Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.28■■■□□ 2.6
ABCC4O15439 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ABCC4O15439 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
ABCC4O15439 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ABCC4O15439 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ABCC4O15439 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ABCC4O15439 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.27■■■□□ 2.6
ABCC4O15439 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.6
ABCC4O15439 RARRES2P1-201ENST00000474487 481 ntBASIC31.26■■■□□ 2.6
ABCC4O15439 AC129492.7-201ENST00000622992 756 ntBASIC31.25■■■□□ 2.59
ABCC4O15439 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC31.25■■■□□ 2.59
ABCC4O15439 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC31.25■■■□□ 2.59
ABCC4O15439 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
ABCC4O15439 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
ABCC4O15439 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
ABCC4O15439 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
ABCC4O15439 AC009831.1-201ENST00000580420 1582 ntBASIC31.24■■■□□ 2.59
ABCC4O15439 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
ABCC4O15439 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.24■■■□□ 2.59
ABCC4O15439 AL592293.1-201ENST00000502889 1188 ntBASIC31.24■■■□□ 2.59
ABCC4O15439 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.23■■■□□ 2.59
ABCC4O15439 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.23■■■□□ 2.59
ABCC4O15439 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
ABCC4O15439 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
ABCC4O15439 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
ABCC4O15439 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
ABCC4O15439 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
ABCC4O15439 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ABCC4O15439 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
ABCC4O15439 AL359504.2-201ENST00000605506 1601 ntBASIC31.22■■■□□ 2.59
ABCC4O15439 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ABCC4O15439 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC31.22■■■□□ 2.59
ABCC4O15439 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
ABCC4O15439 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ABCC4O15439 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ABCC4O15439 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ABCC4O15439 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ABCC4O15439 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC31.21■■■□□ 2.59
ABCC4O15439 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
ABCC4O15439 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC31.2■■■□□ 2.59
ABCC4O15439 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
ABCC4O15439 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
ABCC4O15439 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
ABCC4O15439 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
ABCC4O15439 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
ABCC4O15439 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ABCC4O15439 AC133552.2-201ENST00000619106 1032 ntBASIC31.19■■■□□ 2.58
ABCC4O15439 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
ABCC4O15439 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ABCC4O15439 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC31.18■■■□□ 2.58
ABCC4O15439 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ABCC4O15439 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ABCC4O15439 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
ABCC4O15439 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
ABCC4O15439 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC31.18■■■□□ 2.58
ABCC4O15439 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
ABCC4O15439 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
ABCC4O15439 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
ABCC4O15439 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC31.17■■■□□ 2.58
ABCC4O15439 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
ABCC4O15439 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
ABCC4O15439 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.17■■■□□ 2.58
ABCC4O15439 SMPD5-203ENST00000639008 1464 ntBASIC31.17■■■□□ 2.58
ABCC4O15439 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
ABCC4O15439 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC31.16■■■□□ 2.58
ABCC4O15439 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC31.16■■■□□ 2.58
ABCC4O15439 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.15■■■□□ 2.58
ABCC4O15439 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
ABCC4O15439 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC31.15■■■□□ 2.58
ABCC4O15439 DUX4L18-201ENST00000553347 1267 ntBASIC31.15■■■□□ 2.58
ABCC4O15439 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.14■■■□□ 2.58
ABCC4O15439 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
ABCC4O15439 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.14■■■□□ 2.58
ABCC4O15439 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC31.14■■■□□ 2.58
ABCC4O15439 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
ABCC4O15439 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC31.14■■■□□ 2.57
ABCC4O15439 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31.13■■■□□ 2.57
ABCC4O15439 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.13■■■□□ 2.57
ABCC4O15439 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
ABCC4O15439 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
ABCC4O15439 AC025884.2-201ENST00000553429 711 ntBASIC31.12■■■□□ 2.57
ABCC4O15439 AC026202.3-201ENST00000600805 1127 ntBASIC31.12■■■□□ 2.57
ABCC4O15439 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
ABCC4O15439 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
ABCC4O15439 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
ABCC4O15439 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31.11■■■□□ 2.57
ABCC4O15439 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31.11■■■□□ 2.57
ABCC4O15439 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ABCC4O15439 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.1■■■□□ 2.57
ABCC4O15439 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
ABCC4O15439 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.09■■■□□ 2.57
ABCC4O15439 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC31.09■■■□□ 2.57
ABCC4O15439 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
ABCC4O15439 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.08■■■□□ 2.57
ABCC4O15439 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.07■■■□□ 2.56
ABCC4O15439 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
ABCC4O15439 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
ABCC4O15439 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
ABCC4O15439 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
ABCC4O15439 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms