Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.421e-6■□□□□ 8.9
SRSF1Q07955 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.411e-6■□□□□ 8.9
SRSF1Q07955 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.6■□□□□ 0.411e-6■□□□□ 8.9
SRSF1Q07955 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.351e-6■□□□□ 8.9
SRSF1Q07955 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.341e-6■□□□□ 8.9
SRSF1Q07955 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.341e-6■□□□□ 8.9
SRSF1Q07955 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.311e-6■□□□□ 8.9
SRSF1Q07955 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.62□□□□□ -0.231e-6■□□□□ 8.9
SRSF1Q07955 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.4□□□□□ -0.261e-6■□□□□ 8.9
SRSF1Q07955 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.07□□□□□ -0.321e-6■□□□□ 8.9
SRSF1Q07955 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.44■□□□□ 0.221e-6■□□□□ 8.9
SRSF1Q07955 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.13□□□□□ -0.311e-6■□□□□ 8.9
SRSF1Q07955 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.6□□□□□ -0.391e-6■□□□□ 8.9
SRSF1Q07955 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.5□□□□□ -0.411e-6■□□□□ 8.9
SRSF1Q07955 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC10.76□□□□□ -0.691e-6■□□□□ 8.9
SRSF1Q07955 ARHGAP4-221ENST00000488269 960 ntTSL 319.5■□□□□ 0.712e-6■□□□□ 8.9
SRSF1Q07955 ARHGAP4-208ENST00000422091 570 ntTSL 418.84■□□□□ 0.612e-6■□□□□ 8.9
SRSF1Q07955 ARHGAP4-214ENST00000461052 1123 ntTSL 317.63■□□□□ 0.412e-6■□□□□ 8.9
SRSF1Q07955 ARHGAP4-220ENST00000470979 593 ntTSL 517.24■□□□□ 0.352e-6■□□□□ 8.9
SRSF1Q07955 ARHGAP4-206ENST00000418750 586 ntTSL 416.85■□□□□ 0.292e-6■□□□□ 8.9
SRSF1Q07955 ARHGAP4-211ENST00000442262 625 ntTSL 416.52■□□□□ 0.242e-6■□□□□ 8.9
SRSF1Q07955 ARHGAP4-224ENST00000494813 1939 ntTSL 516.38■□□□□ 0.212e-6■□□□□ 8.9
SRSF1Q07955 ARHGAP4-213ENST00000460782 496 ntTSL 314.89□□□□□ -0.032e-6■□□□□ 8.9
SRSF1Q07955 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.11□□□□□ -0.152e-6■□□□□ 8.9
SRSF1Q07955 ARHGAP4-222ENST00000494302 2667 ntTSL 513.75□□□□□ -0.212e-6■□□□□ 8.9
SRSF1Q07955 ARHGAP4-219ENST00000470209 2889 ntTSL 512.96□□□□□ -0.342e-6■□□□□ 8.9
SRSF1Q07955 ARHGAP4-207ENST00000420383 2817 ntTSL 212.82□□□□□ -0.362e-6■□□□□ 8.9
SRSF1Q07955 ARHGAP4-205ENST00000404127 3232 ntTSL 512.63□□□□□ -0.392e-6■□□□□ 8.9
SRSF1Q07955 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.572e-6■□□□□ 8.9
SRSF1Q07955 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.62e-6■□□□□ 8.9
SRSF1Q07955 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.662e-6■□□□□ 8.9
SRSF1Q07955 HDAC7-220ENST00000471235 1012 ntTSL 218.02■□□□□ 0.484e-8■□□□□ 8.9
SRSF1Q07955 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.4■□□□□ 0.384e-8■□□□□ 8.9
SRSF1Q07955 GIPR-203ENST00000585889 1414 ntTSL 1 (best)17.03■□□□□ 0.324e-8■□□□□ 8.9
SRSF1Q07955 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.14e-8■□□□□ 8.9
SRSF1Q07955 GIPR-207ENST00000591322 557 ntTSL 415.53■□□□□ 0.084e-8■□□□□ 8.9
SRSF1Q07955 NUMA1-213ENST00000537217 2331 ntAPPRIS ALT2 TSL 1 (best)13.74□□□□□ -0.219e-7■□□□□ 8.9
SRSF1Q07955 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.434e-8■□□□□ 8.9
SRSF1Q07955 HDAC7-226ENST00000547259 569 ntTSL 311.63□□□□□ -0.554e-8■□□□□ 8.9
SRSF1Q07955 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.689e-7■□□□□ 8.9
SRSF1Q07955 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.74e-8■□□□□ 8.9
SRSF1Q07955 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.719e-7■□□□□ 8.9
SRSF1Q07955 NUMA1-212ENST00000536119 1686 ntTSL 210.61□□□□□ -0.719e-7■□□□□ 8.9
SRSF1Q07955 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.739e-7■□□□□ 8.9
SRSF1Q07955 NUMA1-218ENST00000540843 1969 ntTSL 210.15□□□□□ -0.789e-7■□□□□ 8.9
SRSF1Q07955 NUMA1-223ENST00000542977 2766 ntAPPRIS ALT2 TSL 210.02□□□□□ -0.819e-7■□□□□ 8.9
SRSF1Q07955 NUMA1-202ENST00000358965 7227 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.899e-7■□□□□ 8.9
SRSF1Q07955 HDAC7-229ENST00000549883 537 ntTSL 39.22□□□□□ -0.934e-8■□□□□ 8.9
SRSF1Q07955 MFN2-201ENST00000235329 4539 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.954e-8■□□□□ 8.9
SRSF1Q07955 NUMA1-207ENST00000534987 2211 ntTSL 28.09□□□□□ -1.129e-7■□□□□ 8.9
SRSF1Q07955 NUMA1-201ENST00000351960 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.249e-7■□□□□ 8.9
SRSF1Q07955 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.369e-7■□□□□ 8.9
SRSF1Q07955 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.73■■□□□ 1.558e-9■□□□□ 8.9
SRSF1Q07955 TRAP1-207ENST00000571804 781 ntTSL 521.39■■□□□ 1.018e-9■□□□□ 8.9
SRSF1Q07955 TRAP1-215ENST00000576106 555 ntTSL 421.34■■□□□ 1.018e-9■□□□□ 8.9
SRSF1Q07955 TRAP1-211ENST00000574941 558 ntTSL 417.98■□□□□ 0.478e-9■□□□□ 8.9
SRSF1Q07955 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.15■□□□□ 0.348e-9■□□□□ 8.9
SRSF1Q07955 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.068e-9■□□□□ 8.9
SRSF1Q07955 RPRD1B-203ENST00000462548 2436 ntTSL 512.5□□□□□ -0.418e-9■□□□□ 8.9
SRSF1Q07955 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.578e-9■□□□□ 8.9
SRSF1Q07955 RPRD1B-202ENST00000449186 591 ntTSL 410.03□□□□□ -0.88e-9■□□□□ 8.9
SRSF1Q07955 TRAP1-216ENST00000576335 645 ntTSL 59.77□□□□□ -0.858e-9■□□□□ 8.9
SRSF1Q07955 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC9.66□□□□□ -0.868e-9■□□□□ 8.9
SRSF1Q07955 DUSP16-202ENST00000298573 5253 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.98e-9■□□□□ 8.9
SRSF1Q07955 TRAP1-206ENST00000571538 587 ntTSL 48.94□□□□□ -0.988e-9■□□□□ 8.9
SRSF1Q07955 RASGRF2-205ENST00000514946 548 ntTSL 58.76□□□□□ -1.018e-9■□□□□ 8.9
SRSF1Q07955 RPRD1B-201ENST00000373433 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.038e-9■□□□□ 8.9
SRSF1Q07955 RPRD1B-208ENST00000618318 567 ntTSL 46.85□□□□□ -1.318e-9■□□□□ 8.9
SRSF1Q07955 RPRD1B-207ENST00000614670 659 ntTSL 35.47□□□□□ -1.538e-9■□□□□ 8.9
SRSF1Q07955 RPRD1B-209ENST00000622494 469 ntTSL 34.76□□□□□ -1.658e-9■□□□□ 8.9
SRSF1Q07955 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.83□□□□□ -1.88e-9■□□□□ 8.9
SRSF1Q07955 CHD9-204ENST00000561869 720 ntTSL 22.77□□□□□ -1.978e-9■□□□□ 8.9
SRSF1Q07955 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.54□□□□□ -28e-9■□□□□ 8.9
SRSF1Q07955 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.038e-9■□□□□ 8.9
SRSF1Q07955 F7-205ENST00000479674 767 ntTSL 521.77■■□□□ 1.084e-9■□□□□ 8.9
SRSF1Q07955 F7-203ENST00000444337 564 ntTSL 518.8■□□□□ 0.64e-9■□□□□ 8.9
SRSF1Q07955 F7-204ENST00000473085 558 ntTSL 417.43■□□□□ 0.384e-9■□□□□ 8.9
SRSF1Q07955 ABCC3-214ENST00000513745 898 ntTSL 514.5□□□□□ -0.094e-10■□□□□ 8.9
SRSF1Q07955 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.344e-9■□□□□ 8.9
SRSF1Q07955 CDK5RAP3-223ENST00000582114 647 ntTSL 211.35□□□□□ -0.594e-10■□□□□ 8.9
SRSF1Q07955 CDK5RAP3-205ENST00000577802 415 ntTSL 211.28□□□□□ -0.64e-10■□□□□ 8.9
SRSF1Q07955 F7-206ENST00000541084 2873 ntTSL 2 BASIC8.91□□□□□ -0.984e-9■□□□□ 8.9
SRSF1Q07955 F7-202ENST00000375581 3109 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -14e-9■□□□□ 8.9
SRSF1Q07955 RTN4-210ENST00000427710 589 ntTSL 413.89□□□□□ -0.194e-25■□□□□ 8.9
SRSF1Q07955 CNBP-210ENST00000512338 502 ntTSL 414.14□□□□□ -0.155e-8■□□□□ 8.8
SRSF1Q07955 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.195e-8■□□□□ 8.8
SRSF1Q07955 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.335e-8■□□□□ 8.8
SRSF1Q07955 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.51□□□□□ -0.415e-8■□□□□ 8.8
SRSF1Q07955 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC12.42□□□□□ -0.425e-8■□□□□ 8.8
SRSF1Q07955 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.495e-8■□□□□ 8.8
SRSF1Q07955 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.535e-8■□□□□ 8.8
SRSF1Q07955 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC11.76□□□□□ -0.535e-8■□□□□ 8.8
SRSF1Q07955 CNBP-206ENST00000502372 1026 ntTSL 510.97□□□□□ -0.655e-8■□□□□ 8.8
SRSF1Q07955 PLCG1-221ENST00000619272 330 ntTSL 312.75□□□□□ -0.372e-8■□□□□ 8.8
SRSF1Q07955 PLCG1-209ENST00000483175 1084 ntTSL 212.73□□□□□ -0.372e-8■□□□□ 8.8
SRSF1Q07955 PLCG1-208ENST00000477870 1051 ntTSL 212.51□□□□□ -0.412e-8■□□□□ 8.8
SRSF1Q07955 PLCG1-220ENST00000617873 583 ntTSL 311.78□□□□□ -0.522e-8■□□□□ 8.8
SRSF1Q07955 DDRGK1-203ENST00000470203 480 ntTSL 311.71□□□□□ -0.532e-8■□□□□ 8.8
SRSF1Q07955 PLCG1-219ENST00000612731 544 ntTSL 311.59□□□□□ -0.552e-8■□□□□ 8.8
SRSF1Q07955 MIR144-201ENST00000384886 86 ntBASIC2.1□□□□□ -2.078e-11■□□□□ 8.8
Retrieved 100 of 14,836 protein–RNA pairs in 241.8 ms