Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
LOC102724428A0A0B4J2F2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC31.65■■■□□ 2.66
LOC102724428A0A0B4J2F2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC31.65■■■□□ 2.66
LOC102724428A0A0B4J2F2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
LOC102724428A0A0B4J2F2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
LOC102724428A0A0B4J2F2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
LOC102724428A0A0B4J2F2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
LOC102724428A0A0B4J2F2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
LOC102724428A0A0B4J2F2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
LOC102724428A0A0B4J2F2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.64■■■□□ 2.66
LOC102724428A0A0B4J2F2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
LOC102724428A0A0B4J2F2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
LOC102724428A0A0B4J2F2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC31.63■■■□□ 2.65
LOC102724428A0A0B4J2F2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC31.63■■■□□ 2.65
LOC102724428A0A0B4J2F2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC31.63■■■□□ 2.65
LOC102724428A0A0B4J2F2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC31.63■■■□□ 2.65
LOC102724428A0A0B4J2F2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
LOC102724428A0A0B4J2F2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.63■■■□□ 2.65
LOC102724428A0A0B4J2F2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
LOC102724428A0A0B4J2F2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
LOC102724428A0A0B4J2F2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.62■■■□□ 2.65
LOC102724428A0A0B4J2F2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC31.62■■■□□ 2.65
LOC102724428A0A0B4J2F2 LONRF2P2-201ENST00000439212 571 ntBASIC31.61■■■□□ 2.65
LOC102724428A0A0B4J2F2 RPS2P7-201ENST00000447334 885 ntBASIC31.61■■■□□ 2.65
LOC102724428A0A0B4J2F2 Z92544.1-202ENST00000571933 1220 ntBASIC31.61■■■□□ 2.65
LOC102724428A0A0B4J2F2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
LOC102724428A0A0B4J2F2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
LOC102724428A0A0B4J2F2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
LOC102724428A0A0B4J2F2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
LOC102724428A0A0B4J2F2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.6■■■□□ 2.65
LOC102724428A0A0B4J2F2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.6■■■□□ 2.65
LOC102724428A0A0B4J2F2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
LOC102724428A0A0B4J2F2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
LOC102724428A0A0B4J2F2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC31.59■■■□□ 2.65
LOC102724428A0A0B4J2F2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
LOC102724428A0A0B4J2F2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.59■■■□□ 2.65
LOC102724428A0A0B4J2F2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
LOC102724428A0A0B4J2F2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
LOC102724428A0A0B4J2F2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
LOC102724428A0A0B4J2F2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC31.58■■■□□ 2.65
LOC102724428A0A0B4J2F2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
LOC102724428A0A0B4J2F2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC31.57■■■□□ 2.64
LOC102724428A0A0B4J2F2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC31.57■■■□□ 2.64
LOC102724428A0A0B4J2F2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
LOC102724428A0A0B4J2F2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
LOC102724428A0A0B4J2F2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC31.56■■■□□ 2.64
LOC102724428A0A0B4J2F2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
LOC102724428A0A0B4J2F2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
LOC102724428A0A0B4J2F2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC31.55■■■□□ 2.64
LOC102724428A0A0B4J2F2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
LOC102724428A0A0B4J2F2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
LOC102724428A0A0B4J2F2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
LOC102724428A0A0B4J2F2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
LOC102724428A0A0B4J2F2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
LOC102724428A0A0B4J2F2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
LOC102724428A0A0B4J2F2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.52■■■□□ 2.64
LOC102724428A0A0B4J2F2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC31.52■■■□□ 2.64
LOC102724428A0A0B4J2F2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.64
LOC102724428A0A0B4J2F2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
LOC102724428A0A0B4J2F2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
LOC102724428A0A0B4J2F2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC31.51■■■□□ 2.63
LOC102724428A0A0B4J2F2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.5■■■□□ 2.63
LOC102724428A0A0B4J2F2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC31.5■■■□□ 2.63
LOC102724428A0A0B4J2F2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
LOC102724428A0A0B4J2F2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
LOC102724428A0A0B4J2F2 GRAMD4P7-201ENST00000578182 1232 ntBASIC31.49■■■□□ 2.63
LOC102724428A0A0B4J2F2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
LOC102724428A0A0B4J2F2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
LOC102724428A0A0B4J2F2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
LOC102724428A0A0B4J2F2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
LOC102724428A0A0B4J2F2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
LOC102724428A0A0B4J2F2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
LOC102724428A0A0B4J2F2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC31.48■■■□□ 2.63
LOC102724428A0A0B4J2F2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC31.48■■■□□ 2.63
LOC102724428A0A0B4J2F2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.47■■■□□ 2.63
LOC102724428A0A0B4J2F2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.47■■■□□ 2.63
LOC102724428A0A0B4J2F2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
LOC102724428A0A0B4J2F2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
LOC102724428A0A0B4J2F2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.47■■■□□ 2.63
LOC102724428A0A0B4J2F2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC31.47■■■□□ 2.63
LOC102724428A0A0B4J2F2 AC008406.3-201ENST00000620001 1374 ntBASIC31.46■■■□□ 2.63
LOC102724428A0A0B4J2F2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
LOC102724428A0A0B4J2F2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.46■■■□□ 2.63
LOC102724428A0A0B4J2F2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
LOC102724428A0A0B4J2F2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC31.45■■■□□ 2.63
LOC102724428A0A0B4J2F2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.63
LOC102724428A0A0B4J2F2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.63
LOC102724428A0A0B4J2F2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.63
LOC102724428A0A0B4J2F2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
LOC102724428A0A0B4J2F2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC31.44■■■□□ 2.62
LOC102724428A0A0B4J2F2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
LOC102724428A0A0B4J2F2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.44■■■□□ 2.62
LOC102724428A0A0B4J2F2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
LOC102724428A0A0B4J2F2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC31.43■■■□□ 2.62
LOC102724428A0A0B4J2F2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC31.43■■■□□ 2.62
LOC102724428A0A0B4J2F2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.42■■■□□ 2.62
LOC102724428A0A0B4J2F2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
LOC102724428A0A0B4J2F2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC31.42■■■□□ 2.62
LOC102724428A0A0B4J2F2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
LOC102724428A0A0B4J2F2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC31.42■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms