RNA–Protein interactions for RNA: ENST00000428937.1

CDC45-204, Transcript of cell division cycle 45, humanhuman

TSL 5

Gene CDC45, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC45-204ENST00000428937 NISCHQ9Y2I1 1504 aa43.69■■■■■ 4.59
CDC45-204ENST00000428937 CCDC180Q9P1Z9 1646 aa38.43■■■■□ 3.74
CDC45-204ENST00000428937 ABCC9O60706 1549 aa37.26■■■■□ 3.56
CDC45-204ENST00000428937 DCAF8L2P0C7V8 631 aa36.5■■■■□ 3.43
CDC45-204ENST00000428937 ZCCHC6Q5VYS8 1495 aaKnown RBP36.48■■■■□ 3.43
CDC45-204ENST00000428937 DCAF1Q9Y4B6 1507 aa36.18■■■■□ 3.38
CDC45-204ENST00000428937 NACADO15069 1562 aa36.15■■■■□ 3.38
CDC45-204ENST00000428937 MYO15BQ96JP2 1530 aa36.13■■■■□ 3.38
CDC45-204ENST00000428937 RB1CC1Q8TDY2 1594 aa36.03■■■■□ 3.36
CDC45-204ENST00000428937 SCRIBQ14160 1630 aa35.17■■■■□ 3.22
CDC45-204ENST00000428937 PABPN1Q86U42 306 aaKnown RBP eCLIP35.03■■■■□ 3.2
CDC45-204ENST00000428937 UNC13AQ9UPW8 1703 aa34.94■■■■□ 3.18
CDC45-204ENST00000428937 SHROOM4Q9ULL8 1493 aa34.92■■■■□ 3.18
CDC45-204ENST00000428937 BICRAQ9NZM4 1560 aa34.86■■■■□ 3.17
CDC45-204ENST00000428937 CECR2Q9BXF3 1484 aa33.98■■■■□ 3.03
CDC45-204ENST00000428937 EIF4G1Q04637 1599 aaKnown RBP33.94■■■■□ 3.02
CDC45-204ENST00000428937 BAZ1AQ9NRL2 1556 aaPredicted RBP33.81■■■■□ 3
CDC45-204ENST00000428937 DNAJC5BQ9UF47 199 aa33.78■■■■□ 3
CDC45-204ENST00000428937 SMARCA4P51532 1647 aa33.69■■■□□ 2.98
CDC45-204ENST00000428937 MROH2BQ7Z745 1585 aa33.65■■■□□ 2.98
CDC45-204ENST00000428937 CC2D2AQ9P2K1 1620 aa33.64■■■□□ 2.98
CDC45-204ENST00000428937 RSF1Q96T23 1441 aaPredicted RBP33.55■■■□□ 2.96
CDC45-204ENST00000428937 ATAD2BQ9ULI0 1458 aa33.5■■■□□ 2.95
CDC45-204ENST00000428937 SMARCA2P51531 1590 aa33.45■■■□□ 2.95
CDC45-204ENST00000428937 NCAPD3P42695 1498 aa33.43■■■□□ 2.94
CDC45-204ENST00000428937 PEG3Q9GZU2 1588 aa33.38■■■□□ 2.93
CDC45-204ENST00000428937 BAZ1BQ9UIG0 1483 aaKnown RBP33.25■■■□□ 2.91
CDC45-204ENST00000428937 WIZO95785 1651 aa33.23■■■□□ 2.91
CDC45-204ENST00000428937 SUPT5HO00267 1087 aaKnown RBP33.23■■■□□ 2.91
CDC45-204ENST00000428937 HMGXB3Q12766 1538 aa33.21■■■□□ 2.91
CDC45-204ENST00000428937 TOP2AP11388 1531 aaKnown RBP32.99■■■□□ 2.87
CDC45-204ENST00000428937 CCDC88BA6NC98 1476 aa32.67■■■□□ 2.82
CDC45-204ENST00000428937 CADPSQ9ULU8 1353 aa32.53■■■□□ 2.8
CDC45-204ENST00000428937 CFTRP13569 1480 aa32.39■■■□□ 2.78
CDC45-204ENST00000428937 NESP48681 1621 aa32.37■■■□□ 2.77
CDC45-204ENST00000428937 LAMC3Q9Y6N6 1575 aa32.35■■■□□ 2.77
CDC45-204ENST00000428937 PDS5BQ9NTI5 1447 aa32.26■■■□□ 2.76
CDC45-204ENST00000428937 ERCC6Q03468 1493 aa32.12■■■□□ 2.73
CDC45-204ENST00000428937 FANCD2Q9BXW9 1451 aa32.08■■■□□ 2.73
CDC45-204ENST00000428937 CEP164Q9UPV0 1460 aa31.97■■■□□ 2.71
CDC45-204ENST00000428937 PRDM2Q13029 1718 aa31.86■■■□□ 2.69
CDC45-204ENST00000428937 KIF21AQ7Z4S6 1674 aa31.83■■■□□ 2.69
CDC45-204ENST00000428937 MRC2Q9UBG0 1479 aa31.82■■■□□ 2.68
CDC45-204ENST00000428937 ABCC8Q09428 1581 aa31.7■■■□□ 2.67
CDC45-204ENST00000428937 URB2Q14146 1524 aaKnown RBP31.67■■■□□ 2.66
CDC45-204ENST00000428937 THOC2Q8NI27 1593 aaKnown RBP31.65■■■□□ 2.66
CDC45-204ENST00000428937 WRNQ14191 1432 aaPredicted RBP eCLIP31.63■■■□□ 2.65
CDC45-204ENST00000428937 WDR62O43379 1518 aa31.63■■■□□ 2.65
CDC45-204ENST00000428937 TOPBP1Q92547 1522 aa31.59■■■□□ 2.65
CDC45-204ENST00000428937 DNMBPQ6XZF7 1577 aa31.56■■■□□ 2.64
CDC45-204ENST00000428937 CUX2O14529 1486 aa31.55■■■□□ 2.64
CDC45-204ENST00000428937 CUX1P39880 1505 aa31.54■■■□□ 2.64
CDC45-204ENST00000428937 TRIM41Q8WV44 630 aa31.4■■■□□ 2.62
CDC45-204ENST00000428937 TOP2BQ02880 1626 aa31.38■■■□□ 2.61
CDC45-204ENST00000428937 POLA1P09884 1462 aaPredicted RBP31.37■■■□□ 2.61
CDC45-204ENST00000428937 FGD5Q6ZNL6 1462 aa31.37■■■□□ 2.61
CDC45-204ENST00000428937 SYNJ1O43426 1573 aa31.37■■■□□ 2.61
CDC45-204ENST00000428937 SOGA1O94964 1423 aa31.35■■■□□ 2.61
CDC45-204ENST00000428937 CHIC1Q5VXU3 224 aa31.33■■■□□ 2.61
CDC45-204ENST00000428937 IFT140Q96RY7 1462 aa31.32■■■□□ 2.6
CDC45-204ENST00000428937 BIVM-ERCC5R4GMW8 1640 aa31.3■■■□□ 2.6
CDC45-204ENST00000428937 RAD54L2Q9Y4B4 1467 aa31.26■■■□□ 2.59
CDC45-204ENST00000428937 ABCA10Q8WWZ4 1543 aa31.12■■■□□ 2.57
CDC45-204ENST00000428937 TARBP1Q13395 1621 aaKnown RBP31.12■■■□□ 2.57
CDC45-204ENST00000428937 TDRD9Q8NDG6 1382 aaKnown RBP31.1■■■□□ 2.57
CDC45-204ENST00000428937 ZNF608Q9ULD9 1512 aaPredicted RBP31.07■■■□□ 2.56
CDC45-204ENST00000428937 AQRO60306 1485 aaKnown RBP eCLIP31.02■■■□□ 2.569e-24■■■■■ 49.4
CDC45-204ENST00000428937 KIF27Q86VH2 1401 aa30.97■■■□□ 2.55
CDC45-204ENST00000428937 GAPVD1Q14C86 1478 aa30.95■■■□□ 2.54
CDC45-204ENST00000428937 WDR97A6NE52 1622 aa30.94■■■□□ 2.54
CDC45-204ENST00000428937 GRIN2BQ13224 1484 aa30.87■■■□□ 2.53
CDC45-204ENST00000428937 EIF4G3O43432 1585 aaKnown RBP30.86■■■□□ 2.53
CDC45-204ENST00000428937 ABCA5Q8WWZ7 1642 aa30.81■■■□□ 2.52
CDC45-204ENST00000428937 IGF1RP08069 1367 aa30.79■■■□□ 2.52
CDC45-204ENST00000428937 RUSC2Q8N2Y8 1516 aa30.76■■■□□ 2.51
CDC45-204ENST00000428937 EEA1Q15075 1411 aa30.73■■■□□ 2.51
CDC45-204ENST00000428937 ERICH3Q5RHP9 1530 aa30.73■■■□□ 2.51
CDC45-204ENST00000428937 SNAPC4Q5SXM2 1469 aa30.7■■■□□ 2.51
CDC45-204ENST00000428937 MAGI1Q96QZ7 1491 aaPredicted RBP30.7■■■□□ 2.51
CDC45-204ENST00000428937 CSRNP3Q8WYN3 585 aa30.7■■■□□ 2.51
CDC45-204ENST00000428937 FAM9AQ8IZU1 332 aaPredicted RBP30.69■■■□□ 2.5
CDC45-204ENST00000428937 CHMP7Q8WUX9 453 aaPredicted RBP30.67■■■□□ 2.5
CDC45-204ENST00000428937 FBLN2P98095 1184 aa30.66■■■□□ 2.5
CDC45-204ENST00000428937 FHAD1B1AJZ9 1412 aa30.64■■■□□ 2.49
CDC45-204ENST00000428937 CARMIL1Q5VZK9 1371 aa30.62■■■□□ 2.49
CDC45-204ENST00000428937 PBRM1Q86U86 1689 aa30.6■■■□□ 2.49
CDC45-204ENST00000428937 SYNJ2O15056 1496 aa30.59■■■□□ 2.49
CDC45-204ENST00000428937 ADAMTS12P58397 1594 aa30.5■■■□□ 2.47
CDC45-204ENST00000428937 OSCARQ8IYS5 282 aa30.5■■■□□ 2.47
CDC45-204ENST00000428937 CUL7Q14999 1698 aa30.47■■■□□ 2.47
CDC45-204ENST00000428937 PRXQ9BXM0 1461 aa30.46■■■□□ 2.47
CDC45-204ENST00000428937 RAPGEF2Q9Y4G8 1499 aa30.44■■■□□ 2.46
CDC45-204ENST00000428937 GRIN2AQ12879 1464 aa30.44■■■□□ 2.46
CDC45-204ENST00000428937 NUP160Q12769 1436 aa30.3■■■□□ 2.44
CDC45-204ENST00000428937 CHD1O14646 1710 aa30.28■■■□□ 2.44
CDC45-204ENST00000428937 EHMT2Q96KQ7 1210 aa30.23■■■□□ 2.43
CDC45-204ENST00000428937 KIF21BO75037 1637 aa30.22■■■□□ 2.43
CDC45-204ENST00000428937 UBTFP17480 764 aaKnown RBP30.21■■■□□ 2.43
CDC45-204ENST00000428937 GOLGA3Q08378 1498 aa30.19■■■□□ 2.42
CDC45-204ENST00000428937 CEP170Q5SW79 1584 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms