Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HHLA3Q9XRX5 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HHLA3Q9XRX5 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HHLA3Q9XRX5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HHLA3Q9XRX5 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.68■□□□□ 0.42
HHLA3Q9XRX5 DUSP8P4-201ENST00000399538 1761 ntBASIC17.68■□□□□ 0.42
HHLA3Q9XRX5 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HHLA3Q9XRX5 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HHLA3Q9XRX5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HHLA3Q9XRX5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HHLA3Q9XRX5 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HHLA3Q9XRX5 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HHLA3Q9XRX5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HHLA3Q9XRX5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HHLA3Q9XRX5 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HHLA3Q9XRX5 MIR3648-2-201ENST00000581792 180 ntBASIC17.66■□□□□ 0.42
HHLA3Q9XRX5 MIR3648-1-201ENST00000615959 180 ntBASIC17.66■□□□□ 0.42
HHLA3Q9XRX5 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.66■□□□□ 0.42
HHLA3Q9XRX5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.66■□□□□ 0.42
HHLA3Q9XRX5 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HHLA3Q9XRX5 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HHLA3Q9XRX5 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HHLA3Q9XRX5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HHLA3Q9XRX5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HHLA3Q9XRX5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.65■□□□□ 0.42
HHLA3Q9XRX5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HHLA3Q9XRX5 CR559946.2-201ENST00000623684 991 ntBASIC17.65■□□□□ 0.42
HHLA3Q9XRX5 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HHLA3Q9XRX5 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HHLA3Q9XRX5 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HHLA3Q9XRX5 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HHLA3Q9XRX5 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HHLA3Q9XRX5 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HHLA3Q9XRX5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HHLA3Q9XRX5 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HHLA3Q9XRX5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HHLA3Q9XRX5 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HHLA3Q9XRX5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HHLA3Q9XRX5 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HHLA3Q9XRX5 AC133561.1-201ENST00000568600 2415 ntBASIC17.63■□□□□ 0.41
HHLA3Q9XRX5 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.63■□□□□ 0.41
HHLA3Q9XRX5 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HHLA3Q9XRX5 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HHLA3Q9XRX5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HHLA3Q9XRX5 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HHLA3Q9XRX5 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HHLA3Q9XRX5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HHLA3Q9XRX5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HHLA3Q9XRX5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.62■□□□□ 0.41
HHLA3Q9XRX5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.62■□□□□ 0.41
HHLA3Q9XRX5 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.62■□□□□ 0.41
HHLA3Q9XRX5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HHLA3Q9XRX5 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HHLA3Q9XRX5 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.61■□□□□ 0.41
HHLA3Q9XRX5 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HHLA3Q9XRX5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HHLA3Q9XRX5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
HHLA3Q9XRX5 AC016575.1-201ENST00000607026 382 ntBASIC17.61■□□□□ 0.41
HHLA3Q9XRX5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HHLA3Q9XRX5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
HHLA3Q9XRX5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HHLA3Q9XRX5 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HHLA3Q9XRX5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.61■□□□□ 0.41
HHLA3Q9XRX5 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HHLA3Q9XRX5 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.6■□□□□ 0.41
HHLA3Q9XRX5 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HHLA3Q9XRX5 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HHLA3Q9XRX5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HHLA3Q9XRX5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HHLA3Q9XRX5 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HHLA3Q9XRX5 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HHLA3Q9XRX5 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HHLA3Q9XRX5 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
HHLA3Q9XRX5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HHLA3Q9XRX5 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HHLA3Q9XRX5 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
HHLA3Q9XRX5 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HHLA3Q9XRX5 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
HHLA3Q9XRX5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HHLA3Q9XRX5 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
HHLA3Q9XRX5 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.58■□□□□ 0.4
HHLA3Q9XRX5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
HHLA3Q9XRX5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HHLA3Q9XRX5 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.58■□□□□ 0.4
HHLA3Q9XRX5 AC092803.2-201ENST00000564287 1899 ntBASIC17.57■□□□□ 0.4
HHLA3Q9XRX5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC17.57■□□□□ 0.4
HHLA3Q9XRX5 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HHLA3Q9XRX5 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.57■□□□□ 0.4
HHLA3Q9XRX5 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.57■□□□□ 0.4
HHLA3Q9XRX5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HHLA3Q9XRX5 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.57■□□□□ 0.4
HHLA3Q9XRX5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HHLA3Q9XRX5 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.56■□□□□ 0.4
HHLA3Q9XRX5 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HHLA3Q9XRX5 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HHLA3Q9XRX5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.56■□□□□ 0.4
HHLA3Q9XRX5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HHLA3Q9XRX5 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.56■□□□□ 0.4
HHLA3Q9XRX5 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HHLA3Q9XRX5 AC148477.6-201ENST00000623746 465 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms