Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.5■■■□□ 2.15
LOC285556D6RIA3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.5■■■□□ 2.15
LOC285556D6RIA3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
LOC285556D6RIA3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC28.5■■■□□ 2.15
LOC285556D6RIA3 AC131212.1-201ENST00000613771 668 ntBASIC28.5■■■□□ 2.15
LOC285556D6RIA3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
LOC285556D6RIA3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
LOC285556D6RIA3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
LOC285556D6RIA3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
LOC285556D6RIA3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC28.48■■■□□ 2.15
LOC285556D6RIA3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
LOC285556D6RIA3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
LOC285556D6RIA3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
LOC285556D6RIA3 AC019171.1-201ENST00000601251 1056 ntBASIC28.47■■■□□ 2.15
LOC285556D6RIA3 AL031848.2-201ENST00000607670 837 ntBASIC28.47■■■□□ 2.15
LOC285556D6RIA3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
LOC285556D6RIA3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
LOC285556D6RIA3 AC087393.1-201ENST00000582896 145 ntBASIC28.46■■■□□ 2.15
LOC285556D6RIA3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC28.46■■■□□ 2.15
LOC285556D6RIA3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
LOC285556D6RIA3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC28.45■■■□□ 2.15
LOC285556D6RIA3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC28.45■■■□□ 2.15
LOC285556D6RIA3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC28.45■■■□□ 2.14
LOC285556D6RIA3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC28.44■■■□□ 2.14
LOC285556D6RIA3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
LOC285556D6RIA3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
LOC285556D6RIA3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
LOC285556D6RIA3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
LOC285556D6RIA3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
LOC285556D6RIA3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
LOC285556D6RIA3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
LOC285556D6RIA3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC28.42■■■□□ 2.14
LOC285556D6RIA3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
LOC285556D6RIA3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
LOC285556D6RIA3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
LOC285556D6RIA3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC28.42■■■□□ 2.14
LOC285556D6RIA3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC28.42■■■□□ 2.14
LOC285556D6RIA3 AC019069.1-201ENST00000610008 1333 ntBASIC28.42■■■□□ 2.14
LOC285556D6RIA3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.41■■■□□ 2.14
LOC285556D6RIA3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
LOC285556D6RIA3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
LOC285556D6RIA3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
LOC285556D6RIA3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
LOC285556D6RIA3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
LOC285556D6RIA3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
LOC285556D6RIA3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
LOC285556D6RIA3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
LOC285556D6RIA3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC28.39■■■□□ 2.14
LOC285556D6RIA3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC28.39■■■□□ 2.14
LOC285556D6RIA3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC28.39■■■□□ 2.13
LOC285556D6RIA3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.13
LOC285556D6RIA3 THA1P-201ENST00000590384 1145 ntBASIC28.39■■■□□ 2.13
LOC285556D6RIA3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.13
LOC285556D6RIA3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
LOC285556D6RIA3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
LOC285556D6RIA3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
LOC285556D6RIA3 RPS2P7-201ENST00000447334 885 ntBASIC28.37■■■□□ 2.13
LOC285556D6RIA3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC28.37■■■□□ 2.13
LOC285556D6RIA3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC28.37■■■□□ 2.13
LOC285556D6RIA3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
LOC285556D6RIA3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
LOC285556D6RIA3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
LOC285556D6RIA3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC28.37■■■□□ 2.13
LOC285556D6RIA3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.37■■■□□ 2.13
LOC285556D6RIA3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC28.37■■■□□ 2.13
LOC285556D6RIA3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
LOC285556D6RIA3 DRD5P2-201ENST00000421395 2012 ntBASIC28.36■■■□□ 2.13
LOC285556D6RIA3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
LOC285556D6RIA3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
LOC285556D6RIA3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
LOC285556D6RIA3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
LOC285556D6RIA3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
LOC285556D6RIA3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC28.35■■■□□ 2.13
LOC285556D6RIA3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
LOC285556D6RIA3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
LOC285556D6RIA3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.35■■■□□ 2.13
LOC285556D6RIA3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
LOC285556D6RIA3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
LOC285556D6RIA3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC28.34■■■□□ 2.13
LOC285556D6RIA3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC28.34■■■□□ 2.13
LOC285556D6RIA3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC28.34■■■□□ 2.13
LOC285556D6RIA3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
LOC285556D6RIA3 Z92544.1-202ENST00000571933 1220 ntBASIC28.33■■■□□ 2.13
LOC285556D6RIA3 AL356441.2-201ENST00000443009 864 ntBASIC28.32■■■□□ 2.12
LOC285556D6RIA3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC28.32■■■□□ 2.12
LOC285556D6RIA3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC28.32■■■□□ 2.12
LOC285556D6RIA3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
LOC285556D6RIA3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
LOC285556D6RIA3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC28.31■■■□□ 2.12
LOC285556D6RIA3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
LOC285556D6RIA3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
LOC285556D6RIA3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC28.3■■■□□ 2.12
LOC285556D6RIA3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
LOC285556D6RIA3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC28.3■■■□□ 2.12
LOC285556D6RIA3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.3■■■□□ 2.12
LOC285556D6RIA3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC28.29■■■□□ 2.12
LOC285556D6RIA3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC28.29■■■□□ 2.12
LOC285556D6RIA3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
LOC285556D6RIA3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
LOC285556D6RIA3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms