Protein–RNA interactions for Protein: P20749

BCL3, B-cell lymphoma 3 protein, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3P20749 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BCL3P20749 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BCL3P20749 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BCL3P20749 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BCL3P20749 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BCL3P20749 ERN1-208ENST00000606895 2068 ntBASIC20.68■□□□□ 0.9
BCL3P20749 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
BCL3P20749 AL359504.2-201ENST00000605506 1601 ntBASIC20.67■□□□□ 0.9
BCL3P20749 MIR7108-201ENST00000614319 87 ntBASIC20.67■□□□□ 0.9
BCL3P20749 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.67■□□□□ 0.9
BCL3P20749 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
BCL3P20749 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
BCL3P20749 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.67■□□□□ 0.9
BCL3P20749 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BCL3P20749 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCL3P20749 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
BCL3P20749 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
BCL3P20749 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCL3P20749 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BCL3P20749 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCL3P20749 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCL3P20749 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.66■□□□□ 0.9
BCL3P20749 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCL3P20749 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCL3P20749 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCL3P20749 AC020928.2-201ENST00000588717 2197 ntBASIC20.65■□□□□ 0.9
BCL3P20749 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCL3P20749 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.65■□□□□ 0.9
BCL3P20749 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BCL3P20749 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BCL3P20749 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.64■□□□□ 0.89
BCL3P20749 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
BCL3P20749 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BCL3P20749 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.64■□□□□ 0.89
BCL3P20749 AC126177.7-201ENST00000547904 679 ntBASIC20.64■□□□□ 0.89
BCL3P20749 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
BCL3P20749 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BCL3P20749 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BCL3P20749 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BCL3P20749 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.63■□□□□ 0.89
BCL3P20749 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.63■□□□□ 0.89
BCL3P20749 AC010501.1-201ENST00000606270 1962 ntBASIC20.63■□□□□ 0.89
BCL3P20749 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BCL3P20749 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BCL3P20749 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
BCL3P20749 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BCL3P20749 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.62■□□□□ 0.89
BCL3P20749 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.62■□□□□ 0.89
BCL3P20749 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.62■□□□□ 0.89
BCL3P20749 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
BCL3P20749 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BCL3P20749 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
BCL3P20749 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BCL3P20749 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
BCL3P20749 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
BCL3P20749 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.61■□□□□ 0.89
BCL3P20749 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BCL3P20749 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BCL3P20749 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.6■□□□□ 0.89
BCL3P20749 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BCL3P20749 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BCL3P20749 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCL3P20749 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BCL3P20749 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCL3P20749 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCL3P20749 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCL3P20749 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BCL3P20749 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCL3P20749 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BCL3P20749 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
BCL3P20749 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BCL3P20749 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BCL3P20749 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.58■□□□□ 0.89
BCL3P20749 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
BCL3P20749 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BCL3P20749 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
BCL3P20749 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BCL3P20749 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BCL3P20749 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BCL3P20749 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
BCL3P20749 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BCL3P20749 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.56■□□□□ 0.88
BCL3P20749 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BCL3P20749 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BCL3P20749 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BCL3P20749 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BCL3P20749 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
BCL3P20749 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
BCL3P20749 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
BCL3P20749 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.55■□□□□ 0.88
BCL3P20749 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BCL3P20749 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.55■□□□□ 0.88
BCL3P20749 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BCL3P20749 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.55■□□□□ 0.88
BCL3P20749 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BCL3P20749 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
BCL3P20749 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
BCL3P20749 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BCL3P20749 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.54■□□□□ 0.88
BCL3P20749 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms