RNA–Protein interactions for RNA: ENST00000357428.5

USP33-201, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 5 BASIC

Gene USP33, Length 4,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-201ENST00000357428 NISCHQ9Y2I1 1504 aa7.13□□□□□ -1.27
USP33-201ENST00000357428 DCAF8L2P0C7V8 631 aa6.55□□□□□ -1.36
USP33-201ENST00000357428 SHROOM4Q9ULL8 1493 aa6.42□□□□□ -1.38
USP33-201ENST00000357428 SUPT5HO00267 1087 aaKnown RBP6.35□□□□□ -1.39
USP33-201ENST00000357428 EHMT2Q96KQ7 1210 aa5.99□□□□□ -1.45
USP33-201ENST00000357428 CCDC180Q9P1Z9 1646 aa5.99□□□□□ -1.45
USP33-201ENST00000357428 ZCCHC6Q5VYS8 1495 aaKnown RBP5.97□□□□□ -1.45
USP33-201ENST00000357428 ABCC9O60706 1549 aa5.94□□□□□ -1.46
USP33-201ENST00000357428 FAM9AQ8IZU1 332 aaPredicted RBP5.93□□□□□ -1.46
USP33-201ENST00000357428 CHIC1Q5VXU3 224 aa5.88□□□□□ -1.47
USP33-201ENST00000357428 TRIM41Q8WV44 630 aa5.88□□□□□ -1.47
USP33-201ENST00000357428 PCGF6Q9BYE7 350 aa5.85□□□□□ -1.47
USP33-201ENST00000357428 SCRIBQ14160 1630 aa5.82□□□□□ -1.48
USP33-201ENST00000357428 LOC105371045A0A1W2PR82 267 aa5.79□□□□□ -1.48
USP33-201ENST00000357428 TTBK1Q5TCY1 1321 aaPredicted RBP5.78□□□□□ -1.48
USP33-201ENST00000357428 PABPN1Q86U42 306 aaKnown RBP eCLIP5.76□□□□□ -1.49
USP33-201ENST00000357428 RANGAP1P46060 587 aaPredicted RBP5.73□□□□□ -1.49
USP33-201ENST00000357428 DCAF1Q9Y4B6 1507 aa5.71□□□□□ -1.49
USP33-201ENST00000357428 PPARGC1BQ86YN6 1023 aaKnown RBP5.71□□□□□ -1.5
USP33-201ENST00000357428 UBTFP17480 764 aaKnown RBP5.7□□□□□ -1.5
USP33-201ENST00000357428 APLP2Q06481 763 aa5.7□□□□□ -1.5
USP33-201ENST00000357428 MYO15BQ96JP2 1530 aa5.66□□□□□ -1.5
USP33-201ENST00000357428 TRIM26Q12899 539 aaPredicted RBP5.66□□□□□ -1.5
USP33-201ENST00000357428 NACADO15069 1562 aa5.66□□□□□ -1.5
USP33-201ENST00000357428 RB1CC1Q8TDY2 1594 aa5.65□□□□□ -1.5
USP33-201ENST00000357428 RSF1Q96T23 1441 aaPredicted RBP5.65□□□□□ -1.5
USP33-201ENST00000357428 HRCP23327 699 aa5.64□□□□□ -1.51
USP33-201ENST00000357428 CCER1Q8TC90 406 aaPredicted RBP5.62□□□□□ -1.51
USP33-201ENST00000357428 CECR2Q9BXF3 1484 aa5.6□□□□□ -1.51
USP33-201ENST00000357428 ZEB1P37275 1124 aaPredicted RBP5.6□□□□□ -1.51
USP33-201ENST00000357428 ATP1B4Q9UN42 357 aaPredicted RBP5.57□□□□□ -1.52
USP33-201ENST00000357428 MROH2BQ7Z745 1585 aa5.55□□□□□ -1.52
USP33-201ENST00000357428 BAZ1AQ9NRL2 1556 aaPredicted RBP5.54□□□□□ -1.52
USP33-201ENST00000357428 HNRNPUL2Q1KMD3 747 aaKnown RBP5.52□□□□□ -1.53
USP33-201ENST00000357428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.52□□□□□ -1.53
USP33-201ENST00000357428 CSRNP3Q8WYN3 585 aa5.52□□□□□ -1.53
USP33-201ENST00000357428 WIZO95785 1651 aa5.5□□□□□ -1.53
USP33-201ENST00000357428 ITGAEP38570 1179 aa5.49□□□□□ -1.53
USP33-201ENST00000357428 BAZ1BQ9UIG0 1483 aaKnown RBP5.47□□□□□ -1.53
USP33-201ENST00000357428 CCDC88BA6NC98 1476 aa5.45□□□□□ -1.54
USP33-201ENST00000357428 ABCC8Q09428 1581 aa5.44□□□□□ -1.54
USP33-201ENST00000357428 WRNQ14191 1432 aaPredicted RBP eCLIP5.44□□□□□ -1.54
USP33-201ENST00000357428 TOP2AP11388 1531 aaKnown RBP5.43□□□□□ -1.54
USP33-201ENST00000357428 SMARCA4P51532 1647 aa5.43□□□□□ -1.54
USP33-201ENST00000357428 YTHDC1Q96MU7 727 aaKnown RBP5.42□□□□□ -1.54
USP33-201ENST00000357428 CENPBP07199 599 aaPredicted RBP5.41□□□□□ -1.54
USP33-201ENST00000357428 CEP162Q5TB80 1403 aa5.41□□□□□ -1.54
USP33-201ENST00000357428 SOGA1O94964 1423 aa5.41□□□□□ -1.54
USP33-201ENST00000357428 EEA1Q15075 1411 aa5.4□□□□□ -1.55
USP33-201ENST00000357428 P3H3Q8IVL6 736 aa5.4□□□□□ -1.55
USP33-201ENST00000357428 GOLGA3Q08378 1498 aa5.4□□□□□ -1.55
USP33-201ENST00000357428 FAM50AQ14320 339 aaKnown RBP5.39□□□□□ -1.55
USP33-201ENST00000357428 CLIP1P30622 1438 aa5.39□□□□□ -1.55
USP33-201ENST00000357428 SMARCA2P51531 1590 aa5.38□□□□□ -1.55
USP33-201ENST00000357428 TNIKQ9UKE5 1360 aa5.37□□□□□ -1.55
USP33-201ENST00000357428 ATAD2BQ9ULI0 1458 aa5.36□□□□□ -1.55
USP33-201ENST00000357428 DIEXFQ68CQ4 756 aaKnown RBP5.36□□□□□ -1.55
USP33-201ENST00000357428 CEP164Q9UPV0 1460 aa5.36□□□□□ -1.55
USP33-201ENST00000357428 AEBP2Q6ZN18 517 aaPredicted RBP5.34□□□□□ -1.56
USP33-201ENST00000357428 ARID3CA6NKF2 412 aa5.33□□□□□ -1.56
USP33-201ENST00000357428 KIF27Q86VH2 1401 aa5.33□□□□□ -1.56
USP33-201ENST00000357428 RUSC2Q8N2Y8 1516 aa5.32□□□□□ -1.56
USP33-201ENST00000357428 FBLN2P98095 1184 aa5.32□□□□□ -1.56
USP33-201ENST00000357428 NEUROD1Q13562 356 aa5.31□□□□□ -1.56
USP33-201ENST00000357428 PELP1Q8IZL8 1130 aaKnown RBP5.3□□□□□ -1.56
USP33-201ENST00000357428 ZNF316A6NFI3 1004 aaPredicted RBP5.3□□□□□ -1.56
USP33-201ENST00000357428 CUX2O14529 1486 aa5.3□□□□□ -1.56
USP33-201ENST00000357428 UNC13AQ9UPW8 1703 aa5.29□□□□□ -1.56
USP33-201ENST00000357428 BICRAQ9NZM4 1560 aa5.28□□□□□ -1.56
USP33-201ENST00000357428 TRIM52Q96A61 297 aa5.28□□□□□ -1.56
USP33-201ENST00000357428 RAPGEF2Q9Y4G8 1499 aa5.27□□□□□ -1.57
USP33-201ENST00000357428 VPS8Q8N3P4 1428 aa5.27□□□□□ -1.57
USP33-201ENST00000357428 EIF4G1Q04637 1599 aaKnown RBP5.26□□□□□ -1.57
USP33-201ENST00000357428 POLR3GLQ9BT43 218 aa5.26□□□□□ -1.57
USP33-201ENST00000357428 CARMIL1Q5VZK9 1371 aa5.25□□□□□ -1.57
USP33-201ENST00000357428 CADPSQ9ULU8 1353 aa5.25□□□□□ -1.57
USP33-201ENST00000357428 SYNJ1O43426 1573 aa5.25□□□□□ -1.57
USP33-201ENST00000357428 MTUS2Q5JR59 1369 aa5.24□□□□□ -1.57
USP33-201ENST00000357428 CNGB1Q14028 1251 aaPredicted RBP5.24□□□□□ -1.57
USP33-201ENST00000357428 MYT1LQ9UL68 1186 aa5.23□□□□□ -1.57
USP33-201ENST00000357428 NCAPD3P42695 1498 aa5.23□□□□□ -1.57
USP33-201ENST00000357428 NEFLP07196 543 aa5.22□□□□□ -1.57
USP33-201ENST00000357428 KANK4Q5T7N3 995 aaPredicted RBP5.22□□□□□ -1.57
USP33-201ENST00000357428 ZNF777Q9ULD5 760 aaPredicted RBP5.22□□□□□ -1.57
USP33-201ENST00000357428 CHIC2Q9UKJ5 165 aa5.21□□□□□ -1.57
USP33-201ENST00000357428 GTF3C3Q9Y5Q9 886 aa5.21□□□□□ -1.58
USP33-201ENST00000357428 FANCD2Q9BXW9 1451 aa5.21□□□□□ -1.58
USP33-201ENST00000357428 TDRD9Q8NDG6 1382 aaKnown RBP5.2□□□□□ -1.58
USP33-201ENST00000357428 ZNF326Q5BKZ1 582 aaKnown RBP5.2□□□□□ -1.58
USP33-201ENST00000357428 ACIN1Q9UKV3 1341 aaKnown RBP5.2□□□□□ -1.58
USP33-201ENST00000357428 CHMP7Q8WUX9 453 aaPredicted RBP5.2□□□□□ -1.58
USP33-201ENST00000357428 CDK11AQ9UQ88 783 aaPredicted RBP5.2□□□□□ -1.58
USP33-201ENST00000357428 CCNB3Q8WWL7 1395 aa5.19□□□□□ -1.58
USP33-201ENST00000357428 FHAD1B1AJZ9 1412 aa5.19□□□□□ -1.58
USP33-201ENST00000357428 HMGXB3Q12766 1538 aa5.19□□□□□ -1.58
USP33-201ENST00000357428 FGD5Q6ZNL6 1462 aa5.19□□□□□ -1.58
USP33-201ENST00000357428 TONSLQ96HA7 1378 aa5.19□□□□□ -1.58
USP33-201ENST00000357428 ERCC6Q03468 1493 aa5.19□□□□□ -1.58
USP33-201ENST00000357428 PDS5BQ9NTI5 1447 aa5.19□□□□□ -1.58
USP33-201ENST00000357428 KIF21BO75037 1637 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms