RNA–Protein interactions for RNA: ENST00000592737.5

NCLN-208, Transcript of nicalin, humanhuman

TSL 3

Gene NCLN, Length 2,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-208ENST00000592737 NISCHQ9Y2I1 1504 aa33.22■■■□□ 2.91
NCLN-208ENST00000592737 SHROOM4Q9ULL8 1493 aa29.29■■■□□ 2.28
NCLN-208ENST00000592737 SUPT5HO00267 1087 aaKnown RBP29.04■■■□□ 2.24
NCLN-208ENST00000592737 HRCP23327 699 aa28.53■■■□□ 2.16
NCLN-208ENST00000592737 MYO15BQ96JP2 1530 aa28.32■■■□□ 2.12
NCLN-208ENST00000592737 CHIC1Q5VXU3 224 aa28.29■■■□□ 2.12
NCLN-208ENST00000592737 PCGF6Q9BYE7 350 aa28.27■■■□□ 2.12
NCLN-208ENST00000592737 ZCCHC6Q5VYS8 1495 aaKnown RBP28.17■■■□□ 2.1
NCLN-208ENST00000592737 PPARGC1BQ86YN6 1023 aaKnown RBP28.04■■■□□ 2.08
NCLN-208ENST00000592737 DCAF8L2P0C7V8 631 aa28.01■■■□□ 2.07
NCLN-208ENST00000592737 CCDC180Q9P1Z9 1646 aa27.76■■■□□ 2.04
NCLN-208ENST00000592737 LOC105371045A0A1W2PR82 267 aa27.67■■■□□ 2.02
NCLN-208ENST00000592737 DCAF1Q9Y4B6 1507 aa27.59■■■□□ 2.01
NCLN-208ENST00000592737 TRIM26Q12899 539 aaPredicted RBP27.41■■□□□ 1.98
NCLN-208ENST00000592737 ZEB1P37275 1124 aaPredicted RBP27.05■■□□□ 1.92
NCLN-208ENST00000592737 FAM9AQ8IZU1 332 aaPredicted RBP26.89■■□□□ 1.9
NCLN-208ENST00000592737 PELP1Q8IZL8 1130 aaKnown RBP26.88■■□□□ 1.89
NCLN-208ENST00000592737 TRIM41Q8WV44 630 aa26.88■■□□□ 1.89
NCLN-208ENST00000592737 EHMT2Q96KQ7 1210 aa26.83■■□□□ 1.89
NCLN-208ENST00000592737 SCAF1Q9H7N4 1312 aaKnown RBP26.76■■□□□ 1.87
NCLN-208ENST00000592737 ABCC9O60706 1549 aa26.71■■□□□ 1.87
NCLN-208ENST00000592737 RSF1Q96T23 1441 aaPredicted RBP26.61■■□□□ 1.85
NCLN-208ENST00000592737 SCRIBQ14160 1630 aa26.49■■□□□ 1.83
NCLN-208ENST00000592737 RB1CC1Q8TDY2 1594 aa26.47■■□□□ 1.83
NCLN-208ENST00000592737 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.36■■□□□ 1.81
NCLN-208ENST00000592737 CCER1Q8TC90 406 aaPredicted RBP26.33■■□□□ 1.81
NCLN-208ENST00000592737 ACIN1Q9UKV3 1341 aaKnown RBP26.26■■□□□ 1.79
NCLN-208ENST00000592737 NEUROD1Q13562 356 aa26.22■■□□□ 1.79
NCLN-208ENST00000592737 TTBK1Q5TCY1 1321 aaPredicted RBP26.1■■□□□ 1.77
NCLN-208ENST00000592737 DIEXFQ68CQ4 756 aaKnown RBP26.1■■□□□ 1.77
NCLN-208ENST00000592737 GTF3C3Q9Y5Q9 886 aa26.08■■□□□ 1.77
NCLN-208ENST00000592737 CENPBP07199 599 aaPredicted RBP26.08■■□□□ 1.76
NCLN-208ENST00000592737 CECR2Q9BXF3 1484 aa26.03■■□□□ 1.76
NCLN-208ENST00000592737 MROH2BQ7Z745 1585 aa25.95■■□□□ 1.75
NCLN-208ENST00000592737 WIZO95785 1651 aa25.87■■□□□ 1.73
NCLN-208ENST00000592737 YTHDC1Q96MU7 727 aaKnown RBP25.74■■□□□ 1.71
NCLN-208ENST00000592737 MYT1Q01538 1121 aa25.69■■□□□ 1.7
NCLN-208ENST00000592737 ZNF316A6NFI3 1004 aaPredicted RBP25.68■■□□□ 1.7
NCLN-208ENST00000592737 CEP162Q5TB80 1403 aa25.65■■□□□ 1.7
NCLN-208ENST00000592737 WRNQ14191 1432 aaPredicted RBP eCLIP25.62■■□□□ 1.69
NCLN-208ENST00000592737 BAZ1AQ9NRL2 1556 aaPredicted RBP25.62■■□□□ 1.69
NCLN-208ENST00000592737 NACADO15069 1562 aa25.62■■□□□ 1.69
NCLN-208ENST00000592737 ABCC8Q09428 1581 aa25.61■■□□□ 1.69
NCLN-208ENST00000592737 UBTFP17480 764 aaKnown RBP25.59■■□□□ 1.69
NCLN-208ENST00000592737 CCDC88BA6NC98 1476 aa25.59■■□□□ 1.69
NCLN-208ENST00000592737 EIF4G1Q04637 1599 aaKnown RBP25.56■■□□□ 1.68
NCLN-208ENST00000592737 SOGA1O94964 1423 aa25.5■■□□□ 1.67
NCLN-208ENST00000592737 TNIKQ9UKE5 1360 aa25.49■■□□□ 1.67
NCLN-208ENST00000592737 MIER1Q8N108 512 aa25.45■■□□□ 1.67
NCLN-208ENST00000592737 HNRNPUL2Q1KMD3 747 aaKnown RBP25.45■■□□□ 1.66
NCLN-208ENST00000592737 CSRNP3Q8WYN3 585 aa25.44■■□□□ 1.66
NCLN-208ENST00000592737 RUSC2Q8N2Y8 1516 aa25.35■■□□□ 1.65
NCLN-208ENST00000592737 TOP2AP11388 1531 aaKnown RBP25.34■■□□□ 1.65
NCLN-208ENST00000592737 EEA1Q15075 1411 aa25.27■■□□□ 1.64
NCLN-208ENST00000592737 SMARCA2P51531 1590 aa25.26■■□□□ 1.63
NCLN-208ENST00000592737 GOLGA3Q08378 1498 aa25.25■■□□□ 1.63
NCLN-208ENST00000592737 SMARCA4P51532 1647 aa25.17■■□□□ 1.62
NCLN-208ENST00000592737 APLP2Q06481 763 aa25.17■■□□□ 1.62
NCLN-208ENST00000592737 RANGAP1P46060 587 aaPredicted RBP25.15■■□□□ 1.62
NCLN-208ENST00000592737 CLIP1P30622 1438 aa25.06■■□□□ 1.6
NCLN-208ENST00000592737 CEP164Q9UPV0 1460 aa25.02■■□□□ 1.6
NCLN-208ENST00000592737 VPS8Q8N3P4 1428 aa24.96■■□□□ 1.59
NCLN-208ENST00000592737 SUPT16HQ9Y5B9 1047 aaKnown RBP24.88■■□□□ 1.57
NCLN-208ENST00000592737 KIF21BO75037 1637 aa24.88■■□□□ 1.57
NCLN-208ENST00000592737 SYNJ1O43426 1573 aa24.84■■□□□ 1.57
NCLN-208ENST00000592737 RAPGEF2Q9Y4G8 1499 aa24.81■■□□□ 1.56
NCLN-208ENST00000592737 PABPN1Q86U42 306 aaKnown RBP eCLIP24.8■■□□□ 1.568e-6■□□□□ 8.9
NCLN-208ENST00000592737 CLSPNQ9HAW4 1339 aa24.79■■□□□ 1.56
NCLN-208ENST00000592737 DHX57Q6P158 1386 aaKnown RBP24.77■■□□□ 1.56
NCLN-208ENST00000592737 UNC13AQ9UPW8 1703 aa24.77■■□□□ 1.56
NCLN-208ENST00000592737 BAZ1BQ9UIG0 1483 aaKnown RBP24.74■■□□□ 1.55
NCLN-208ENST00000592737 TSHZ2Q9NRE2 1034 aa24.64■■□□□ 1.53
NCLN-208ENST00000592737 KANK4Q5T7N3 995 aaPredicted RBP24.63■■□□□ 1.53
NCLN-208ENST00000592737 ITGAEP38570 1179 aa24.62■■□□□ 1.53
NCLN-208ENST00000592737 BCANQ96GW7 911 aa24.55■■□□□ 1.52
NCLN-208ENST00000592737 KCNH8Q96L42 1107 aa24.54■■□□□ 1.52
NCLN-208ENST00000592737 ANP32EQ9BTT0 268 aa24.5■■□□□ 1.51
NCLN-208ENST00000592737 ARAP1Q96P48 1450 aa24.49■■□□□ 1.51
NCLN-208ENST00000592737 PEG3Q9GZU2 1588 aa24.48■■□□□ 1.51
NCLN-208ENST00000592737 ATAD2BQ9ULI0 1458 aa24.41■■□□□ 1.5
NCLN-208ENST00000592737 BICRAQ9NZM4 1560 aa24.41■■□□□ 1.5
NCLN-208ENST00000592737 RRBP1Q9P2E9 1410 aaKnown RBP24.41■■□□□ 1.5
NCLN-208ENST00000592737 FKBP8Q14318 412 aa24.4■■□□□ 1.5
NCLN-208ENST00000592737 CCNB3Q8WWL7 1395 aa24.4■■□□□ 1.5
NCLN-208ENST00000592737 TOP2BQ02880 1626 aa24.39■■□□□ 1.5
NCLN-208ENST00000592737 DDX10Q13206 875 aaKnown RBP24.36■■□□□ 1.49
NCLN-208ENST00000592737 ERICH3Q5RHP9 1530 aa24.36■■□□□ 1.49
NCLN-208ENST00000592737 PRXQ9BXM0 1461 aa24.35■■□□□ 1.49
NCLN-208ENST00000592737 RAB3GAP2Q9H2M9 1393 aa24.3■■□□□ 1.48
NCLN-208ENST00000592737 CUX2O14529 1486 aa24.27■■□□□ 1.48
NCLN-208ENST00000592737 NEFLP07196 543 aa24.27■■□□□ 1.48
NCLN-208ENST00000592737 BIVM-ERCC5R4GMW8 1640 aa24.23■■□□□ 1.47
NCLN-208ENST00000592737 SIN3AQ96ST3 1273 aa24.23■■□□□ 1.47
NCLN-208ENST00000592737 HIRIP3Q9BW71 556 aaPredicted RBP24.21■■□□□ 1.47
NCLN-208ENST00000592737 KIF27Q86VH2 1401 aa24.2■■□□□ 1.46
NCLN-208ENST00000592737 TRIM52Q96A61 297 aa24.19■■□□□ 1.46
NCLN-208ENST00000592737 MAPKBP1O60336 1514 aa24.19■■□□□ 1.46
NCLN-208ENST00000592737 ARHGAP35Q9NRY4 1499 aa24.18■■□□□ 1.46
NCLN-208ENST00000592737 FAM50AQ14320 339 aaKnown RBP24.18■■□□□ 1.46
NCLN-208ENST00000592737 SETD5Q9C0A6 1442 aa24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms