■■■□□ 2.41
NCLN-202ENST00000586904 KIF21AQ7Z4S6 1674 aa30.05■■■□□ 2.4
NCLN-202ENST00000586904 PRDM2Q13029 1718 aa30.02■■■□□ 2.4
NCLN-202ENST00000586904 FANCD2Q9BXW9 1451 aa29.94■■■□□ 2.38
NCLN-202ENST00000586904 CEP164Q9UPV0 1460 aa29.88■■■□□ 2.37
NCLN-202ENST00000586904 THOC2Q8NI27 1593 aaKnown RBP29.88■■■□□ 2.37
NCLN-202ENST00000586904 MRC2Q9UBG0 1479 aa29.8■■■□□ 2.36
NCLN-202ENST00000586904 CUX2O14529 1486 aa29.74■■■□□ 2.35
NCLN-202ENST00000586904 WDR62O43379 1518 aa29.71■■■□□ 2.35
NCLN-202ENST00000586904 URB2Q14146 1524 aaKnown RBP29.66■■■□□ 2.34
NCLN-202ENST00000586904 ABCC8Q09428 1581 aa29.52■■■□□ 2.32
NCLN-202ENST00000586904 TOPBP1Q92547 1522 aa29.51■■■□□ 2.32
NCLN-202ENST00000586904 DNMBPQ6XZF7 1577 aa29.5■■■□□ 2.31
NCLN-202ENST00000586904 CUX1P39880 1505 aa29.39■■■□□ 2.3
NCLN-202ENST00000586904 POLA1P09884 1462 aaPredicted RBP29.28■■■□□ 2.28
NCLN-202ENST00000586904 WRNQ14191 1432 aaPredicted RBP eCLIP29.28■■■□□ 2.28
NCLN-202ENST00000586904 IFT140Q96RY7 1462 aa29.25■■■□□ 2.27
NCLN-202ENST00000586904 FGD5Q6ZNL6 1462 aa29.23■■■□□ 2.27
NCLN-202ENST00000586904 BIVM-ERCC5R4GMW8 1640 aa29.22■■■□□ 2.27
NCLN-202ENST00000586904 SYNJ1O43426 1573 aa29.21■■■□□ 2.27
NCLN-202ENST00000586904 TOP2BQ02880 1626 aa29.2■■■□□ 2.27
NCLN-202ENST00000586904 TARBP1Q13395 1621 aaKnown RBP29.19■■■□□ 2.26
NCLN-202ENST00000586904 RAD54L2Q9Y4B4 1467 aa29.15■■■□□ 2.26
NCLN-202ENST00000586904 SOGA1O94964 1423 aa29.14■■■□□ 2.26
NCLN-202ENST00000586904 ZNF608Q9ULD9 1512 aaPredicted RBP29.1■■■□□ 2.25
NCLN-202ENST00000586904 WDR97A6NE52 1622 aa29.03■■■□□ 2.24
NCLN-202ENST00000586904 EIF4G3O43432 1585 aaKnown RBP29.01■■■□□ 2.23
NCLN-202ENST00000586904 ABCA10Q8WWZ4 1543 aa28.98■■■□□ 2.23
NCLN-202ENST00000586904 AQRO60306 1485 aaKnown RBP eCLIP28.97■■■□□ 2.234e-7■■■■□ 26.7
NCLN-202ENST00000586904 TDRD9Q8NDG6 1382 aaKnown RBP28.94■■■□□ 2.22
NCLN-202ENST00000586904 ABCA5Q8WWZ7 1642 aa28.85■■■□□ 2.21
NCLN-202ENST00000586904 GAPVD1Q14C86 1478 aa28.82■■■□□ 2.2
NCLN-202ENST00000586904 GRIN2BQ13224 1484 aa28.78■■■□□ 2.2
NCLN-202ENST00000586904 PBRM1Q86U86 1689 aa28.77■■■□□ 2.2
NCLN-202ENST00000586904 TRIM41Q8WV44 630 aa28.72■■■□□ 2.19
NCLN-202ENST00000586904 SNAPC4Q5SXM2 1469 aa28.71■■■□□ 2.19
NCLN-202ENST00000586904 MAGI1Q96QZ7 1491 aaPredicted RBP28.68■■■□□ 2.18
NCLN-202ENST00000586904 KIF27Q86VH2 1401 aa28.64■■■□□ 2.18
NCLN-202ENST00000586904 ERICH3Q5RHP9 1530 aa28.63■■■□□ 2.17
NCLN-202ENST00000586904 CHD1O14646 1710 aa28.61■■■□□ 2.17
NCLN-202ENST00000586904 CHIC1Q5VXU3 224 aa28.58■■■□□ 2.17
NCLN-202ENST00000586904 SYNJ2O15056 1496 aa28.56■■■□□ 2.16
NCLN-202ENST00000586904 ADAMTS12P58397 1594 aa28.55■■■□□ 2.16
NCLN-202ENST00000586904 OSCARQ8IYS5 282 aa28.54■■■□□ 2.16
NCLN-202ENST00000586904 DNAJC5Q9H3Z4 198 aa28.53■■■□□ 2.16
NCLN-202ENST00000586904 FBLN2P98095 1184 aa28.52■■■□□ 2.16
NCLN-202ENST00000586904 IGF1RP08069 1367 aa28.5■■■□□ 2.15
NCLN-202ENST00000586904 CHMP7Q8WUX9 453 aaPredicted RBP28.5■■■□□ 2.15
NCLN-202ENST00000586904 FHAD1B1AJZ9 1412 aa28.5■■■□□ 2.15
NCLN-202ENST00000586904 RUSC2Q8N2Y8 1516 aa28.48■■■□□ 2.15
NCLN-202ENST00000586904 CUL7Q14999 1698 aa28.42■■■□□ 2.14
NCLN-202ENST00000586904 GRIN2AQ12879 1464 aa28.41■■■□□ 2.14
NCLN-202ENST00000586904 CARMIL1Q5VZK9 1371 aa28.34■■■□□ 2.13
NCLN-202ENST00000586904 CLASP1Q7Z460 1538 aa28.3■■■□□ 2.12
NCLN-202ENST00000586904 NUP160Q12769 1436 aa28.29■■■□□ 2.12
NCLN-202ENST00000586904 CEP170Q5SW79 1584 aa28.28■■■□□ 2.12
NCLN-202ENST00000586904 EEA1Q15075 1411 aa28.26■■■□□ 2.12
NCLN-202ENST00000586904 RAPGEF2Q9Y4G8 1499 aa28.2■■■□□ 2.1
NCLN-202ENST00000586904 CSRNP3Q8WYN3 585 aa28.18■■■□□ 2.1
NCLN-202ENST00000586904 PRXQ9BXM0 1461 aa28.18■■■□□ 2.1
NCLN-202ENST00000586904 FAM9AQ8IZU1 332 aaPredicted RBP28.11■■■□□ 2.09
NCLN-202ENST00000586904 ARHGEF11O15085 1522 aa28.1■■■□□ 2.09
NCLN-202ENST00000586904 RIMBP3CA6NJZ7 1639 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms