Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.03■■□□□ 1.6
SHROOM3Q8TF72 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SHROOM3Q8TF72 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
SHROOM3Q8TF72 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
SHROOM3Q8TF72 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
SHROOM3Q8TF72 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.01■■□□□ 1.59
SHROOM3Q8TF72 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SHROOM3Q8TF72 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.01■■□□□ 1.59
SHROOM3Q8TF72 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SHROOM3Q8TF72 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25■■□□□ 1.59
SHROOM3Q8TF72 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
SHROOM3Q8TF72 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25■■□□□ 1.59
SHROOM3Q8TF72 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SHROOM3Q8TF72 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25■■□□□ 1.59
SHROOM3Q8TF72 AC092803.2-201ENST00000564287 1899 ntBASIC25■■□□□ 1.59
SHROOM3Q8TF72 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SHROOM3Q8TF72 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
SHROOM3Q8TF72 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SHROOM3Q8TF72 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SHROOM3Q8TF72 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
SHROOM3Q8TF72 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SHROOM3Q8TF72 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SHROOM3Q8TF72 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SHROOM3Q8TF72 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SHROOM3Q8TF72 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SHROOM3Q8TF72 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
SHROOM3Q8TF72 ERN1-208ENST00000606895 2068 ntBASIC24.97■■□□□ 1.59
SHROOM3Q8TF72 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SHROOM3Q8TF72 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.97■■□□□ 1.59
SHROOM3Q8TF72 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.97■■□□□ 1.59
SHROOM3Q8TF72 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.96■■□□□ 1.59
SHROOM3Q8TF72 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SHROOM3Q8TF72 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SHROOM3Q8TF72 AC012354.3-201ENST00000623734 483 ntBASIC24.95■■□□□ 1.58
SHROOM3Q8TF72 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.95■■□□□ 1.58
SHROOM3Q8TF72 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SHROOM3Q8TF72 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SHROOM3Q8TF72 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SHROOM3Q8TF72 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.94■■□□□ 1.58
SHROOM3Q8TF72 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SHROOM3Q8TF72 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SHROOM3Q8TF72 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SHROOM3Q8TF72 AC093536.1-201ENST00000569153 554 ntBASIC24.94■■□□□ 1.58
SHROOM3Q8TF72 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SHROOM3Q8TF72 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.94■■□□□ 1.58
SHROOM3Q8TF72 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SHROOM3Q8TF72 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.93■■□□□ 1.58
SHROOM3Q8TF72 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SHROOM3Q8TF72 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
SHROOM3Q8TF72 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.93■■□□□ 1.58
SHROOM3Q8TF72 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
SHROOM3Q8TF72 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.92■■□□□ 1.58
SHROOM3Q8TF72 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SHROOM3Q8TF72 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
SHROOM3Q8TF72 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
SHROOM3Q8TF72 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SHROOM3Q8TF72 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SHROOM3Q8TF72 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.91■■□□□ 1.58
SHROOM3Q8TF72 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.91■■□□□ 1.58
SHROOM3Q8TF72 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.9■■□□□ 1.58
SHROOM3Q8TF72 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.9■■□□□ 1.58
SHROOM3Q8TF72 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
SHROOM3Q8TF72 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.89■■□□□ 1.58
SHROOM3Q8TF72 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.89■■□□□ 1.58
SHROOM3Q8TF72 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
SHROOM3Q8TF72 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.89■■□□□ 1.57
SHROOM3Q8TF72 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
SHROOM3Q8TF72 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SHROOM3Q8TF72 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.88■■□□□ 1.57
SHROOM3Q8TF72 AC091060.1-201ENST00000623524 1766 ntBASIC24.88■■□□□ 1.57
SHROOM3Q8TF72 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.88■■□□□ 1.57
SHROOM3Q8TF72 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
SHROOM3Q8TF72 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SHROOM3Q8TF72 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SHROOM3Q8TF72 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
SHROOM3Q8TF72 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SHROOM3Q8TF72 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
SHROOM3Q8TF72 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.87■■□□□ 1.57
SHROOM3Q8TF72 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SHROOM3Q8TF72 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
SHROOM3Q8TF72 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SHROOM3Q8TF72 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
SHROOM3Q8TF72 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SHROOM3Q8TF72 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.86■■□□□ 1.57
SHROOM3Q8TF72 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SHROOM3Q8TF72 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SHROOM3Q8TF72 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
SHROOM3Q8TF72 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.85■■□□□ 1.57
SHROOM3Q8TF72 NTF6A-201ENST00000591175 560 ntBASIC24.85■■□□□ 1.57
SHROOM3Q8TF72 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
SHROOM3Q8TF72 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SHROOM3Q8TF72 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
SHROOM3Q8TF72 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SHROOM3Q8TF72 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
SHROOM3Q8TF72 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SHROOM3Q8TF72 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
SHROOM3Q8TF72 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SHROOM3Q8TF72 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SHROOM3Q8TF72 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SHROOM3Q8TF72 SMPD5-203ENST00000639008 1464 ntBASIC24.83■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms