RNA–Protein interactions for RNA: ENST00000600044.5

ZNF544-216, Transcript of zinc finger protein 544, humanhuman

APPRIS ALT2 TSL 4 BASIC

Gene ZNF544, Length 2,784 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-216ENST00000600044 NISCHQ9Y2I1 1504 aa16.24■□□□□ 0.19
ZNF544-216ENST00000600044 CCDC180Q9P1Z9 1646 aa14.46□□□□□ -0.09
ZNF544-216ENST00000600044 SHROOM4Q9ULL8 1493 aa13.69□□□□□ -0.22
ZNF544-216ENST00000600044 ABCC9O60706 1549 aa13.62□□□□□ -0.23
ZNF544-216ENST00000600044 ZCCHC6Q5VYS8 1495 aaKnown RBP13.61□□□□□ -0.23
ZNF544-216ENST00000600044 DCAF1Q9Y4B6 1507 aa13.59□□□□□ -0.23
ZNF544-216ENST00000600044 MYO15BQ96JP2 1530 aa13.58□□□□□ -0.24
ZNF544-216ENST00000600044 HRCP23327 699 aa13.49□□□□□ -0.25
ZNF544-216ENST00000600044 NACADO15069 1562 aa13.48□□□□□ -0.25
ZNF544-216ENST00000600044 SUPT5HO00267 1087 aaKnown RBP13.45□□□□□ -0.26
ZNF544-216ENST00000600044 DCAF8L2P0C7V8 631 aa13.41□□□□□ -0.26
ZNF544-216ENST00000600044 RB1CC1Q8TDY2 1594 aa13.4□□□□□ -0.26
ZNF544-216ENST00000600044 PPARGC1BQ86YN6 1023 aaKnown RBP13.3□□□□□ -0.28
ZNF544-216ENST00000600044 PCGF6Q9BYE7 350 aa13.27□□□□□ -0.28
ZNF544-216ENST00000600044 CHIC1Q5VXU3 224 aa13.23□□□□□ -0.29
ZNF544-216ENST00000600044 UNC13AQ9UPW8 1703 aa13.07□□□□□ -0.32
ZNF544-216ENST00000600044 SCRIBQ14160 1630 aa13□□□□□ -0.33
ZNF544-216ENST00000600044 LOC105371045A0A1W2PR82 267 aa12.96□□□□□ -0.33
ZNF544-216ENST00000600044 BICRAQ9NZM4 1560 aa12.95□□□□□ -0.34
ZNF544-216ENST00000600044 TRIM26Q12899 539 aaPredicted RBP12.83□□□□□ -0.36
ZNF544-216ENST00000600044 PELP1Q8IZL8 1130 aaKnown RBP12.78□□□□□ -0.36
ZNF544-216ENST00000600044 SCAF1Q9H7N4 1312 aaKnown RBP12.76□□□□□ -0.37
ZNF544-216ENST00000600044 PABPN1Q86U42 306 aaKnown RBP eCLIP12.68□□□□□ -0.38
ZNF544-216ENST00000600044 ZEB1P37275 1124 aaPredicted RBP12.64□□□□□ -0.39
ZNF544-216ENST00000600044 RSF1Q96T23 1441 aaPredicted RBP12.62□□□□□ -0.39
ZNF544-216ENST00000600044 BAZ1AQ9NRL2 1556 aaPredicted RBP12.59□□□□□ -0.39
ZNF544-216ENST00000600044 EIF4G1Q04637 1599 aaKnown RBP12.57□□□□□ -0.4
ZNF544-216ENST00000600044 SMARCA4P51532 1647 aa12.56□□□□□ -0.4
ZNF544-216ENST00000600044 PEG3Q9GZU2 1588 aa12.52□□□□□ -0.41
ZNF544-216ENST00000600044 CECR2Q9BXF3 1484 aa12.51□□□□□ -0.41
ZNF544-216ENST00000600044 SMARCA2P51531 1590 aa12.46□□□□□ -0.42
ZNF544-216ENST00000600044 MROH2BQ7Z745 1585 aa12.45□□□□□ -0.42
ZNF544-216ENST00000600044 FAM9AQ8IZU1 332 aaPredicted RBP12.45□□□□□ -0.42
ZNF544-216ENST00000600044 NEUROD1Q13562 356 aa12.44□□□□□ -0.42
ZNF544-216ENST00000600044 CC2D2AQ9P2K1 1620 aa12.43□□□□□ -0.42
ZNF544-216ENST00000600044 ACIN1Q9UKV3 1341 aaKnown RBP12.43□□□□□ -0.42
ZNF544-216ENST00000600044 EHMT2Q96KQ7 1210 aa12.42□□□□□ -0.42
ZNF544-216ENST00000600044 TRIM41Q8WV44 630 aa12.41□□□□□ -0.42
ZNF544-216ENST00000600044 HMGXB3Q12766 1538 aa12.4□□□□□ -0.42
ZNF544-216ENST00000600044 NCAPD3P42695 1498 aa12.4□□□□□ -0.43
ZNF544-216ENST00000600044 ATAD2BQ9ULI0 1458 aa12.39□□□□□ -0.43
ZNF544-216ENST00000600044 GTF3C3Q9Y5Q9 886 aa12.34□□□□□ -0.43
ZNF544-216ENST00000600044 WIZO95785 1651 aa12.34□□□□□ -0.43
ZNF544-216ENST00000600044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.34□□□□□ -0.43
ZNF544-216ENST00000600044 TOP2AP11388 1531 aaKnown RBP12.3□□□□□ -0.44
ZNF544-216ENST00000600044 BAZ1BQ9UIG0 1483 aaKnown RBP12.29□□□□□ -0.44
ZNF544-216ENST00000600044 DIEXFQ68CQ4 756 aaKnown RBP12.25□□□□□ -0.45
ZNF544-216ENST00000600044 CCER1Q8TC90 406 aaPredicted RBP12.25□□□□□ -0.45
ZNF544-216ENST00000600044 MYT1Q01538 1121 aa12.21□□□□□ -0.45
ZNF544-216ENST00000600044 DNAJC5BQ9UF47 199 aa12.2□□□□□ -0.46
ZNF544-216ENST00000600044 CENPBP07199 599 aaPredicted RBP12.2□□□□□ -0.46
ZNF544-216ENST00000600044 CCDC88BA6NC98 1476 aa12.11□□□□□ -0.47
ZNF544-216ENST00000600044 TTBK1Q5TCY1 1321 aaPredicted RBP12.09□□□□□ -0.47
ZNF544-216ENST00000600044 ABCC8Q09428 1581 aa12.07□□□□□ -0.48
ZNF544-216ENST00000600044 YTHDC1Q96MU7 727 aaKnown RBP12.06□□□□□ -0.48
ZNF544-216ENST00000600044 LAMC3Q9Y6N6 1575 aa12.05□□□□□ -0.48
ZNF544-216ENST00000600044 PRDM2Q13029 1718 aa12.05□□□□□ -0.48
ZNF544-216ENST00000600044 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
ZNF544-216ENST00000600044 CFTRP13569 1480 aa12.01□□□□□ -0.49
ZNF544-216ENST00000600044 MIER1Q8N108 512 aa12□□□□□ -0.49
ZNF544-216ENST00000600044 CADPSQ9ULU8 1353 aa11.99□□□□□ -0.49
ZNF544-216ENST00000600044 SOGA1O94964 1423 aa11.96□□□□□ -0.49
ZNF544-216ENST00000600044 RUSC2Q8N2Y8 1516 aa11.93□□□□□ -0.5
ZNF544-216ENST00000600044 WRNQ14191 1432 aaPredicted RBP eCLIP11.93□□□□□ -0.59e-6■■■■■ 50.1
ZNF544-216ENST00000600044 PDS5BQ9NTI5 1447 aa11.91□□□□□ -0.5
ZNF544-216ENST00000600044 CEP162Q5TB80 1403 aa11.88□□□□□ -0.51
ZNF544-216ENST00000600044 NESP48681 1621 aa11.86□□□□□ -0.51
ZNF544-216ENST00000600044 CSRNP3Q8WYN3 585 aa11.86□□□□□ -0.51
ZNF544-216ENST00000600044 UBTFP17480 764 aaKnown RBP11.84□□□□□ -0.51
ZNF544-216ENST00000600044 FANCD2Q9BXW9 1451 aa11.84□□□□□ -0.51
ZNF544-216ENST00000600044 KIF21AQ7Z4S6 1674 aa11.83□□□□□ -0.52
ZNF544-216ENST00000600044 CEP164Q9UPV0 1460 aa11.82□□□□□ -0.52
ZNF544-216ENST00000600044 HNRNPUL2Q1KMD3 747 aaKnown RBP11.82□□□□□ -0.52
ZNF544-216ENST00000600044 TNIKQ9UKE5 1360 aa11.81□□□□□ -0.52
ZNF544-216ENST00000600044 SYNJ1O43426 1573 aa11.78□□□□□ -0.52
ZNF544-216ENST00000600044 THOC2Q8NI27 1593 aaKnown RBP11.78□□□□□ -0.52
ZNF544-216ENST00000600044 MRC2Q9UBG0 1479 aa11.77□□□□□ -0.52
ZNF544-216ENST00000600044 WDR62O43379 1518 aa11.76□□□□□ -0.53
ZNF544-216ENST00000600044 SUPT16HQ9Y5B9 1047 aaKnown RBP11.76□□□□□ -0.53
ZNF544-216ENST00000600044 DNMBPQ6XZF7 1577 aa11.76□□□□□ -0.53
ZNF544-216ENST00000600044 ERCC6Q03468 1493 aa11.76□□□□□ -0.53
ZNF544-216ENST00000600044 BIVM-ERCC5R4GMW8 1640 aa11.75□□□□□ -0.53
ZNF544-216ENST00000600044 EEA1Q15075 1411 aa11.74□□□□□ -0.53
ZNF544-216ENST00000600044 RANGAP1P46060 587 aaPredicted RBP11.73□□□□□ -0.53
ZNF544-216ENST00000600044 TOP2BQ02880 1626 aa11.72□□□□□ -0.53
ZNF544-216ENST00000600044 GOLGA3Q08378 1498 aa11.71□□□□□ -0.54
ZNF544-216ENST00000600044 TSHZ2Q9NRE2 1034 aa11.71□□□□□ -0.54
ZNF544-216ENST00000600044 URB2Q14146 1524 aaKnown RBP11.7□□□□□ -0.54
ZNF544-216ENST00000600044 TOPBP1Q92547 1522 aa11.7□□□□□ -0.54
ZNF544-216ENST00000600044 CUX1P39880 1505 aa11.69□□□□□ -0.54
ZNF544-216ENST00000600044 CUX2O14529 1486 aa11.69□□□□□ -0.54
ZNF544-216ENST00000600044 WDR97A6NE52 1622 aa11.66□□□□□ -0.54
ZNF544-216ENST00000600044 ANP32EQ9BTT0 268 aa11.65□□□□□ -0.54
ZNF544-216ENST00000600044 RAPGEF2Q9Y4G8 1499 aa11.64□□□□□ -0.55
ZNF544-216ENST00000600044 CLIP1P30622 1438 aa11.61□□□□□ -0.55
ZNF544-216ENST00000600044 CLSPNQ9HAW4 1339 aa11.6□□□□□ -0.55
ZNF544-216ENST00000600044 IFT140Q96RY7 1462 aa11.6□□□□□ -0.55
ZNF544-216ENST00000600044 KIF21BO75037 1637 aa11.59□□□□□ -0.55
ZNF544-216ENST00000600044 POLA1P09884 1462 aaPredicted RBP11.59□□□□□ -0.55
ZNF544-216ENST00000600044 FGD5Q6ZNL6 1462 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms