RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 AEBP2Q6ZN18 517 aaPredicted RBP15.75■□□□□ 0.11
CHD9-204ENST00000561869 CHIC1Q5VXU3 224 aa14.88□□□□□ -0.03
CHD9-204ENST00000561869 SENP3Q9H4L4 574 aaPredicted RBP13.32□□□□□ -0.28
CHD9-204ENST00000561869 PHF23Q9BUL5 403 aaPredicted RBP13.2□□□□□ -0.3
CHD9-204ENST00000561869 FOXD1Q16676 465 aa12.49□□□□□ -0.41
CHD9-204ENST00000561869 PLPPR3Q6T4P5 718 aa11.83□□□□□ -0.52
CHD9-204ENST00000561869 PPP6R1Q9UPN7 881 aa11.71□□□□□ -0.53
CHD9-204ENST00000561869 ADRA2BP18089 450 aa11.64□□□□□ -0.55
CHD9-204ENST00000561869 PIAS4Q8N2W9 510 aaPredicted RBP11.62□□□□□ -0.55
CHD9-204ENST00000561869 MSH5O43196 834 aa11.61□□□□□ -0.55
CHD9-204ENST00000561869 POTEDQ86YR6 584 aa11.42□□□□□ -0.58
CHD9-204ENST00000561869 MAPK8IP2Q13387 824 aaPredicted RBP10.72□□□□□ -0.69
CHD9-204ENST00000561869 DMRT2Q9Y5R5 561 aa10.59□□□□□ -0.71
CHD9-204ENST00000561869 SCAF1Q9H7N4 1312 aaKnown RBP10.53□□□□□ -0.72
CHD9-204ENST00000561869 PPP4R3CPQ6ZMV5 832 aa10.41□□□□□ -0.74
CHD9-204ENST00000561869 HOXD11P31277 338 aaPredicted RBP10.2□□□□□ -0.78
CHD9-204ENST00000561869 CNKSR2Q8WXI2 1034 aa10.18□□□□□ -0.78
CHD9-204ENST00000561869 DCAF8L1A6NGE4 600 aa10.14□□□□□ -0.79
CHD9-204ENST00000561869 RNF216Q9NWF9 866 aaPredicted RBP10.1□□□□□ -0.79
CHD9-204ENST00000561869 CACNB1Q02641 598 aaPredicted RBP9.99□□□□□ -0.81
CHD9-204ENST00000561869 RNF39Q9H2S5 420 aa9.96□□□□□ -0.82
CHD9-204ENST00000561869 NCBP3Q53F19 620 aaKnown RBP9.93□□□□□ -0.82
CHD9-204ENST00000561869 NPM3O75607 178 aaKnown RBP9.88□□□□□ -0.83
CHD9-204ENST00000561869 KCNA4P22459 653 aa9.81□□□□□ -0.84
CHD9-204ENST00000561869 DNAJC5BQ9UF47 199 aa9.79□□□□□ -0.84
CHD9-204ENST00000561869 C1QBPQ07021 282 aaKnown RBP9.76□□□□□ -0.85
CHD9-204ENST00000561869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.69□□□□□ -0.86
CHD9-204ENST00000561869 U3KPZ7 1027 aaPredicted RBP9.54□□□□□ -0.88
CHD9-204ENST00000561869 SLC4A2P04920 1241 aa9.47□□□□□ -0.89
CHD9-204ENST00000561869 SPINK5Q9NQ38 1064 aaPredicted RBP9.42□□□□□ -0.9
CHD9-204ENST00000561869 CAPN15O75808 1086 aa9.34□□□□□ -0.91
CHD9-204ENST00000561869 DSG3P32926 999 aa9.32□□□□□ -0.92
CHD9-204ENST00000561869 SLC4A1APQ9BWU0 796 aaKnown RBP9.28□□□□□ -0.92
CHD9-204ENST00000561869 TRHP20396 242 aaPredicted RBP9.2□□□□□ -0.94
CHD9-204ENST00000561869 ABCB7O75027 752 aa9.17□□□□□ -0.94
CHD9-204ENST00000561869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.15□□□□□ -0.94
CHD9-204ENST00000561869 HNRNPUL2Q1KMD3 747 aaKnown RBP9.15□□□□□ -0.94
CHD9-204ENST00000561869 ZNF219Q9P2Y4 722 aaPredicted RBP9.14□□□□□ -0.95
CHD9-204ENST00000561869 APLP2Q06481 763 aa9.13□□□□□ -0.95
CHD9-204ENST00000561869 SAMD1Q6SPF0 538 aaPredicted RBP9.13□□□□□ -0.95
CHD9-204ENST00000561869 MYCNP04198 464 aaPredicted RBP9.08□□□□□ -0.96
CHD9-204ENST00000561869 ZBTB22O15209 634 aa9.06□□□□□ -0.96
CHD9-204ENST00000561869 FOXD4L1Q9NU39 408 aa9.03□□□□□ -0.96
CHD9-204ENST00000561869 ATF5Q9Y2D1 282 aaPredicted RBP8.98□□□□□ -0.97
CHD9-204ENST00000561869 POLA2Q14181 598 aa8.95□□□□□ -0.98
CHD9-204ENST00000561869 POTEHQ6S545 545 aa8.93□□□□□ -0.98
CHD9-204ENST00000561869 CSRNP3Q8WYN3 585 aa8.89□□□□□ -0.99
CHD9-204ENST00000561869 EHMT2Q96KQ7 1210 aa8.86□□□□□ -0.99
CHD9-204ENST00000561869 RBM42Q9BTD8 480 aaKnown RBP8.81□□□□□ -1
CHD9-204ENST00000561869 ATXN8OSP0DMR3 200 aa8.74□□□□□ -1.01
CHD9-204ENST00000561869 OSCARQ8IYS5 282 aa8.7□□□□□ -1.02
CHD9-204ENST00000561869 ZBTB12Q9Y330 459 aaPredicted RBP8.7□□□□□ -1.02
CHD9-204ENST00000561869 CHRDL2Q6WN34 429 aa8.69□□□□□ -1.02
CHD9-204ENST00000561869 AKT1S1Q96B36 256 aa8.65□□□□□ -1.02
CHD9-204ENST00000561869 REM2Q8IYK8 340 aaPredicted RBP8.6□□□□□ -1.03
CHD9-204ENST00000561869 MKRN4PQ13434 485 aaPredicted RBP8.55□□□□□ -1.04
CHD9-204ENST00000561869 PITPNM1O00562 1244 aa8.52□□□□□ -1.05
CHD9-204ENST00000561869 FBLN2P98095 1184 aa8.5□□□□□ -1.05
CHD9-204ENST00000561869 PIP4P2Q8N4L2 257 aa8.5□□□□□ -1.05
CHD9-204ENST00000561869 SPDYE2BA6NHP3 402 aa8.47□□□□□ -1.05
CHD9-204ENST00000561869 SPDYE6P0CI01 402 aa8.47□□□□□ -1.05
CHD9-204ENST00000561869 SPDYE2Q495Y8 402 aa8.47□□□□□ -1.05
CHD9-204ENST00000561869 FXR2P51116 673 aaKnown RBP eCLIP8.44□□□□□ -1.06
CHD9-204ENST00000561869 SSUH2Q9Y2M2 353 aa8.4□□□□□ -1.06
CHD9-204ENST00000561869 ZNF692Q9BU19 519 aaPredicted RBP8.37□□□□□ -1.07
CHD9-204ENST00000561869 SP7Q8TDD2 431 aaPredicted RBP8.35□□□□□ -1.07
CHD9-204ENST00000561869 SPDYE1Q8NFV5 336 aaPredicted RBP8.32□□□□□ -1.08
CHD9-204ENST00000561869 CLEC11AQ9Y240 323 aa8.32□□□□□ -1.08
CHD9-204ENST00000561869 HAX1O00165 279 aa8.31□□□□□ -1.08
CHD9-204ENST00000561869 EVX2Q03828 476 aa8.3□□□□□ -1.08
CHD9-204ENST00000561869 PRKAR2AP13861 404 aaKnown RBP8.27□□□□□ -1.09
CHD9-204ENST00000561869 PABPN1Q86U42 306 aaKnown RBP eCLIP8.27□□□□□ -1.09
CHD9-204ENST00000561869 CHADLQ6NUI6 762 aa8.22□□□□□ -1.09
CHD9-204ENST00000561869 C19orf67A6NJJ6 358 aa8.17□□□□□ -1.1
CHD9-204ENST00000561869 PRR29P0C7W0 189 aa8.17□□□□□ -1.1
CHD9-204ENST00000561869 SPDYE4A6NLX3 237 aa8.1□□□□□ -1.11
CHD9-204ENST00000561869 FARP1Q9Y4F1 1045 aaPredicted RBP8.06□□□□□ -1.12
CHD9-204ENST00000561869 GABBR2O75899 941 aa8.05□□□□□ -1.12
CHD9-204ENST00000561869 CREBZFQ9NS37 354 aa8.03□□□□□ -1.12
CHD9-204ENST00000561869 PROM2Q8N271 834 aa8.02□□□□□ -1.13
CHD9-204ENST00000561869 CD44P16070 742 aaKnown RBP8.01□□□□□ -1.13
CHD9-204ENST00000561869 FKBP8Q14318 412 aa7.98□□□□□ -1.13
CHD9-204ENST00000561869 STAG3Q9UJ98 1225 aa7.97□□□□□ -1.13
CHD9-204ENST00000561869 POTEIP0CG38 1075 aa7.94□□□□□ -1.14
CHD9-204ENST00000561869 MNX1P50219 401 aaPredicted RBP7.9□□□□□ -1.14
CHD9-204ENST00000561869 ZNF579Q8NAF0 562 aaKnown RBP7.89□□□□□ -1.15
CHD9-204ENST00000561869 ZRANB1Q9UGI0 708 aa7.89□□□□□ -1.15
CHD9-204ENST00000561869 GALR2O43603 387 aaPredicted RBP7.83□□□□□ -1.16
CHD9-204ENST00000561869 LHX8Q68G74 356 aa7.83□□□□□ -1.16
CHD9-204ENST00000561869 PHF12Q96QT6 1004 aa7.83□□□□□ -1.16
CHD9-204ENST00000561869 CLCN6P51797 869 aa7.8□□□□□ -1.16
CHD9-204ENST00000561869 NPM1P06748 294 aaKnown RBP eCLIP7.79□□□□□ -1.16
CHD9-204ENST00000561869 DCBLD2Q96PD2 775 aa7.78□□□□□ -1.16
CHD9-204ENST00000561869 PAK3O75914 559 aaPredicted RBP7.76□□□□□ -1.17
CHD9-204ENST00000561869 PELP1Q8IZL8 1130 aaKnown RBP7.71□□□□□ -1.18
CHD9-204ENST00000561869 MS4A3Q96HJ5 214 aa7.71□□□□□ -1.18
CHD9-204ENST00000561869 TSPYL2Q9H2G4 693 aaPredicted RBP7.71□□□□□ -1.18
CHD9-204ENST00000561869 FBXO3Q9UK99 471 aa7.71□□□□□ -1.18
CHD9-204ENST00000561869 CCDC61Q9Y6R9 512 aa7.69□□□□□ -1.18
CHD9-204ENST00000561869 POTEB2H3BUK9 544 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms