Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SNCAIPQ9Y6H5 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
SNCAIPQ9Y6H5 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC28.81■■■□□ 2.2
SNCAIPQ9Y6H5 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SNCAIPQ9Y6H5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SNCAIPQ9Y6H5 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SNCAIPQ9Y6H5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
SNCAIPQ9Y6H5 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC28.8■■■□□ 2.2
SNCAIPQ9Y6H5 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SNCAIPQ9Y6H5 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
SNCAIPQ9Y6H5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC28.8■■■□□ 2.2
SNCAIPQ9Y6H5 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.79■■■□□ 2.2
SNCAIPQ9Y6H5 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
SNCAIPQ9Y6H5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
SNCAIPQ9Y6H5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC28.79■■■□□ 2.2
SNCAIPQ9Y6H5 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
SNCAIPQ9Y6H5 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SNCAIPQ9Y6H5 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SNCAIPQ9Y6H5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
SNCAIPQ9Y6H5 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SNCAIPQ9Y6H5 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
SNCAIPQ9Y6H5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC28.78■■■□□ 2.2
SNCAIPQ9Y6H5 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC28.78■■■□□ 2.2
SNCAIPQ9Y6H5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC28.78■■■□□ 2.2
SNCAIPQ9Y6H5 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SNCAIPQ9Y6H5 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
SNCAIPQ9Y6H5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC28.77■■■□□ 2.2
SNCAIPQ9Y6H5 AC239859.2-201ENST00000444165 318 ntBASIC28.77■■■□□ 2.2
SNCAIPQ9Y6H5 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
SNCAIPQ9Y6H5 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC28.76■■■□□ 2.19
SNCAIPQ9Y6H5 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC28.75■■■□□ 2.19
SNCAIPQ9Y6H5 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SNCAIPQ9Y6H5 RPS2P7-201ENST00000447334 885 ntBASIC28.75■■■□□ 2.19
SNCAIPQ9Y6H5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC28.75■■■□□ 2.19
SNCAIPQ9Y6H5 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SNCAIPQ9Y6H5 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.75■■■□□ 2.19
SNCAIPQ9Y6H5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC28.74■■■□□ 2.19
SNCAIPQ9Y6H5 LONRF2P2-201ENST00000439212 571 ntBASIC28.74■■■□□ 2.19
SNCAIPQ9Y6H5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC28.74■■■□□ 2.19
SNCAIPQ9Y6H5 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SNCAIPQ9Y6H5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
SNCAIPQ9Y6H5 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
SNCAIPQ9Y6H5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SNCAIPQ9Y6H5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC28.73■■■□□ 2.19
SNCAIPQ9Y6H5 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
SNCAIPQ9Y6H5 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SNCAIPQ9Y6H5 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SNCAIPQ9Y6H5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SNCAIPQ9Y6H5 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SNCAIPQ9Y6H5 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
SNCAIPQ9Y6H5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SNCAIPQ9Y6H5 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
SNCAIPQ9Y6H5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SNCAIPQ9Y6H5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC28.71■■■□□ 2.19
SNCAIPQ9Y6H5 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SNCAIPQ9Y6H5 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SNCAIPQ9Y6H5 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SNCAIPQ9Y6H5 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.69■■■□□ 2.18
SNCAIPQ9Y6H5 Z92544.1-202ENST00000571933 1220 ntBASIC28.69■■■□□ 2.18
SNCAIPQ9Y6H5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SNCAIPQ9Y6H5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC28.69■■■□□ 2.18
SNCAIPQ9Y6H5 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SNCAIPQ9Y6H5 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC28.69■■■□□ 2.18
SNCAIPQ9Y6H5 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SNCAIPQ9Y6H5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SNCAIPQ9Y6H5 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC28.68■■■□□ 2.18
SNCAIPQ9Y6H5 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SNCAIPQ9Y6H5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC28.68■■■□□ 2.18
SNCAIPQ9Y6H5 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC28.68■■■□□ 2.18
SNCAIPQ9Y6H5 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SNCAIPQ9Y6H5 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
SNCAIPQ9Y6H5 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SNCAIPQ9Y6H5 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC28.67■■■□□ 2.18
SNCAIPQ9Y6H5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
SNCAIPQ9Y6H5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC28.67■■■□□ 2.18
SNCAIPQ9Y6H5 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SNCAIPQ9Y6H5 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SNCAIPQ9Y6H5 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SNCAIPQ9Y6H5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.66■■■□□ 2.18
SNCAIPQ9Y6H5 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC28.66■■■□□ 2.18
SNCAIPQ9Y6H5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
SNCAIPQ9Y6H5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC28.66■■■□□ 2.18
SNCAIPQ9Y6H5 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.66■■■□□ 2.18
SNCAIPQ9Y6H5 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC28.65■■■□□ 2.18
SNCAIPQ9Y6H5 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.65■■■□□ 2.18
SNCAIPQ9Y6H5 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SNCAIPQ9Y6H5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
SNCAIPQ9Y6H5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.64■■■□□ 2.18
SNCAIPQ9Y6H5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.18
SNCAIPQ9Y6H5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SNCAIPQ9Y6H5 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.17
SNCAIPQ9Y6H5 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC28.63■■■□□ 2.17
SNCAIPQ9Y6H5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC28.63■■■□□ 2.17
SNCAIPQ9Y6H5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
SNCAIPQ9Y6H5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
SNCAIPQ9Y6H5 ABCB10P1-201ENST00000614297 2181 ntBASIC28.61■■■□□ 2.17
SNCAIPQ9Y6H5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
SNCAIPQ9Y6H5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
SNCAIPQ9Y6H5 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC28.61■■■□□ 2.17
SNCAIPQ9Y6H5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms