Protein–RNA interactions for Protein: A0A1B0GVQ3

LINC00854, Long intergenic non-protein coding RNA 854, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854A0A1B0GVQ3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.29■■□□□ 1
LINC00854A0A1B0GVQ3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
LINC00854A0A1B0GVQ3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.29■■□□□ 1
LINC00854A0A1B0GVQ3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.28■■□□□ 1
LINC00854A0A1B0GVQ3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.28■■□□□ 1
LINC00854A0A1B0GVQ3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
LINC00854A0A1B0GVQ3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LINC00854A0A1B0GVQ3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
LINC00854A0A1B0GVQ3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.28■■□□□ 1
LINC00854A0A1B0GVQ3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LINC00854A0A1B0GVQ3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
LINC00854A0A1B0GVQ3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LINC00854A0A1B0GVQ3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LINC00854A0A1B0GVQ3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.27■■□□□ 1
LINC00854A0A1B0GVQ3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
LINC00854A0A1B0GVQ3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
LINC00854A0A1B0GVQ3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LINC00854A0A1B0GVQ3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.26■□□□□ 0.99
LINC00854A0A1B0GVQ3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LINC00854A0A1B0GVQ3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LINC00854A0A1B0GVQ3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
LINC00854A0A1B0GVQ3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LINC00854A0A1B0GVQ3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LINC00854A0A1B0GVQ3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LINC00854A0A1B0GVQ3 AC138932.3-201ENST00000567634 1902 ntBASIC21.25■□□□□ 0.99
LINC00854A0A1B0GVQ3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LINC00854A0A1B0GVQ3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
LINC00854A0A1B0GVQ3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
LINC00854A0A1B0GVQ3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LINC00854A0A1B0GVQ3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LINC00854A0A1B0GVQ3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LINC00854A0A1B0GVQ3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LINC00854A0A1B0GVQ3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.23■□□□□ 0.99
LINC00854A0A1B0GVQ3 AC068473.5-201ENST00000616428 2072 ntBASIC21.23■□□□□ 0.99
LINC00854A0A1B0GVQ3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LINC00854A0A1B0GVQ3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LINC00854A0A1B0GVQ3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
LINC00854A0A1B0GVQ3 PKD1P6-201ENST00000343738 4769 ntBASIC21.22■□□□□ 0.99
LINC00854A0A1B0GVQ3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LINC00854A0A1B0GVQ3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC21.22■□□□□ 0.99
LINC00854A0A1B0GVQ3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.22■□□□□ 0.99
LINC00854A0A1B0GVQ3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LINC00854A0A1B0GVQ3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.22■□□□□ 0.99
LINC00854A0A1B0GVQ3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LINC00854A0A1B0GVQ3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LINC00854A0A1B0GVQ3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LINC00854A0A1B0GVQ3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LINC00854A0A1B0GVQ3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00854A0A1B0GVQ3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00854A0A1B0GVQ3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
LINC00854A0A1B0GVQ3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00854A0A1B0GVQ3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00854A0A1B0GVQ3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
LINC00854A0A1B0GVQ3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LINC00854A0A1B0GVQ3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LINC00854A0A1B0GVQ3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
LINC00854A0A1B0GVQ3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LINC00854A0A1B0GVQ3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LINC00854A0A1B0GVQ3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00854A0A1B0GVQ3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00854A0A1B0GVQ3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00854A0A1B0GVQ3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
LINC00854A0A1B0GVQ3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00854A0A1B0GVQ3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
LINC00854A0A1B0GVQ3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LINC00854A0A1B0GVQ3 AC022211.4-201ENST00000625094 2161 ntBASIC21.19■□□□□ 0.98
LINC00854A0A1B0GVQ3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00854A0A1B0GVQ3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LINC00854A0A1B0GVQ3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LINC00854A0A1B0GVQ3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LINC00854A0A1B0GVQ3 CLDN5-201ENST00000403084 2357 ntBASIC21.18■□□□□ 0.98
LINC00854A0A1B0GVQ3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LINC00854A0A1B0GVQ3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00854A0A1B0GVQ3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
LINC00854A0A1B0GVQ3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00854A0A1B0GVQ3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00854A0A1B0GVQ3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00854A0A1B0GVQ3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
LINC00854A0A1B0GVQ3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.16■□□□□ 0.98
LINC00854A0A1B0GVQ3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00854A0A1B0GVQ3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.16■□□□□ 0.98
LINC00854A0A1B0GVQ3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
LINC00854A0A1B0GVQ3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00854A0A1B0GVQ3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00854A0A1B0GVQ3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00854A0A1B0GVQ3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00854A0A1B0GVQ3 AC079834.2-201ENST00000609776 1949 ntBASIC21.16■□□□□ 0.98
LINC00854A0A1B0GVQ3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00854A0A1B0GVQ3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00854A0A1B0GVQ3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00854A0A1B0GVQ3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.15■□□□□ 0.98
LINC00854A0A1B0GVQ3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.14■□□□□ 0.98
LINC00854A0A1B0GVQ3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.14■□□□□ 0.98
LINC00854A0A1B0GVQ3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LINC00854A0A1B0GVQ3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
LINC00854A0A1B0GVQ3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LINC00854A0A1B0GVQ3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
LINC00854A0A1B0GVQ3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LINC00854A0A1B0GVQ3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LINC00854A0A1B0GVQ3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 635.5 ms