Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC40.26■■■■■ 4.04
RIMBP3Q9UFD9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC40.26■■■■■ 4.04
RIMBP3Q9UFD9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC40.25■■■■■ 4.03
RIMBP3Q9UFD9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC40.25■■■■■ 4.03
RIMBP3Q9UFD9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC40.24■■■■■ 4.03
RIMBP3Q9UFD9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC40.23■■■■■ 4.03
RIMBP3Q9UFD9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC40.23■■■■■ 4.03
RIMBP3Q9UFD9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC40.22■■■■■ 4.03
RIMBP3Q9UFD9 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC40.22■■■■■ 4.03
RIMBP3Q9UFD9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC40.21■■■■■ 4.03
RIMBP3Q9UFD9 AC021242.3-201ENST00000607598 1377 ntBASIC40.21■■■■■ 4.03
RIMBP3Q9UFD9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC40.21■■■■■ 4.03
RIMBP3Q9UFD9 MIR3621-201ENST00000580529 85 ntBASIC40.21■■■■■ 4.03
RIMBP3Q9UFD9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC40.21■■■■■ 4.03
RIMBP3Q9UFD9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC40.2■■■■■ 4.03
RIMBP3Q9UFD9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC40.2■■■■■ 4.03
RIMBP3Q9UFD9 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC40.19■■■■■ 4.02
RIMBP3Q9UFD9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC40.18■■■■■ 4.02
RIMBP3Q9UFD9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC40.18■■■■■ 4.02
RIMBP3Q9UFD9 AC137630.3-201ENST00000607245 391 ntBASIC40.18■■■■■ 4.02
RIMBP3Q9UFD9 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC40.18■■■■■ 4.02
RIMBP3Q9UFD9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC40.17■■■■■ 4.02
RIMBP3Q9UFD9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC40.17■■■■■ 4.02
RIMBP3Q9UFD9 AL512631.2-201ENST00000604634 923 ntBASIC40.17■■■■■ 4.02
RIMBP3Q9UFD9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC40.17■■■■■ 4.02
RIMBP3Q9UFD9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC40.17■■■■■ 4.02
RIMBP3Q9UFD9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC40.16■■■■■ 4.02
RIMBP3Q9UFD9 AC142381.2-201ENST00000566120 298 ntBASIC40.16■■■■■ 4.02
RIMBP3Q9UFD9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC40.16■■■■■ 4.02
RIMBP3Q9UFD9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC40.16■■■■■ 4.02
RIMBP3Q9UFD9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC40.16■■■■■ 4.02
RIMBP3Q9UFD9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC40.16■■■■■ 4.02
RIMBP3Q9UFD9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC40.16■■■■■ 4.02
RIMBP3Q9UFD9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC40.14■■■■■ 4.02
RIMBP3Q9UFD9 AL031432.3-201ENST00000607698 485 ntBASIC40.13■■■■■ 4.02
RIMBP3Q9UFD9 AC106739.1-201ENST00000617035 715 ntBASIC40.13■■■■■ 4.02
RIMBP3Q9UFD9 SUDS3P1-201ENST00000505831 966 ntBASIC40.13■■■■■ 4.01
RIMBP3Q9UFD9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC40.13■■■■■ 4.01
RIMBP3Q9UFD9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC40.12■■■■■ 4.01
RIMBP3Q9UFD9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC40.11■■■■■ 4.01
RIMBP3Q9UFD9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC40.11■■■■■ 4.01
RIMBP3Q9UFD9 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC40.1■■■■■ 4.01
RIMBP3Q9UFD9 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC40.1■■■■■ 4.01
RIMBP3Q9UFD9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC40.09■■■■■ 4.01
RIMBP3Q9UFD9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC40.09■■■■■ 4.01
RIMBP3Q9UFD9 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC40.09■■■■■ 4.01
RIMBP3Q9UFD9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC40.09■■■■■ 4.01
RIMBP3Q9UFD9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC40.09■■■■■ 4.01
RIMBP3Q9UFD9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC40.09■■■■■ 4.01
RIMBP3Q9UFD9 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC40.08■■■■■ 4.01
RIMBP3Q9UFD9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC40.08■■■■■ 4.01
RIMBP3Q9UFD9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC40.08■■■■■ 4.01
RIMBP3Q9UFD9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC40.08■■■■■ 4.01
RIMBP3Q9UFD9 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC40.08■■■■■ 4.01
RIMBP3Q9UFD9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC40.08■■■■■ 4.01
RIMBP3Q9UFD9 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC40.07■■■■■ 4.01
RIMBP3Q9UFD9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC40.07■■■■■ 4.01
RIMBP3Q9UFD9 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC40.07■■■■■ 4.01
RIMBP3Q9UFD9 AC092028.1-203ENST00000608262 953 ntBASIC40.07■■■■■ 4.01
RIMBP3Q9UFD9 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC40.07■■■■■ 4
RIMBP3Q9UFD9 AC090192.1-201ENST00000517740 490 ntBASIC40.06■■■■■ 4
RIMBP3Q9UFD9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC40.06■■■■■ 4
RIMBP3Q9UFD9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC40.05■■■■■ 4
RIMBP3Q9UFD9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC40.05■■■■■ 4
RIMBP3Q9UFD9 RPS2P7-201ENST00000447334 885 ntBASIC40.05■■■■■ 4
RIMBP3Q9UFD9 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC40.04■■■■■ 4
RIMBP3Q9UFD9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC40.04■■■■■ 4
RIMBP3Q9UFD9 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC40.04■■■■■ 4
RIMBP3Q9UFD9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC40.04■■■■■ 4
RIMBP3Q9UFD9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC40.04■■■■■ 4
RIMBP3Q9UFD9 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC40.03■■■■■ 4
RIMBP3Q9UFD9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC40.02■■■■■ 4
RIMBP3Q9UFD9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC40.02■■■■■ 4
RIMBP3Q9UFD9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC40.02■■■■■ 4
RIMBP3Q9UFD9 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC40.01■■■■■ 4
RIMBP3Q9UFD9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC40.01■■■■■ 4
RIMBP3Q9UFD9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC40.01■■■■■ 4
RIMBP3Q9UFD9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC39.99■■■■□ 3.99
RIMBP3Q9UFD9 AL162430.1-201ENST00000480705 870 ntBASIC39.99■■■■□ 3.99
RIMBP3Q9UFD9 MIR6724-1-201ENST00000616420 92 ntBASIC39.99■■■■□ 3.99
RIMBP3Q9UFD9 MIR6724-2-201ENST00000616483 92 ntBASIC39.99■■■■□ 3.99
RIMBP3Q9UFD9 MIR6724-4-201ENST00000617390 92 ntBASIC39.99■■■■□ 3.99
RIMBP3Q9UFD9 MIR6724-3-201ENST00000622482 92 ntBASIC39.99■■■■□ 3.99
RIMBP3Q9UFD9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC39.99■■■■□ 3.99
RIMBP3Q9UFD9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC39.98■■■■□ 3.99
RIMBP3Q9UFD9 MIR6821-201ENST00000617625 74 ntBASIC39.98■■■■□ 3.99
RIMBP3Q9UFD9 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC39.98■■■■□ 3.99
RIMBP3Q9UFD9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC39.98■■■■□ 3.99
RIMBP3Q9UFD9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC39.98■■■■□ 3.99
RIMBP3Q9UFD9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC39.97■■■■□ 3.99
RIMBP3Q9UFD9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC39.97■■■■□ 3.99
RIMBP3Q9UFD9 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC39.96■■■■□ 3.99
RIMBP3Q9UFD9 AC022616.5-201ENST00000518796 181 ntBASIC39.95■■■■□ 3.99
RIMBP3Q9UFD9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC39.95■■■■□ 3.99
RIMBP3Q9UFD9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC39.95■■■■□ 3.99
RIMBP3Q9UFD9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC39.95■■■■□ 3.99
RIMBP3Q9UFD9 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC39.95■■■■□ 3.99
RIMBP3Q9UFD9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC39.94■■■■□ 3.99
RIMBP3Q9UFD9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC39.94■■■■□ 3.99
RIMBP3Q9UFD9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC39.94■■■■□ 3.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms