RNA–Protein interactions for RNA: ENST00000340077.9

PARD3-201, Transcript of par-3 family cell polarity regulator, humanhuman

TSL 1 (best) BASIC

Gene PARD3, Length 3,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD3-201ENST00000340077 NISCHQ9Y2I1 1504 aa33.85■■■■□ 3.01
PARD3-201ENST00000340077 SHROOM4Q9ULL8 1493 aa31.01■■■□□ 2.55
PARD3-201ENST00000340077 SUPT5HO00267 1087 aaKnown RBP30.69■■■□□ 2.5
PARD3-201ENST00000340077 DCAF8L2P0C7V8 631 aa30.62■■■□□ 2.49
PARD3-201ENST00000340077 PCGF6Q9BYE7 350 aa29.18■■■□□ 2.26
PARD3-201ENST00000340077 EHMT2Q96KQ7 1210 aa29.1■■■□□ 2.25
PARD3-201ENST00000340077 CHIC1Q5VXU3 224 aa29■■■□□ 2.23
PARD3-201ENST00000340077 LOC105371045A0A1W2PR82 267 aa28.84■■■□□ 2.21
PARD3-201ENST00000340077 PPARGC1BQ86YN6 1023 aaKnown RBP28.74■■■□□ 2.19
PARD3-201ENST00000340077 FAM9AQ8IZU1 332 aaPredicted RBP28.67■■■□□ 2.18
PARD3-201ENST00000340077 MYO15BQ96JP2 1530 aa28.62■■■□□ 2.17
PARD3-201ENST00000340077 HRCP23327 699 aa28.55■■■□□ 2.16
PARD3-201ENST00000340077 ZCCHC6Q5VYS8 1495 aaKnown RBP28.46■■■□□ 2.15
PARD3-201ENST00000340077 TRIM41Q8WV44 630 aa28.09■■■□□ 2.09
PARD3-201ENST00000340077 TTBK1Q5TCY1 1321 aaPredicted RBP28.08■■■□□ 2.09
PARD3-201ENST00000340077 TRIM26Q12899 539 aaPredicted RBP27.81■■■□□ 2.04
PARD3-201ENST00000340077 CCDC180Q9P1Z9 1646 aa27.77■■■□□ 2.04
PARD3-201ENST00000340077 SCRIBQ14160 1630 aa27.45■■□□□ 1.99
PARD3-201ENST00000340077 ABCC9O60706 1549 aa27.43■■□□□ 1.98
PARD3-201ENST00000340077 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.36■■□□□ 1.97
PARD3-201ENST00000340077 RANGAP1P46060 587 aaPredicted RBP27.31■■□□□ 1.96
PARD3-201ENST00000340077 DCAF1Q9Y4B6 1507 aa27.31■■□□□ 1.96
PARD3-201ENST00000340077 CCER1Q8TC90 406 aaPredicted RBP27.29■■□□□ 1.96
PARD3-201ENST00000340077 RSF1Q96T23 1441 aaPredicted RBP27.23■■□□□ 1.95
PARD3-201ENST00000340077 ZEB1P37275 1124 aaPredicted RBP27.12■■□□□ 1.93
PARD3-201ENST00000340077 UBTFP17480 764 aaKnown RBP27.06■■□□□ 1.92
PARD3-201ENST00000340077 CECR2Q9BXF3 1484 aa26.98■■□□□ 1.91
PARD3-201ENST00000340077 RB1CC1Q8TDY2 1594 aa26.96■■□□□ 1.91
PARD3-201ENST00000340077 PABPN1Q86U42 306 aaKnown RBP eCLIP26.92■■□□□ 1.9
PARD3-201ENST00000340077 YTHDC1Q96MU7 727 aaKnown RBP26.84■■□□□ 1.89
PARD3-201ENST00000340077 HNRNPUL2Q1KMD3 747 aaKnown RBP26.75■■□□□ 1.87
PARD3-201ENST00000340077 SCAF1Q9H7N4 1312 aaKnown RBP26.72■■□□□ 1.87
PARD3-201ENST00000340077 MROH2BQ7Z745 1585 aa26.64■■□□□ 1.86
PARD3-201ENST00000340077 DIEXFQ68CQ4 756 aaKnown RBP26.6■■□□□ 1.85
PARD3-201ENST00000340077 APLP2Q06481 763 aa26.5■■□□□ 1.83
PARD3-201ENST00000340077 NEUROD1Q13562 356 aa26.47■■□□□ 1.83
PARD3-201ENST00000340077 WIZO95785 1651 aa26.45■■□□□ 1.82
PARD3-201ENST00000340077 GTF3C3Q9Y5Q9 886 aa26.41■■□□□ 1.82
PARD3-201ENST00000340077 CSRNP3Q8WYN3 585 aa26.38■■□□□ 1.81
PARD3-201ENST00000340077 ABCC8Q09428 1581 aa26.36■■□□□ 1.81
PARD3-201ENST00000340077 CENPBP07199 599 aaPredicted RBP26.35■■□□□ 1.81
PARD3-201ENST00000340077 SOGA1O94964 1423 aa26.32■■□□□ 1.8
PARD3-201ENST00000340077 ITGAEP38570 1179 aa26.3■■□□□ 1.8
PARD3-201ENST00000340077 ACIN1Q9UKV3 1341 aaKnown RBP26.29■■□□□ 1.8
PARD3-201ENST00000340077 CCDC88BA6NC98 1476 aa26.28■■□□□ 1.8
PARD3-201ENST00000340077 CEP162Q5TB80 1403 aa26.18■■□□□ 1.78
PARD3-201ENST00000340077 RUSC2Q8N2Y8 1516 aa26.14■■□□□ 1.78
PARD3-201ENST00000340077 NACADO15069 1562 aa26.12■■□□□ 1.77
PARD3-201ENST00000340077 ATP1B4Q9UN42 357 aaPredicted RBP26.09■■□□□ 1.77
PARD3-201ENST00000340077 ZNF316A6NFI3 1004 aaPredicted RBP26.07■■□□□ 1.76
PARD3-201ENST00000340077 MIER1Q8N108 512 aa25.99■■□□□ 1.75
PARD3-201ENST00000340077 PELP1Q8IZL8 1130 aaKnown RBP25.98■■□□□ 1.75
PARD3-201ENST00000340077 BAZ1AQ9NRL2 1556 aaPredicted RBP25.93■■□□□ 1.74
PARD3-201ENST00000340077 TNIKQ9UKE5 1360 aa25.84■■□□□ 1.73
PARD3-201ENST00000340077 WRNQ14191 1432 aaPredicted RBP eCLIP25.79■■□□□ 1.72
PARD3-201ENST00000340077 CLIP1P30622 1438 aa25.75■■□□□ 1.71
PARD3-201ENST00000340077 P3H3Q8IVL6 736 aa25.72■■□□□ 1.71
PARD3-201ENST00000340077 GOLGA3Q08378 1498 aa25.68■■□□□ 1.7
PARD3-201ENST00000340077 TOP2AP11388 1531 aaKnown RBP25.66■■□□□ 1.7
PARD3-201ENST00000340077 SMARCA2P51531 1590 aa25.62■■□□□ 1.69
PARD3-201ENST00000340077 SMARCA4P51532 1647 aa25.61■■□□□ 1.69
PARD3-201ENST00000340077 KANK4Q5T7N3 995 aaPredicted RBP25.59■■□□□ 1.69
PARD3-201ENST00000340077 FAM50AQ14320 339 aaKnown RBP25.56■■□□□ 1.68
PARD3-201ENST00000340077 HIRIP3Q9BW71 556 aaPredicted RBP25.55■■□□□ 1.68
PARD3-201ENST00000340077 BCANQ96GW7 911 aa25.54■■□□□ 1.68
PARD3-201ENST00000340077 RAPGEF2Q9Y4G8 1499 aa25.49■■□□□ 1.67
PARD3-201ENST00000340077 EEA1Q15075 1411 aa25.45■■□□□ 1.66
PARD3-201ENST00000340077 CEP164Q9UPV0 1460 aa25.43■■□□□ 1.66
PARD3-201ENST00000340077 BAZ1BQ9UIG0 1483 aaKnown RBP25.4■■□□□ 1.66
PARD3-201ENST00000340077 VPS8Q8N3P4 1428 aa25.33■■□□□ 1.65
PARD3-201ENST00000340077 CNGB1Q14028 1251 aaPredicted RBP25.3■■□□□ 1.64
PARD3-201ENST00000340077 KCNH8Q96L42 1107 aa25.3■■□□□ 1.64
PARD3-201ENST00000340077 DDX10Q13206 875 aaKnown RBP25.29■■□□□ 1.64
PARD3-201ENST00000340077 SYNJ1O43426 1573 aa25.28■■□□□ 1.64
PARD3-201ENST00000340077 EIF4G1Q04637 1599 aaKnown RBP25.27■■□□□ 1.64
PARD3-201ENST00000340077 ARID3CA6NKF2 412 aa25.26■■□□□ 1.63
PARD3-201ENST00000340077 SIN3AQ96ST3 1273 aa25.26■■□□□ 1.63
PARD3-201ENST00000340077 ATAD2BQ9ULI0 1458 aa25.21■■□□□ 1.63
PARD3-201ENST00000340077 TRIM52Q96A61 297 aa25.13■■□□□ 1.61
PARD3-201ENST00000340077 DHX57Q6P158 1386 aaKnown RBP25.08■■□□□ 1.61
PARD3-201ENST00000340077 UNC13AQ9UPW8 1703 aa25.05■■□□□ 1.6
PARD3-201ENST00000340077 KIF21BO75037 1637 aa25.04■■□□□ 1.6
PARD3-201ENST00000340077 SUPT16HQ9Y5B9 1047 aaKnown RBP25.02■■□□□ 1.6
PARD3-201ENST00000340077 FKBP8Q14318 412 aa25■■□□□ 1.59
PARD3-201ENST00000340077 BICRAQ9NZM4 1560 aa25■■□□□ 1.59
PARD3-201ENST00000340077 CCNB3Q8WWL7 1395 aa24.98■■□□□ 1.59
PARD3-201ENST00000340077 KIF27Q86VH2 1401 aa24.97■■□□□ 1.59
PARD3-201ENST00000340077 CHIC2Q9UKJ5 165 aa24.95■■□□□ 1.58
PARD3-201ENST00000340077 NEFLP07196 543 aa24.93■■□□□ 1.58
PARD3-201ENST00000340077 ARAP1Q96P48 1450 aa24.93■■□□□ 1.58
PARD3-201ENST00000340077 POLR3GLQ9BT43 218 aa24.92■■□□□ 1.58
PARD3-201ENST00000340077 RAB3GAP2Q9H2M9 1393 aa24.9■■□□□ 1.58
PARD3-201ENST00000340077 CUX2O14529 1486 aa24.9■■□□□ 1.58
PARD3-201ENST00000340077 IRX6P78412 446 aaPredicted RBP24.89■■□□□ 1.57
PARD3-201ENST00000340077 SENP3-EIF4A1A0A087X0R7 540 aa24.87■■□□□ 1.57
PARD3-201ENST00000340077 ANP32CO43423 234 aa24.81■■□□□ 1.56
PARD3-201ENST00000340077 CARMIL1Q5VZK9 1371 aa24.78■■□□□ 1.56
PARD3-201ENST00000340077 RRP7BPQ9NSQ0 103 aa24.77■■□□□ 1.56
PARD3-201ENST00000340077 CLSPNQ9HAW4 1339 aa24.69■■□□□ 1.54
PARD3-201ENST00000340077 TONSLQ96HA7 1378 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms