RNA–Protein interactions for RNA: ENST00000468250.1

EIF3B-209, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

TSL 2

Gene EIF3B, Length 602 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-209ENST00000468250 NISCHQ9Y2I1 1504 aa18.5■□□□□ 0.55
EIF3B-209ENST00000468250 ABCC9O60706 1549 aa16.96■□□□□ 0.3
EIF3B-209ENST00000468250 CCDC180Q9P1Z9 1646 aa16.72■□□□□ 0.27
EIF3B-209ENST00000468250 DNAJC5BQ9UF47 199 aa16.1■□□□□ 0.17
EIF3B-209ENST00000468250 RB1CC1Q8TDY2 1594 aa16.07■□□□□ 0.16
EIF3B-209ENST00000468250 NACADO15069 1562 aa15.89■□□□□ 0.13
EIF3B-209ENST00000468250 DCAF8L2P0C7V8 631 aa15.8■□□□□ 0.12
EIF3B-209ENST00000468250 PABPN1Q86U42 306 aaKnown RBP eCLIP15.76■□□□□ 0.11
EIF3B-209ENST00000468250 UNC13AQ9UPW8 1703 aa15.63■□□□□ 0.09
EIF3B-209ENST00000468250 MYO15BQ96JP2 1530 aa15.59■□□□□ 0.09
EIF3B-209ENST00000468250 BICRAQ9NZM4 1560 aa15.53■□□□□ 0.08
EIF3B-209ENST00000468250 SHROOM4Q9ULL8 1493 aa15.39■□□□□ 0.05
EIF3B-209ENST00000468250 CECR2Q9BXF3 1484 aa15.32■□□□□ 0.04
EIF3B-209ENST00000468250 CC2D2AQ9P2K1 1620 aa15.31■□□□□ 0.04
EIF3B-209ENST00000468250 DCAF1Q9Y4B6 1507 aa15.29■□□□□ 0.04
EIF3B-209ENST00000468250 ZCCHC6Q5VYS8 1495 aaKnown RBP15.27■□□□□ 0.03
EIF3B-209ENST00000468250 EIF4G1Q04637 1599 aaKnown RBP15.22■□□□□ 0.03
EIF3B-209ENST00000468250 SCRIBQ14160 1630 aa15.2■□□□□ 0.02
EIF3B-209ENST00000468250 DNAJC5Q9H3Z4 198 aa15.05■□□□□ -0
EIF3B-209ENST00000468250 CUX2O14529 1486 aa14.76□□□□□ -0.05
EIF3B-209ENST00000468250 ERCC6Q03468 1493 aa14.71□□□□□ -0.05
EIF3B-209ENST00000468250 NCAPD3P42695 1498 aa14.66□□□□□ -0.06
EIF3B-209ENST00000468250 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
EIF3B-209ENST00000468250 SMARCA2P51531 1590 aa14.55□□□□□ -0.08
EIF3B-209ENST00000468250 HMGXB3Q12766 1538 aa14.53□□□□□ -0.08
EIF3B-209ENST00000468250 SMARCA4P51532 1647 aa14.48□□□□□ -0.09
EIF3B-209ENST00000468250 NESP48681 1621 aa14.47□□□□□ -0.09
EIF3B-209ENST00000468250 BAZ1BQ9UIG0 1483 aaKnown RBP14.44□□□□□ -0.1
EIF3B-209ENST00000468250 BAZ1AQ9NRL2 1556 aaPredicted RBP14.4□□□□□ -0.1
EIF3B-209ENST00000468250 LAMC3Q9Y6N6 1575 aa14.39□□□□□ -0.11
EIF3B-209ENST00000468250 THOC2Q8NI27 1593 aaKnown RBP14.38□□□□□ -0.11
EIF3B-209ENST00000468250 PDS5BQ9NTI5 1447 aa14.35□□□□□ -0.11
EIF3B-209ENST00000468250 PEG3Q9GZU2 1588 aa14.34□□□□□ -0.11
EIF3B-209ENST00000468250 TRIM41Q8WV44 630 aa14.29□□□□□ -0.12
EIF3B-209ENST00000468250 KIF21AQ7Z4S6 1674 aa14.28□□□□□ -0.12
EIF3B-209ENST00000468250 CADPSQ9ULU8 1353 aa14.22□□□□□ -0.13
EIF3B-209ENST00000468250 MROH2BQ7Z745 1585 aa14.22□□□□□ -0.13
EIF3B-209ENST00000468250 MRC2Q9UBG0 1479 aa14.19□□□□□ -0.14
EIF3B-209ENST00000468250 WDR62O43379 1518 aa14.15□□□□□ -0.14
EIF3B-209ENST00000468250 CEP164Q9UPV0 1460 aa14.1□□□□□ -0.15
EIF3B-209ENST00000468250 OSCARQ8IYS5 282 aa14.09□□□□□ -0.15
EIF3B-209ENST00000468250 FANCD2Q9BXW9 1451 aa14.05□□□□□ -0.16
EIF3B-209ENST00000468250 WIZO95785 1651 aa14.04□□□□□ -0.16
EIF3B-209ENST00000468250 CFTRP13569 1480 aa13.99□□□□□ -0.17
EIF3B-209ENST00000468250 URB2Q14146 1524 aaKnown RBP13.9□□□□□ -0.18
EIF3B-209ENST00000468250 TOP2AP11388 1531 aaKnown RBP13.87□□□□□ -0.19
EIF3B-209ENST00000468250 RSF1Q96T23 1441 aaPredicted RBP13.86□□□□□ -0.19
EIF3B-209ENST00000468250 RIMBP3CA6NJZ7 1639 aa13.85□□□□□ -0.19
EIF3B-209ENST00000468250 RIMBP3BA6NNM3 1639 aa13.85□□□□□ -0.19
EIF3B-209ENST00000468250 RIMBP3Q9UFD9 1639 aa13.85□□□□□ -0.19
EIF3B-209ENST00000468250 IFT140Q96RY7 1462 aa13.83□□□□□ -0.2
EIF3B-209ENST00000468250 PRDM2Q13029 1718 aa13.81□□□□□ -0.2
EIF3B-209ENST00000468250 ARHGEF11O15085 1522 aa13.79□□□□□ -0.2
EIF3B-209ENST00000468250 ZNF608Q9ULD9 1512 aaPredicted RBP13.78□□□□□ -0.2
EIF3B-209ENST00000468250 ABCC8Q09428 1581 aa13.76□□□□□ -0.21
EIF3B-209ENST00000468250 CYB5RLQ6IPT4 315 aa13.75□□□□□ -0.21
EIF3B-209ENST00000468250 TOPBP1Q92547 1522 aa13.74□□□□□ -0.21
EIF3B-209ENST00000468250 TRHP20396 242 aaPredicted RBP13.72□□□□□ -0.21
EIF3B-209ENST00000468250 CCDC88BA6NC98 1476 aa13.72□□□□□ -0.21
EIF3B-209ENST00000468250 EIF4G3O43432 1585 aaKnown RBP13.7□□□□□ -0.22
EIF3B-209ENST00000468250 DNMBPQ6XZF7 1577 aa13.67□□□□□ -0.22
EIF3B-209ENST00000468250 FBLN2P98095 1184 aa13.67□□□□□ -0.22
EIF3B-209ENST00000468250 AQRO60306 1485 aaKnown RBP eCLIP13.64□□□□□ -0.236e-9■■■■□ 22.8
EIF3B-209ENST00000468250 CHD1O14646 1710 aa13.64□□□□□ -0.23
EIF3B-209ENST00000468250 ARAP1Q96P48 1450 aa13.62□□□□□ -0.23
EIF3B-209ENST00000468250 TARBP1Q13395 1621 aaKnown RBP13.61□□□□□ -0.23
EIF3B-209ENST00000468250 POLA1P09884 1462 aaPredicted RBP13.57□□□□□ -0.24
EIF3B-209ENST00000468250 SOGA1O94964 1423 aa13.55□□□□□ -0.24
EIF3B-209ENST00000468250 AEBP2Q6ZN18 517 aaPredicted RBP13.54□□□□□ -0.24
EIF3B-209ENST00000468250 CHMP7Q8WUX9 453 aaPredicted RBP13.54□□□□□ -0.24
EIF3B-209ENST00000468250 TDRD9Q8NDG6 1382 aaKnown RBP13.53□□□□□ -0.24
EIF3B-209ENST00000468250 WDR97A6NE52 1622 aa13.53□□□□□ -0.24
EIF3B-209ENST00000468250 RAD54L2Q9Y4B4 1467 aa13.52□□□□□ -0.25
EIF3B-209ENST00000468250 SYNJ1O43426 1573 aa13.5□□□□□ -0.25
EIF3B-209ENST00000468250 SNAPC4Q5SXM2 1469 aa13.5□□□□□ -0.25
EIF3B-209ENST00000468250 MAGI1Q96QZ7 1491 aaPredicted RBP13.48□□□□□ -0.25
EIF3B-209ENST00000468250 CLASP1Q7Z460 1538 aa13.48□□□□□ -0.25
EIF3B-209ENST00000468250 GRIN2BQ13224 1484 aa13.46□□□□□ -0.25
EIF3B-209ENST00000468250 FGD5Q6ZNL6 1462 aa13.45□□□□□ -0.26
EIF3B-209ENST00000468250 SYNJ2O15056 1496 aa13.43□□□□□ -0.26
EIF3B-209ENST00000468250 GAPVD1Q14C86 1478 aa13.39□□□□□ -0.27
EIF3B-209ENST00000468250 CUX1P39880 1505 aa13.39□□□□□ -0.27
EIF3B-209ENST00000468250 PBRM1Q86U86 1689 aa13.35□□□□□ -0.27
EIF3B-209ENST00000468250 ABCA10Q8WWZ4 1543 aa13.3□□□□□ -0.28
EIF3B-209ENST00000468250 ABCA5Q8WWZ7 1642 aa13.27□□□□□ -0.29
EIF3B-209ENST00000468250 GRIN2AQ12879 1464 aa13.26□□□□□ -0.29
EIF3B-209ENST00000468250 NUP160Q12769 1436 aa13.22□□□□□ -0.29
EIF3B-209ENST00000468250 WRNQ14191 1432 aaPredicted RBP eCLIP13.22□□□□□ -0.29
EIF3B-209ENST00000468250 CEP170Q5SW79 1584 aa13.22□□□□□ -0.29
EIF3B-209ENST00000468250 ERCC6L2Q5T890 1561 aa13.21□□□□□ -0.29
EIF3B-209ENST00000468250 FHAD1B1AJZ9 1412 aa13.2□□□□□ -0.3
EIF3B-209ENST00000468250 ADAMTS12P58397 1594 aa13.2□□□□□ -0.3
EIF3B-209ENST00000468250 SHROOM2Q13796 1616 aa13.17□□□□□ -0.3
EIF3B-209ENST00000468250 NPM1P06748 294 aaKnown RBP eCLIP13.16□□□□□ -0.3
EIF3B-209ENST00000468250 ERICH3Q5RHP9 1530 aa13.14□□□□□ -0.31
EIF3B-209ENST00000468250 JPH4Q96JJ6 628 aa13.14□□□□□ -0.31
EIF3B-209ENST00000468250 PRG4Q92954 1404 aaPredicted RBP13.13□□□□□ -0.31
EIF3B-209ENST00000468250 KIF13AQ9H1H9 1805 aa13.13□□□□□ -0.31
EIF3B-209ENST00000468250 TOP2BQ02880 1626 aa13.13□□□□□ -0.31
EIF3B-209ENST00000468250 BIVM-ERCC5R4GMW8 1640 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms