RNA–Protein interactions for RNA: ENST00000576335.5

TRAP1-216, Transcript of TNF receptor associated protein 1, humanhuman

TSL 5

Gene TRAP1, Length 645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-216ENST00000576335 NISCHQ9Y2I1 1504 aa26.4■■□□□ 1.82
TRAP1-216ENST00000576335 CCDC180Q9P1Z9 1646 aa23.35■■□□□ 1.33
TRAP1-216ENST00000576335 ABCC9O60706 1549 aa22.43■■□□□ 1.18
TRAP1-216ENST00000576335 ZCCHC6Q5VYS8 1495 aaKnown RBP22.11■■□□□ 1.13
TRAP1-216ENST00000576335 DCAF1Q9Y4B6 1507 aa21.96■■□□□ 1.11
TRAP1-216ENST00000576335 MYO15BQ96JP2 1530 aa21.92■■□□□ 1.1
TRAP1-216ENST00000576335 NACADO15069 1562 aa21.86■■□□□ 1.09
TRAP1-216ENST00000576335 DCAF8L2P0C7V8 631 aa21.77■■□□□ 1.08
TRAP1-216ENST00000576335 RB1CC1Q8TDY2 1594 aa21.76■■□□□ 1.07
TRAP1-216ENST00000576335 SCRIBQ14160 1630 aa21.23■□□□□ 0.99
TRAP1-216ENST00000576335 UNC13AQ9UPW8 1703 aa21.14■□□□□ 0.97
TRAP1-216ENST00000576335 SHROOM4Q9ULL8 1493 aa21.01■□□□□ 0.95
TRAP1-216ENST00000576335 BICRAQ9NZM4 1560 aa20.99■□□□□ 0.95
TRAP1-216ENST00000576335 PABPN1Q86U42 306 aaKnown RBP eCLIP20.99■□□□□ 0.957e-13■□□□□ 9.2
TRAP1-216ENST00000576335 DNAJC5BQ9UF47 199 aa20.5■□□□□ 0.87
TRAP1-216ENST00000576335 BAZ1AQ9NRL2 1556 aaPredicted RBP20.49■□□□□ 0.87
TRAP1-216ENST00000576335 EIF4G1Q04637 1599 aaKnown RBP20.45■□□□□ 0.86
TRAP1-216ENST00000576335 CECR2Q9BXF3 1484 aa20.43■□□□□ 0.86
TRAP1-216ENST00000576335 SMARCA4P51532 1647 aa20.39■□□□□ 0.86
TRAP1-216ENST00000576335 MROH2BQ7Z745 1585 aa20.3■□□□□ 0.84
TRAP1-216ENST00000576335 RSF1Q96T23 1441 aaPredicted RBP20.26■□□□□ 0.83
TRAP1-216ENST00000576335 PEG3Q9GZU2 1588 aa20.25■□□□□ 0.83
TRAP1-216ENST00000576335 CC2D2AQ9P2K1 1620 aa20.24■□□□□ 0.83
TRAP1-216ENST00000576335 SMARCA2P51531 1590 aa20.24■□□□□ 0.83
TRAP1-216ENST00000576335 ATAD2BQ9ULI0 1458 aa20.17■□□□□ 0.82
TRAP1-216ENST00000576335 NCAPD3P42695 1498 aa20.13■□□□□ 0.81
TRAP1-216ENST00000576335 HMGXB3Q12766 1538 aa20.1■□□□□ 0.81
TRAP1-216ENST00000576335 WIZO95785 1651 aa20.09■□□□□ 0.81
TRAP1-216ENST00000576335 BAZ1BQ9UIG0 1483 aaKnown RBP20.05■□□□□ 0.8
TRAP1-216ENST00000576335 TOP2AP11388 1531 aaKnown RBP20■□□□□ 0.79
TRAP1-216ENST00000576335 SUPT5HO00267 1087 aaKnown RBP19.99■□□□□ 0.79
TRAP1-216ENST00000576335 CCDC88BA6NC98 1476 aa19.7■□□□□ 0.74
TRAP1-216ENST00000576335 LAMC3Q9Y6N6 1575 aa19.55■□□□□ 0.72
TRAP1-216ENST00000576335 CADPSQ9ULU8 1353 aa19.55■□□□□ 0.72
TRAP1-216ENST00000576335 CFTRP13569 1480 aa19.54■□□□□ 0.72
TRAP1-216ENST00000576335 PRDM2Q13029 1718 aa19.42■□□□□ 0.7
TRAP1-216ENST00000576335 PDS5BQ9NTI5 1447 aa19.42■□□□□ 0.7
TRAP1-216ENST00000576335 NESP48681 1621 aa19.4■□□□□ 0.7
TRAP1-216ENST00000576335 ERCC6Q03468 1493 aa19.39■□□□□ 0.69
TRAP1-216ENST00000576335 FANCD2Q9BXW9 1451 aa19.31■□□□□ 0.68
TRAP1-216ENST00000576335 CEP164Q9UPV0 1460 aa19.28■□□□□ 0.68
TRAP1-216ENST00000576335 KIF21AQ7Z4S6 1674 aa19.21■□□□□ 0.67
TRAP1-216ENST00000576335 ABCC8Q09428 1581 aa19.18■□□□□ 0.66
TRAP1-216ENST00000576335 MRC2Q9UBG0 1479 aa19.16■□□□□ 0.66
TRAP1-216ENST00000576335 WRNQ14191 1432 aaPredicted RBP eCLIP19.12■□□□□ 0.652e-6■■□□□ 11.9
TRAP1-216ENST00000576335 CUX2O14529 1486 aa19.1■□□□□ 0.65
TRAP1-216ENST00000576335 DNMBPQ6XZF7 1577 aa19.1■□□□□ 0.65
TRAP1-216ENST00000576335 THOC2Q8NI27 1593 aaKnown RBP19.09■□□□□ 0.65
TRAP1-216ENST00000576335 WDR62O43379 1518 aa19.08■□□□□ 0.64
TRAP1-216ENST00000576335 URB2Q14146 1524 aaKnown RBP19.05■□□□□ 0.64
TRAP1-216ENST00000576335 TOPBP1Q92547 1522 aa19.05■□□□□ 0.64
TRAP1-216ENST00000576335 CUX1P39880 1505 aa19.04■□□□□ 0.64
TRAP1-216ENST00000576335 TOP2BQ02880 1626 aa19.03■□□□□ 0.64
TRAP1-216ENST00000576335 BIVM-ERCC5R4GMW8 1640 aa19.03■□□□□ 0.64
TRAP1-216ENST00000576335 SYNJ1O43426 1573 aa18.99■□□□□ 0.63
TRAP1-216ENST00000576335 TRIM41Q8WV44 630 aa18.94■□□□□ 0.62
TRAP1-216ENST00000576335 CHIC1Q5VXU3 224 aa18.93■□□□□ 0.62
TRAP1-216ENST00000576335 FGD5Q6ZNL6 1462 aa18.92■□□□□ 0.62
TRAP1-216ENST00000576335 POLA1P09884 1462 aaPredicted RBP18.91■□□□□ 0.62
TRAP1-216ENST00000576335 IFT140Q96RY7 1462 aa18.88■□□□□ 0.61
TRAP1-216ENST00000576335 SOGA1O94964 1423 aa18.84■□□□□ 0.61
TRAP1-216ENST00000576335 WDR97A6NE52 1622 aa18.82■□□□□ 0.6
TRAP1-216ENST00000576335 ABCA10Q8WWZ4 1543 aa18.8■□□□□ 0.6
TRAP1-216ENST00000576335 TARBP1Q13395 1621 aaKnown RBP18.79■□□□□ 0.6
TRAP1-216ENST00000576335 RAD54L2Q9Y4B4 1467 aa18.77■□□□□ 0.59
TRAP1-216ENST00000576335 KIF27Q86VH2 1401 aa18.72■□□□□ 0.59
TRAP1-216ENST00000576335 EEA1Q15075 1411 aa18.71■□□□□ 0.59
TRAP1-216ENST00000576335 ABCA5Q8WWZ7 1642 aa18.67■□□□□ 0.58
TRAP1-216ENST00000576335 EIF4G3O43432 1585 aaKnown RBP18.65■□□□□ 0.58
TRAP1-216ENST00000576335 GAPVD1Q14C86 1478 aa18.65■□□□□ 0.58
TRAP1-216ENST00000576335 ZNF608Q9ULD9 1512 aaPredicted RBP18.64■□□□□ 0.57
TRAP1-216ENST00000576335 TDRD9Q8NDG6 1382 aaKnown RBP18.63■□□□□ 0.57
TRAP1-216ENST00000576335 ERICH3Q5RHP9 1530 aa18.61■□□□□ 0.57
TRAP1-216ENST00000576335 GRIN2BQ13224 1484 aa18.61■□□□□ 0.57
TRAP1-216ENST00000576335 AQRO60306 1485 aaKnown RBP eCLIP18.59■□□□□ 0.572e-7■■■■□ 21.4
TRAP1-216ENST00000576335 PBRM1Q86U86 1689 aa18.57■□□□□ 0.56
TRAP1-216ENST00000576335 MAGI1Q96QZ7 1491 aaPredicted RBP18.54■□□□□ 0.56
TRAP1-216ENST00000576335 CUL7Q14999 1698 aa18.54■□□□□ 0.56
TRAP1-216ENST00000576335 RUSC2Q8N2Y8 1516 aa18.52■□□□□ 0.56
TRAP1-216ENST00000576335 IGF1RP08069 1367 aa18.52■□□□□ 0.55
TRAP1-216ENST00000576335 CSRNP3Q8WYN3 585 aa18.5■□□□□ 0.55
TRAP1-216ENST00000576335 DNAJC5Q9H3Z4 198 aa18.5■□□□□ 0.55
TRAP1-216ENST00000576335 SNAPC4Q5SXM2 1469 aa18.48■□□□□ 0.55
TRAP1-216ENST00000576335 FHAD1B1AJZ9 1412 aa18.48■□□□□ 0.55
TRAP1-216ENST00000576335 ADAMTS12P58397 1594 aa18.47■□□□□ 0.55
TRAP1-216ENST00000576335 SYNJ2O15056 1496 aa18.45■□□□□ 0.54
TRAP1-216ENST00000576335 CARMIL1Q5VZK9 1371 aa18.44■□□□□ 0.54
TRAP1-216ENST00000576335 PRXQ9BXM0 1461 aa18.44■□□□□ 0.54
TRAP1-216ENST00000576335 FAM9AQ8IZU1 332 aaPredicted RBP18.42■□□□□ 0.54
TRAP1-216ENST00000576335 KIF21BO75037 1637 aa18.41■□□□□ 0.54
TRAP1-216ENST00000576335 RAPGEF2Q9Y4G8 1499 aa18.41■□□□□ 0.54
TRAP1-216ENST00000576335 FBLN2P98095 1184 aa18.37■□□□□ 0.53
TRAP1-216ENST00000576335 OSCARQ8IYS5 282 aa18.37■□□□□ 0.53
TRAP1-216ENST00000576335 CHMP7Q8WUX9 453 aaPredicted RBP18.37■□□□□ 0.53
TRAP1-216ENST00000576335 GRIN2AQ12879 1464 aa18.35■□□□□ 0.53
TRAP1-216ENST00000576335 GOLGA3Q08378 1498 aa18.34■□□□□ 0.53
TRAP1-216ENST00000576335 CHD1O14646 1710 aa18.29■□□□□ 0.52
TRAP1-216ENST00000576335 NUP160Q12769 1436 aa18.26■□□□□ 0.51
TRAP1-216ENST00000576335 KIAA0586Q9BVV6 1533 aa18.21■□□□□ 0.51
TRAP1-216ENST00000576335 CEP170Q5SW79 1584 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms