Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGB3Q9Y5G1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGB3Q9Y5G1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
PCDHGB3Q9Y5G1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.97■■□□□ 1.27
PCDHGB3Q9Y5G1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGB3Q9Y5G1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGB3Q9Y5G1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGB3Q9Y5G1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDHGB3Q9Y5G1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGB3Q9Y5G1 AC142472.1-201ENST00000612013 1741 ntBASIC22.96■■□□□ 1.27
PCDHGB3Q9Y5G1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGB3Q9Y5G1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGB3Q9Y5G1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGB3Q9Y5G1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGB3Q9Y5G1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGB3Q9Y5G1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.95■■□□□ 1.26
PCDHGB3Q9Y5G1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGB3Q9Y5G1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGB3Q9Y5G1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGB3Q9Y5G1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGB3Q9Y5G1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.94■■□□□ 1.26
PCDHGB3Q9Y5G1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.94■■□□□ 1.26
PCDHGB3Q9Y5G1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGB3Q9Y5G1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGB3Q9Y5G1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
PCDHGB3Q9Y5G1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGB3Q9Y5G1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGB3Q9Y5G1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
PCDHGB3Q9Y5G1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.93■■□□□ 1.26
PCDHGB3Q9Y5G1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGB3Q9Y5G1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGB3Q9Y5G1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGB3Q9Y5G1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.92■■□□□ 1.26
PCDHGB3Q9Y5G1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
PCDHGB3Q9Y5G1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
PCDHGB3Q9Y5G1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.92■■□□□ 1.26
PCDHGB3Q9Y5G1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGB3Q9Y5G1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDHGB3Q9Y5G1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.91■■□□□ 1.26
PCDHGB3Q9Y5G1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGB3Q9Y5G1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGB3Q9Y5G1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGB3Q9Y5G1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGB3Q9Y5G1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGB3Q9Y5G1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDHGB3Q9Y5G1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
PCDHGB3Q9Y5G1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGB3Q9Y5G1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGB3Q9Y5G1 AC126177.7-201ENST00000547904 679 ntBASIC22.9■■□□□ 1.26
PCDHGB3Q9Y5G1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGB3Q9Y5G1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.9■■□□□ 1.26
PCDHGB3Q9Y5G1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDHGB3Q9Y5G1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
PCDHGB3Q9Y5G1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
PCDHGB3Q9Y5G1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.89■■□□□ 1.26
PCDHGB3Q9Y5G1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDHGB3Q9Y5G1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHGB3Q9Y5G1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHGB3Q9Y5G1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGB3Q9Y5G1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
PCDHGB3Q9Y5G1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGB3Q9Y5G1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDHGB3Q9Y5G1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.88■■□□□ 1.25
PCDHGB3Q9Y5G1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGB3Q9Y5G1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGB3Q9Y5G1 GPX1-201ENST00000419349 1106 ntBASIC22.87■■□□□ 1.25
PCDHGB3Q9Y5G1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
PCDHGB3Q9Y5G1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGB3Q9Y5G1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.87■■□□□ 1.25
PCDHGB3Q9Y5G1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGB3Q9Y5G1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.87■■□□□ 1.25
PCDHGB3Q9Y5G1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.86■■□□□ 1.25
PCDHGB3Q9Y5G1 AL359258.2-201ENST00000564063 1566 ntBASIC22.86■■□□□ 1.25
PCDHGB3Q9Y5G1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGB3Q9Y5G1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGB3Q9Y5G1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.86■■□□□ 1.25
PCDHGB3Q9Y5G1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
PCDHGB3Q9Y5G1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGB3Q9Y5G1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
PCDHGB3Q9Y5G1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGB3Q9Y5G1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
PCDHGB3Q9Y5G1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.85■■□□□ 1.25
PCDHGB3Q9Y5G1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGB3Q9Y5G1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGB3Q9Y5G1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGB3Q9Y5G1 RNF126P1-201ENST00000567452 1320 ntBASIC22.84■■□□□ 1.25
PCDHGB3Q9Y5G1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDHGB3Q9Y5G1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGB3Q9Y5G1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGB3Q9Y5G1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGB3Q9Y5G1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDHGB3Q9Y5G1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGB3Q9Y5G1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGB3Q9Y5G1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.83■■□□□ 1.25
PCDHGB3Q9Y5G1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGB3Q9Y5G1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGB3Q9Y5G1 RARRES2P2-201ENST00000394842 485 ntBASIC22.83■■□□□ 1.25
PCDHGB3Q9Y5G1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.24
PCDHGB3Q9Y5G1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGB3Q9Y5G1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms