Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
KCNQ4P56696 Z92544.1-202ENST00000571933 1220 ntBASIC31.72■■■□□ 2.67
KCNQ4P56696 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
KCNQ4P56696 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
KCNQ4P56696 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
KCNQ4P56696 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.71■■■□□ 2.67
KCNQ4P56696 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
KCNQ4P56696 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
KCNQ4P56696 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
KCNQ4P56696 AP002414.2-202ENST00000590929 1450 ntBASIC31.7■■■□□ 2.66
KCNQ4P56696 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
KCNQ4P56696 UNC93B8-201ENST00000511903 705 ntBASIC31.69■■■□□ 2.66
KCNQ4P56696 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC31.68■■■□□ 2.66
KCNQ4P56696 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC31.68■■■□□ 2.66
KCNQ4P56696 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC31.68■■■□□ 2.66
KCNQ4P56696 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.68■■■□□ 2.66
KCNQ4P56696 LONRF2P2-201ENST00000439212 571 ntBASIC31.67■■■□□ 2.66
KCNQ4P56696 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
KCNQ4P56696 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
KCNQ4P56696 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.66■■■□□ 2.66
KCNQ4P56696 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
KCNQ4P56696 MIR638-201ENST00000385237 100 ntBASIC31.66■■■□□ 2.66
KCNQ4P56696 MIR4787-201ENST00000607364 84 ntBASIC31.66■■■□□ 2.66
KCNQ4P56696 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
KCNQ4P56696 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
KCNQ4P56696 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
KCNQ4P56696 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.64■■■□□ 2.66
KCNQ4P56696 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
KCNQ4P56696 RPS2P7-201ENST00000447334 885 ntBASIC31.64■■■□□ 2.66
KCNQ4P56696 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC31.64■■■□□ 2.66
KCNQ4P56696 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
KCNQ4P56696 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
KCNQ4P56696 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
KCNQ4P56696 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
KCNQ4P56696 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
KCNQ4P56696 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
KCNQ4P56696 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC31.62■■■□□ 2.65
KCNQ4P56696 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC31.62■■■□□ 2.65
KCNQ4P56696 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
KCNQ4P56696 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
KCNQ4P56696 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
KCNQ4P56696 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC31.61■■■□□ 2.65
KCNQ4P56696 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
KCNQ4P56696 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
KCNQ4P56696 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.6■■■□□ 2.65
KCNQ4P56696 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
KCNQ4P56696 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC31.6■■■□□ 2.65
KCNQ4P56696 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
KCNQ4P56696 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
KCNQ4P56696 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
KCNQ4P56696 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC31.59■■■□□ 2.65
KCNQ4P56696 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC31.59■■■□□ 2.65
KCNQ4P56696 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC31.59■■■□□ 2.65
KCNQ4P56696 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC31.59■■■□□ 2.65
KCNQ4P56696 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
KCNQ4P56696 KRT125P-201ENST00000546827 989 ntBASIC31.58■■■□□ 2.65
KCNQ4P56696 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
KCNQ4P56696 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC31.58■■■□□ 2.65
KCNQ4P56696 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
KCNQ4P56696 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
KCNQ4P56696 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.57■■■□□ 2.65
KCNQ4P56696 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.57■■■□□ 2.64
KCNQ4P56696 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
KCNQ4P56696 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC31.56■■■□□ 2.64
KCNQ4P56696 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC31.56■■■□□ 2.64
KCNQ4P56696 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
KCNQ4P56696 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.56■■■□□ 2.64
KCNQ4P56696 KRT16P3-201ENST00000439127 1283 ntBASIC31.55■■■□□ 2.64
KCNQ4P56696 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
KCNQ4P56696 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC31.55■■■□□ 2.64
KCNQ4P56696 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
KCNQ4P56696 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
KCNQ4P56696 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
KCNQ4P56696 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
KCNQ4P56696 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC31.54■■■□□ 2.64
KCNQ4P56696 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
KCNQ4P56696 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
KCNQ4P56696 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
KCNQ4P56696 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC31.53■■■□□ 2.64
KCNQ4P56696 RALB-208ENST00000631312 311 ntTSL 5 BASIC31.53■■■□□ 2.64
KCNQ4P56696 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
KCNQ4P56696 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
KCNQ4P56696 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
KCNQ4P56696 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
KCNQ4P56696 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC31.52■■■□□ 2.64
KCNQ4P56696 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
KCNQ4P56696 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
KCNQ4P56696 WHAMMP3-201ENST00000611636 1609 ntBASIC31.52■■■□□ 2.64
KCNQ4P56696 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.51■■■□□ 2.63
KCNQ4P56696 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
KCNQ4P56696 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
KCNQ4P56696 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
KCNQ4P56696 BX664725.1-201ENST00000438252 379 ntBASIC31.51■■■□□ 2.63
KCNQ4P56696 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC31.51■■■□□ 2.63
KCNQ4P56696 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
KCNQ4P56696 TSPY9P-201ENST00000440215 945 ntBASIC31.5■■■□□ 2.63
KCNQ4P56696 TSPY11P-201ENST00000442607 1045 ntBASIC31.5■■■□□ 2.63
KCNQ4P56696 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC31.5■■■□□ 2.63
KCNQ4P56696 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC31.5■■■□□ 2.63
KCNQ4P56696 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC31.5■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms