RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 NISCHQ9Y2I1 1504 aa34.31■■■■□ 3.08
RPRD1B-203ENST00000462548 CCDC180Q9P1Z9 1646 aa29.91■■■□□ 2.38
RPRD1B-203ENST00000462548 ZCCHC6Q5VYS8 1495 aaKnown RBP28.81■■■□□ 2.2
RPRD1B-203ENST00000462548 ABCC9O60706 1549 aa28.44■■■□□ 2.14
RPRD1B-203ENST00000462548 DCAF8L2P0C7V8 631 aa28.37■■■□□ 2.13
RPRD1B-203ENST00000462548 DCAF1Q9Y4B6 1507 aa28.32■■■□□ 2.12
RPRD1B-203ENST00000462548 MYO15BQ96JP2 1530 aa28■■■□□ 2.07
RPRD1B-203ENST00000462548 SHROOM4Q9ULL8 1493 aa28■■■□□ 2.07
RPRD1B-203ENST00000462548 NACADO15069 1562 aa27.87■■■□□ 2.05
RPRD1B-203ENST00000462548 RB1CC1Q8TDY2 1594 aa27.66■■■□□ 2.02
RPRD1B-203ENST00000462548 SCRIBQ14160 1630 aa27.57■■■□□ 2
RPRD1B-203ENST00000462548 UNC13AQ9UPW8 1703 aa27.18■■□□□ 1.94
RPRD1B-203ENST00000462548 BICRAQ9NZM4 1560 aa26.92■■□□□ 1.9
RPRD1B-203ENST00000462548 SUPT5HO00267 1087 aaKnown RBP26.86■■□□□ 1.89
RPRD1B-203ENST00000462548 PABPN1Q86U42 306 aaKnown RBP eCLIP26.82■■□□□ 1.88
RPRD1B-203ENST00000462548 CECR2Q9BXF3 1484 aa26.73■■□□□ 1.87
RPRD1B-203ENST00000462548 RSF1Q96T23 1441 aaPredicted RBP26.6■■□□□ 1.85
RPRD1B-203ENST00000462548 MROH2BQ7Z745 1585 aa26.55■■□□□ 1.84
RPRD1B-203ENST00000462548 BAZ1AQ9NRL2 1556 aaPredicted RBP26.47■■□□□ 1.83
RPRD1B-203ENST00000462548 SMARCA4P51532 1647 aa26.39■■□□□ 1.82
RPRD1B-203ENST00000462548 WIZO95785 1651 aa26.33■■□□□ 1.8
RPRD1B-203ENST00000462548 EIF4G1Q04637 1599 aaKnown RBP26.07■■□□□ 1.76
RPRD1B-203ENST00000462548 PEG3Q9GZU2 1588 aa26.05■■□□□ 1.76
RPRD1B-203ENST00000462548 TOP2AP11388 1531 aaKnown RBP26■■□□□ 1.75
RPRD1B-203ENST00000462548 ATAD2BQ9ULI0 1458 aa25.99■■□□□ 1.75
RPRD1B-203ENST00000462548 SMARCA2P51531 1590 aa25.92■■□□□ 1.74
RPRD1B-203ENST00000462548 BAZ1BQ9UIG0 1483 aaKnown RBP25.81■■□□□ 1.72
RPRD1B-203ENST00000462548 CCDC88BA6NC98 1476 aa25.77■■□□□ 1.72
RPRD1B-203ENST00000462548 NCAPD3P42695 1498 aa25.75■■□□□ 1.71
RPRD1B-203ENST00000462548 CC2D2AQ9P2K1 1620 aa25.72■■□□□ 1.71
RPRD1B-203ENST00000462548 HMGXB3Q12766 1538 aa25.69■■□□□ 1.7
RPRD1B-203ENST00000462548 CHIC1Q5VXU3 224 aa25.67■■□□□ 1.7
RPRD1B-203ENST00000462548 ABCC8Q09428 1581 aa25.23■■□□□ 1.63
RPRD1B-203ENST00000462548 DNAJC5BQ9UF47 199 aa25.23■■□□□ 1.63
RPRD1B-203ENST00000462548 TRIM41Q8WV44 630 aa25.21■■□□□ 1.63
RPRD1B-203ENST00000462548 CFTRP13569 1480 aa25.16■■□□□ 1.62
RPRD1B-203ENST00000462548 CADPSQ9ULU8 1353 aa25.09■■□□□ 1.61
RPRD1B-203ENST00000462548 WRNQ14191 1432 aaPredicted RBP eCLIP25.01■■□□□ 1.59
RPRD1B-203ENST00000462548 PRDM2Q13029 1718 aa25.01■■□□□ 1.59
RPRD1B-203ENST00000462548 NESP48681 1621 aa24.97■■□□□ 1.59
RPRD1B-203ENST00000462548 SYNJ1O43426 1573 aa24.96■■□□□ 1.59
RPRD1B-203ENST00000462548 LAMC3Q9Y6N6 1575 aa24.87■■□□□ 1.57
RPRD1B-203ENST00000462548 FANCD2Q9BXW9 1451 aa24.82■■□□□ 1.56
RPRD1B-203ENST00000462548 TOP2BQ02880 1626 aa24.82■■□□□ 1.56
RPRD1B-203ENST00000462548 CUX1P39880 1505 aa24.82■■□□□ 1.56
RPRD1B-203ENST00000462548 FAM9AQ8IZU1 332 aaPredicted RBP24.82■■□□□ 1.56
RPRD1B-203ENST00000462548 BIVM-ERCC5R4GMW8 1640 aa24.8■■□□□ 1.56
RPRD1B-203ENST00000462548 SOGA1O94964 1423 aa24.73■■□□□ 1.55
RPRD1B-203ENST00000462548 LOC105371045A0A1W2PR82 267 aa24.73■■□□□ 1.55
RPRD1B-203ENST00000462548 RUSC2Q8N2Y8 1516 aa24.68■■□□□ 1.54
RPRD1B-203ENST00000462548 PDS5BQ9NTI5 1447 aa24.67■■□□□ 1.54
RPRD1B-203ENST00000462548 CEP164Q9UPV0 1460 aa24.66■■□□□ 1.54
RPRD1B-203ENST00000462548 KIF21AQ7Z4S6 1674 aa24.64■■□□□ 1.53
RPRD1B-203ENST00000462548 DNMBPQ6XZF7 1577 aa24.58■■□□□ 1.52
RPRD1B-203ENST00000462548 URB2Q14146 1524 aaKnown RBP24.56■■□□□ 1.52
RPRD1B-203ENST00000462548 TOPBP1Q92547 1522 aa24.56■■□□□ 1.52
RPRD1B-203ENST00000462548 EEA1Q15075 1411 aa24.55■■□□□ 1.52
RPRD1B-203ENST00000462548 FGD5Q6ZNL6 1462 aa24.54■■□□□ 1.52
RPRD1B-203ENST00000462548 EHMT2Q96KQ7 1210 aa24.5■■□□□ 1.51
RPRD1B-203ENST00000462548 CSRNP3Q8WYN3 585 aa24.48■■□□□ 1.51
RPRD1B-203ENST00000462548 POLA1P09884 1462 aaPredicted RBP24.44■■□□□ 1.5
RPRD1B-203ENST00000462548 RAD54L2Q9Y4B4 1467 aa24.39■■□□□ 1.5
RPRD1B-203ENST00000462548 MRC2Q9UBG0 1479 aa24.39■■□□□ 1.49
RPRD1B-203ENST00000462548 KIF27Q86VH2 1401 aa24.36■■□□□ 1.49
RPRD1B-203ENST00000462548 CUX2O14529 1486 aa24.36■■□□□ 1.49
RPRD1B-203ENST00000462548 ERCC6Q03468 1493 aa24.33■■□□□ 1.49
RPRD1B-203ENST00000462548 ABCA10Q8WWZ4 1543 aa24.3■■□□□ 1.48
RPRD1B-203ENST00000462548 KIF21BO75037 1637 aa24.29■■□□□ 1.48
RPRD1B-203ENST00000462548 WDR62O43379 1518 aa24.27■■□□□ 1.48
RPRD1B-203ENST00000462548 WDR97A6NE52 1622 aa24.26■■□□□ 1.47
RPRD1B-203ENST00000462548 GOLGA3Q08378 1498 aa24.25■■□□□ 1.47
RPRD1B-203ENST00000462548 THOC2Q8NI27 1593 aaKnown RBP24.25■■□□□ 1.47
RPRD1B-203ENST00000462548 PRXQ9BXM0 1461 aa24.22■■□□□ 1.47
RPRD1B-203ENST00000462548 RAPGEF2Q9Y4G8 1499 aa24.22■■□□□ 1.47
RPRD1B-203ENST00000462548 TARBP1Q13395 1621 aaKnown RBP24.21■■□□□ 1.47
RPRD1B-203ENST00000462548 IGF1RP08069 1367 aa24.21■■□□□ 1.47
RPRD1B-203ENST00000462548 TNIKQ9UKE5 1360 aa24.16■■□□□ 1.46
RPRD1B-203ENST00000462548 UBTFP17480 764 aaKnown RBP24.15■■□□□ 1.46
RPRD1B-203ENST00000462548 TDRD9Q8NDG6 1382 aaKnown RBP24.15■■□□□ 1.46
RPRD1B-203ENST00000462548 ABCA5Q8WWZ7 1642 aa24.13■■□□□ 1.45
RPRD1B-203ENST00000462548 ERICH3Q5RHP9 1530 aa24.12■■□□□ 1.45
RPRD1B-203ENST00000462548 GAPVD1Q14C86 1478 aa24.06■■□□□ 1.44
RPRD1B-203ENST00000462548 IFT140Q96RY7 1462 aa24.06■■□□□ 1.44
RPRD1B-203ENST00000462548 CARMIL1Q5VZK9 1371 aa24.06■■□□□ 1.44
RPRD1B-203ENST00000462548 CEP162Q5TB80 1403 aa24.05■■□□□ 1.44
RPRD1B-203ENST00000462548 ZNF608Q9ULD9 1512 aaPredicted RBP24.01■■□□□ 1.43
RPRD1B-203ENST00000462548 AQRO60306 1485 aaKnown RBP eCLIP24.01■■□□□ 1.436e-8■■□□□ 12.4
RPRD1B-203ENST00000462548 CUL7Q14999 1698 aa23.97■■□□□ 1.43
RPRD1B-203ENST00000462548 PBRM1Q86U86 1689 aa23.95■■□□□ 1.42
RPRD1B-203ENST00000462548 EIF4G3O43432 1585 aaKnown RBP23.89■■□□□ 1.42
RPRD1B-203ENST00000462548 CLIP1P30622 1438 aa23.87■■□□□ 1.41
RPRD1B-203ENST00000462548 GRIN2BQ13224 1484 aa23.87■■□□□ 1.41
RPRD1B-203ENST00000462548 RANGAP1P46060 587 aaPredicted RBP23.85■■□□□ 1.41
RPRD1B-203ENST00000462548 ADAMTS12P58397 1594 aa23.82■■□□□ 1.4
RPRD1B-203ENST00000462548 FHAD1B1AJZ9 1412 aa23.79■■□□□ 1.4
RPRD1B-203ENST00000462548 SNAPC4Q5SXM2 1469 aa23.76■■□□□ 1.39
RPRD1B-203ENST00000462548 CTTNBP2Q8WZ74 1663 aa23.72■■□□□ 1.39
RPRD1B-203ENST00000462548 ARAP1Q96P48 1450 aa23.7■■□□□ 1.38
RPRD1B-203ENST00000462548 ARHGAP35Q9NRY4 1499 aa23.7■■□□□ 1.38
RPRD1B-203ENST00000462548 MAGI1Q96QZ7 1491 aaPredicted RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms