Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC30.16■■■□□ 2.42
TNFRSF11AQ9Y6Q6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
TNFRSF11AQ9Y6Q6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
TNFRSF11AQ9Y6Q6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC30.15■■■□□ 2.42
TNFRSF11AQ9Y6Q6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.42
TNFRSF11AQ9Y6Q6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC30.14■■■□□ 2.42
TNFRSF11AQ9Y6Q6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
TNFRSF11AQ9Y6Q6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.14■■■□□ 2.42
TNFRSF11AQ9Y6Q6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.42
TNFRSF11AQ9Y6Q6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC30.14■■■□□ 2.42
TNFRSF11AQ9Y6Q6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
TNFRSF11AQ9Y6Q6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
TNFRSF11AQ9Y6Q6 GFER-205ENST00000569451 517 ntTSL 5 BASIC30.13■■■□□ 2.41
TNFRSF11AQ9Y6Q6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
TNFRSF11AQ9Y6Q6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
TNFRSF11AQ9Y6Q6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.12■■■□□ 2.41
TNFRSF11AQ9Y6Q6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC30.12■■■□□ 2.41
TNFRSF11AQ9Y6Q6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
TNFRSF11AQ9Y6Q6 SPCS2P3-201ENST00000500401 656 ntBASIC30.12■■■□□ 2.41
TNFRSF11AQ9Y6Q6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
TNFRSF11AQ9Y6Q6 MIR3960-201ENST00000583311 91 ntBASIC30.11■■■□□ 2.41
TNFRSF11AQ9Y6Q6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC30.11■■■□□ 2.41
TNFRSF11AQ9Y6Q6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
TNFRSF11AQ9Y6Q6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.1■■■□□ 2.41
TNFRSF11AQ9Y6Q6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
TNFRSF11AQ9Y6Q6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
TNFRSF11AQ9Y6Q6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
TNFRSF11AQ9Y6Q6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
TNFRSF11AQ9Y6Q6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
TNFRSF11AQ9Y6Q6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
TNFRSF11AQ9Y6Q6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC30.07■■■□□ 2.4
TNFRSF11AQ9Y6Q6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
TNFRSF11AQ9Y6Q6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
TNFRSF11AQ9Y6Q6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
TNFRSF11AQ9Y6Q6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
TNFRSF11AQ9Y6Q6 AC129492.7-201ENST00000622992 756 ntBASIC30.06■■■□□ 2.4
TNFRSF11AQ9Y6Q6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.06■■■□□ 2.4
TNFRSF11AQ9Y6Q6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
TNFRSF11AQ9Y6Q6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC30.05■■■□□ 2.4
TNFRSF11AQ9Y6Q6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
TNFRSF11AQ9Y6Q6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC30.04■■■□□ 2.4
TNFRSF11AQ9Y6Q6 AC004987.1-201ENST00000428627 508 ntBASIC30.03■■■□□ 2.4
TNFRSF11AQ9Y6Q6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
TNFRSF11AQ9Y6Q6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
TNFRSF11AQ9Y6Q6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC30.03■■■□□ 2.4
TNFRSF11AQ9Y6Q6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
TNFRSF11AQ9Y6Q6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC30.02■■■□□ 2.4
TNFRSF11AQ9Y6Q6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC30.02■■■□□ 2.4
TNFRSF11AQ9Y6Q6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
TNFRSF11AQ9Y6Q6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
TNFRSF11AQ9Y6Q6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
TNFRSF11AQ9Y6Q6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
TNFRSF11AQ9Y6Q6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
TNFRSF11AQ9Y6Q6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
TNFRSF11AQ9Y6Q6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
TNFRSF11AQ9Y6Q6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
TNFRSF11AQ9Y6Q6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC30■■■□□ 2.39
TNFRSF11AQ9Y6Q6 AL033527.3-201ENST00000566366 1196 ntBASIC30■■■□□ 2.39
TNFRSF11AQ9Y6Q6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC30■■■□□ 2.39
TNFRSF11AQ9Y6Q6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC30■■■□□ 2.39
TNFRSF11AQ9Y6Q6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC29.99■■■□□ 2.39
TNFRSF11AQ9Y6Q6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
TNFRSF11AQ9Y6Q6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
TNFRSF11AQ9Y6Q6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
TNFRSF11AQ9Y6Q6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
TNFRSF11AQ9Y6Q6 AC012354.3-201ENST00000623734 483 ntBASIC29.99■■■□□ 2.39
TNFRSF11AQ9Y6Q6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC29.99■■■□□ 2.39
TNFRSF11AQ9Y6Q6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC29.99■■■□□ 2.39
TNFRSF11AQ9Y6Q6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
TNFRSF11AQ9Y6Q6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC29.98■■■□□ 2.39
TNFRSF11AQ9Y6Q6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
TNFRSF11AQ9Y6Q6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC29.98■■■□□ 2.39
TNFRSF11AQ9Y6Q6 DUX4L9-201ENST00000449051 1259 ntBASIC29.97■■■□□ 2.39
TNFRSF11AQ9Y6Q6 HES4-204ENST00000484667 667 ntTSL 3 BASIC29.97■■■□□ 2.39
TNFRSF11AQ9Y6Q6 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
TNFRSF11AQ9Y6Q6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
TNFRSF11AQ9Y6Q6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
TNFRSF11AQ9Y6Q6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
TNFRSF11AQ9Y6Q6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
TNFRSF11AQ9Y6Q6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC29.96■■■□□ 2.39
TNFRSF11AQ9Y6Q6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
TNFRSF11AQ9Y6Q6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
TNFRSF11AQ9Y6Q6 ATP5G2P3-201ENST00000429083 425 ntBASIC29.96■■■□□ 2.39
TNFRSF11AQ9Y6Q6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
TNFRSF11AQ9Y6Q6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
TNFRSF11AQ9Y6Q6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
TNFRSF11AQ9Y6Q6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC29.95■■■□□ 2.39
TNFRSF11AQ9Y6Q6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
TNFRSF11AQ9Y6Q6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
TNFRSF11AQ9Y6Q6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
TNFRSF11AQ9Y6Q6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
TNFRSF11AQ9Y6Q6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.39
TNFRSF11AQ9Y6Q6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
TNFRSF11AQ9Y6Q6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
TNFRSF11AQ9Y6Q6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
TNFRSF11AQ9Y6Q6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
TNFRSF11AQ9Y6Q6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC29.94■■■□□ 2.38
TNFRSF11AQ9Y6Q6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC29.93■■■□□ 2.38
TNFRSF11AQ9Y6Q6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC29.93■■■□□ 2.38
TNFRSF11AQ9Y6Q6 DUX4L18-201ENST00000553347 1267 ntBASIC29.93■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms