Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
COL11A2P13942 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
COL11A2P13942 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
COL11A2P13942 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
COL11A2P13942 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
COL11A2P13942 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
COL11A2P13942 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
COL11A2P13942 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC30.53■■■□□ 2.48
COL11A2P13942 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
COL11A2P13942 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC30.52■■■□□ 2.48
COL11A2P13942 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.52■■■□□ 2.48
COL11A2P13942 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.48
COL11A2P13942 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.51■■■□□ 2.47
COL11A2P13942 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC30.51■■■□□ 2.47
COL11A2P13942 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.47
COL11A2P13942 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
COL11A2P13942 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC30.5■■■□□ 2.47
COL11A2P13942 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
COL11A2P13942 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
COL11A2P13942 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
COL11A2P13942 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.5■■■□□ 2.47
COL11A2P13942 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
COL11A2P13942 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
COL11A2P13942 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC30.5■■■□□ 2.47
COL11A2P13942 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
COL11A2P13942 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC30.49■■■□□ 2.47
COL11A2P13942 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
COL11A2P13942 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
COL11A2P13942 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
COL11A2P13942 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
COL11A2P13942 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC30.48■■■□□ 2.47
COL11A2P13942 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC30.48■■■□□ 2.47
COL11A2P13942 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC30.48■■■□□ 2.47
COL11A2P13942 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
COL11A2P13942 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
COL11A2P13942 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
COL11A2P13942 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
COL11A2P13942 RPS2P7-201ENST00000447334 885 ntBASIC30.47■■■□□ 2.47
COL11A2P13942 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC30.47■■■□□ 2.47
COL11A2P13942 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
COL11A2P13942 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
COL11A2P13942 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
COL11A2P13942 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC30.47■■■□□ 2.47
COL11A2P13942 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
COL11A2P13942 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
COL11A2P13942 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
COL11A2P13942 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
COL11A2P13942 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
COL11A2P13942 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.46■■■□□ 2.47
COL11A2P13942 UNC93B8-201ENST00000511903 705 ntBASIC30.45■■■□□ 2.47
COL11A2P13942 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC30.44■■■□□ 2.46
COL11A2P13942 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
COL11A2P13942 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
COL11A2P13942 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
COL11A2P13942 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
COL11A2P13942 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
COL11A2P13942 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
COL11A2P13942 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.43■■■□□ 2.46
COL11A2P13942 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
COL11A2P13942 MIR935-201ENST00000401179 91 ntBASIC30.42■■■□□ 2.46
COL11A2P13942 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.42■■■□□ 2.46
COL11A2P13942 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.42■■■□□ 2.46
COL11A2P13942 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC30.42■■■□□ 2.46
COL11A2P13942 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
COL11A2P13942 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
COL11A2P13942 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC30.41■■■□□ 2.46
COL11A2P13942 KRT16P3-201ENST00000439127 1283 ntBASIC30.41■■■□□ 2.46
COL11A2P13942 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC30.41■■■□□ 2.46
COL11A2P13942 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
COL11A2P13942 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
COL11A2P13942 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC30.4■■■□□ 2.46
COL11A2P13942 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
COL11A2P13942 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC30.39■■■□□ 2.46
COL11A2P13942 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
COL11A2P13942 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC30.39■■■□□ 2.46
COL11A2P13942 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.39■■■□□ 2.46
COL11A2P13942 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.39■■■□□ 2.46
COL11A2P13942 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
COL11A2P13942 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
COL11A2P13942 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC30.38■■■□□ 2.45
COL11A2P13942 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
COL11A2P13942 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
COL11A2P13942 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC30.38■■■□□ 2.45
COL11A2P13942 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
COL11A2P13942 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.37■■■□□ 2.45
COL11A2P13942 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
COL11A2P13942 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC30.37■■■□□ 2.45
COL11A2P13942 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
COL11A2P13942 BX664725.1-201ENST00000438252 379 ntBASIC30.36■■■□□ 2.45
COL11A2P13942 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC30.36■■■□□ 2.45
COL11A2P13942 MIR4787-201ENST00000607364 84 ntBASIC30.36■■■□□ 2.45
COL11A2P13942 AC008406.3-201ENST00000620001 1374 ntBASIC30.36■■■□□ 2.45
COL11A2P13942 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
COL11A2P13942 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC30.36■■■□□ 2.45
COL11A2P13942 LONRF2P2-201ENST00000439212 571 ntBASIC30.36■■■□□ 2.45
COL11A2P13942 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
COL11A2P13942 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
COL11A2P13942 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC30.35■■■□□ 2.45
COL11A2P13942 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
COL11A2P13942 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms