Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC30Q5VVM6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC31.27■■■□□ 2.6
CCDC30Q5VVM6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.27■■■□□ 2.6
CCDC30Q5VVM6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
CCDC30Q5VVM6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.6
CCDC30Q5VVM6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC31.26■■■□□ 2.59
CCDC30Q5VVM6 ATP5G2P3-201ENST00000429083 425 ntBASIC31.26■■■□□ 2.59
CCDC30Q5VVM6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.26■■■□□ 2.59
CCDC30Q5VVM6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
CCDC30Q5VVM6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CCDC30Q5VVM6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC31.26■■■□□ 2.59
CCDC30Q5VVM6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC30Q5VVM6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC30Q5VVM6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC31.25■■■□□ 2.59
CCDC30Q5VVM6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.25■■■□□ 2.59
CCDC30Q5VVM6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.25■■■□□ 2.59
CCDC30Q5VVM6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC30Q5VVM6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC31.24■■■□□ 2.59
CCDC30Q5VVM6 TSPY13P-201ENST00000338964 914 ntBASIC31.24■■■□□ 2.59
CCDC30Q5VVM6 AL033527.3-201ENST00000566366 1196 ntBASIC31.24■■■□□ 2.59
CCDC30Q5VVM6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
CCDC30Q5VVM6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC30Q5VVM6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC30Q5VVM6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
CCDC30Q5VVM6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC31.23■■■□□ 2.59
CCDC30Q5VVM6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC30Q5VVM6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC30Q5VVM6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC30Q5VVM6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
CCDC30Q5VVM6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC30Q5VVM6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
CCDC30Q5VVM6 SPCS2P3-201ENST00000500401 656 ntBASIC31.22■■■□□ 2.59
CCDC30Q5VVM6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
CCDC30Q5VVM6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC30Q5VVM6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC30Q5VVM6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC30Q5VVM6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC30Q5VVM6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC30Q5VVM6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC31.21■■■□□ 2.59
CCDC30Q5VVM6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC31.21■■■□□ 2.59
CCDC30Q5VVM6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
CCDC30Q5VVM6 DUX4L9-201ENST00000449051 1259 ntBASIC31.2■■■□□ 2.59
CCDC30Q5VVM6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
CCDC30Q5VVM6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC30Q5VVM6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC30Q5VVM6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC30Q5VVM6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC30Q5VVM6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.18■■■□□ 2.58
CCDC30Q5VVM6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC30Q5VVM6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC30Q5VVM6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.18■■■□□ 2.58
CCDC30Q5VVM6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC30Q5VVM6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.17■■■□□ 2.58
CCDC30Q5VVM6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC30Q5VVM6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC30Q5VVM6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC30Q5VVM6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC30Q5VVM6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC30Q5VVM6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC31.16■■■□□ 2.58
CCDC30Q5VVM6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC30Q5VVM6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC30Q5VVM6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC30Q5VVM6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC30Q5VVM6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
CCDC30Q5VVM6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC31.15■■■□□ 2.58
CCDC30Q5VVM6 DUX4L18-201ENST00000553347 1267 ntBASIC31.15■■■□□ 2.58
CCDC30Q5VVM6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC30Q5VVM6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC30Q5VVM6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC30Q5VVM6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC30Q5VVM6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CCDC30Q5VVM6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CCDC30Q5VVM6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.14■■■□□ 2.58
CCDC30Q5VVM6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
CCDC30Q5VVM6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.14■■■□□ 2.58
CCDC30Q5VVM6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC31.14■■■□□ 2.57
CCDC30Q5VVM6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC31.14■■■□□ 2.57
CCDC30Q5VVM6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC31.13■■■□□ 2.57
CCDC30Q5VVM6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CCDC30Q5VVM6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CCDC30Q5VVM6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.13■■■□□ 2.57
CCDC30Q5VVM6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CCDC30Q5VVM6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
CCDC30Q5VVM6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC30Q5VVM6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC30Q5VVM6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC31.12■■■□□ 2.57
CCDC30Q5VVM6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC30Q5VVM6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC30Q5VVM6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC30Q5VVM6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.12■■■□□ 2.57
CCDC30Q5VVM6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC31.12■■■□□ 2.57
CCDC30Q5VVM6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC30Q5VVM6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC30Q5VVM6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC30Q5VVM6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC31.11■■■□□ 2.57
CCDC30Q5VVM6 AC018755.3-202ENST00000596210 929 ntBASIC31.11■■■□□ 2.57
CCDC30Q5VVM6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CCDC30Q5VVM6 MIR6765-201ENST00000614092 87 ntBASIC31.1■■■□□ 2.57
CCDC30Q5VVM6 AL121749.1-202ENST00000609313 2153 ntBASIC31.09■■■□□ 2.57
CCDC30Q5VVM6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms