RNA–Protein interactions for RNA: ENST00000622494.1

RPRD1B-209, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-209ENST00000622494 AEBP2Q6ZN18 517 aaPredicted RBP17.98■□□□□ 0.47
RPRD1B-209ENST00000622494 CHIC1Q5VXU3 224 aa17.6■□□□□ 0.41
RPRD1B-209ENST00000622494 PHF23Q9BUL5 403 aaPredicted RBP15.49■□□□□ 0.07
RPRD1B-209ENST00000622494 SENP3Q9H4L4 574 aaPredicted RBP15.22■□□□□ 0.03
RPRD1B-209ENST00000622494 PLPPR3Q6T4P5 718 aa14.28□□□□□ -0.12
RPRD1B-209ENST00000622494 FOXD1Q16676 465 aa14.13□□□□□ -0.15
RPRD1B-209ENST00000622494 PPP6R1Q9UPN7 881 aa13.63□□□□□ -0.23
RPRD1B-209ENST00000622494 ADRA2BP18089 450 aa13.59□□□□□ -0.23
RPRD1B-209ENST00000622494 PIAS4Q8N2W9 510 aaPredicted RBP13.29□□□□□ -0.28
RPRD1B-209ENST00000622494 MSH5O43196 834 aa13.01□□□□□ -0.33
RPRD1B-209ENST00000622494 PPP4R3CPQ6ZMV5 832 aa12.58□□□□□ -0.4
RPRD1B-209ENST00000622494 SCAF1Q9H7N4 1312 aaKnown RBP12.42□□□□□ -0.42
RPRD1B-209ENST00000622494 NISCHQ9Y2I1 1504 aa12.34□□□□□ -0.43
RPRD1B-209ENST00000622494 KCNA4P22459 653 aa12.34□□□□□ -0.43
RPRD1B-209ENST00000622494 MAPK8IP2Q13387 824 aaPredicted RBP12.32□□□□□ -0.44
RPRD1B-209ENST00000622494 NCBP3Q53F19 620 aaKnown RBP12.24□□□□□ -0.45
RPRD1B-209ENST00000622494 CNKSR2Q8WXI2 1034 aa12.24□□□□□ -0.45
RPRD1B-209ENST00000622494 DMRT2Q9Y5R5 561 aa12.19□□□□□ -0.46
RPRD1B-209ENST00000622494 NPM3O75607 178 aaKnown RBP12.1□□□□□ -0.47
RPRD1B-209ENST00000622494 RNF216Q9NWF9 866 aaPredicted RBP12□□□□□ -0.49
RPRD1B-209ENST00000622494 HOXD11P31277 338 aaPredicted RBP11.97□□□□□ -0.49
RPRD1B-209ENST00000622494 DNAJC5BQ9UF47 199 aa11.86□□□□□ -0.51
RPRD1B-209ENST00000622494 POTEDQ86YR6 584 aa11.78□□□□□ -0.52
RPRD1B-209ENST00000622494 SLC4A1APQ9BWU0 796 aaKnown RBP11.73□□□□□ -0.53
RPRD1B-209ENST00000622494 DCAF8L1A6NGE4 600 aa11.51□□□□□ -0.57
RPRD1B-209ENST00000622494 SLC4A2P04920 1241 aa11.44□□□□□ -0.58
RPRD1B-209ENST00000622494 ZBTB22O15209 634 aa11.38□□□□□ -0.59
RPRD1B-209ENST00000622494 EHMT2Q96KQ7 1210 aa11.38□□□□□ -0.59
RPRD1B-209ENST00000622494 FOXD4L1Q9NU39 408 aa11.35□□□□□ -0.59
RPRD1B-209ENST00000622494 CSRNP3Q8WYN3 585 aa11.34□□□□□ -0.59
RPRD1B-209ENST00000622494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.3□□□□□ -0.67e-14■□□□□ 8
RPRD1B-209ENST00000622494 U3KPZ7 1027 aaPredicted RBP11.2□□□□□ -0.62
RPRD1B-209ENST00000622494 MYCNP04198 464 aaPredicted RBP11.17□□□□□ -0.62
RPRD1B-209ENST00000622494 RNF39Q9H2S5 420 aa11.17□□□□□ -0.62
RPRD1B-209ENST00000622494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.03□□□□□ -0.64
RPRD1B-209ENST00000622494 C1QBPQ07021 282 aaKnown RBP11.03□□□□□ -0.64
RPRD1B-209ENST00000622494 HNRNPUL2Q1KMD3 747 aaKnown RBP11.03□□□□□ -0.64
RPRD1B-209ENST00000622494 ABCC9O60706 1549 aa11.01□□□□□ -0.65
RPRD1B-209ENST00000622494 SAMD1Q6SPF0 538 aaPredicted RBP11□□□□□ -0.65
RPRD1B-209ENST00000622494 CCDC180Q9P1Z9 1646 aa10.99□□□□□ -0.65
RPRD1B-209ENST00000622494 ATXN8OSP0DMR3 200 aa10.98□□□□□ -0.65
RPRD1B-209ENST00000622494 APLP2Q06481 763 aa10.91□□□□□ -0.66
RPRD1B-209ENST00000622494 ATF5Q9Y2D1 282 aaPredicted RBP10.88□□□□□ -0.67
RPRD1B-209ENST00000622494 SPINK5Q9NQ38 1064 aaPredicted RBP10.84□□□□□ -0.67
RPRD1B-209ENST00000622494 CACNB1Q02641 598 aaPredicted RBP10.77□□□□□ -0.69
RPRD1B-209ENST00000622494 ZNF219Q9P2Y4 722 aaPredicted RBP10.76□□□□□ -0.69
RPRD1B-209ENST00000622494 CAPN15O75808 1086 aa10.75□□□□□ -0.69
RPRD1B-209ENST00000622494 TRHP20396 242 aaPredicted RBP10.7□□□□□ -0.7
RPRD1B-209ENST00000622494 DSG3P32926 999 aa10.64□□□□□ -0.71
RPRD1B-209ENST00000622494 POLA2Q14181 598 aa10.57□□□□□ -0.72
RPRD1B-209ENST00000622494 ABCB7O75027 752 aa10.55□□□□□ -0.72
RPRD1B-209ENST00000622494 DCAF8L2P0C7V8 631 aa10.42□□□□□ -0.74
RPRD1B-209ENST00000622494 MKRN4PQ13434 485 aaPredicted RBP10.42□□□□□ -0.74
RPRD1B-209ENST00000622494 ZBTB12Q9Y330 459 aaPredicted RBP10.42□□□□□ -0.74
RPRD1B-209ENST00000622494 RB1CC1Q8TDY2 1594 aa10.39□□□□□ -0.75
RPRD1B-209ENST00000622494 FBLN2P98095 1184 aa10.37□□□□□ -0.75
RPRD1B-209ENST00000622494 UNC13AQ9UPW8 1703 aa10.35□□□□□ -0.75
RPRD1B-209ENST00000622494 NACADO15069 1562 aa10.32□□□□□ -0.76
RPRD1B-209ENST00000622494 PABPN1Q86U42 306 aaKnown RBP eCLIP10.29□□□□□ -0.76
RPRD1B-209ENST00000622494 ZCCHC6Q5VYS8 1495 aaKnown RBP10.26□□□□□ -0.77
RPRD1B-209ENST00000622494 OSCARQ8IYS5 282 aa10.22□□□□□ -0.77
RPRD1B-209ENST00000622494 BICRAQ9NZM4 1560 aa10.22□□□□□ -0.77
RPRD1B-209ENST00000622494 FKBP8Q14318 412 aa10.19□□□□□ -0.78
RPRD1B-209ENST00000622494 SCRIBQ14160 1630 aa10.18□□□□□ -0.78
RPRD1B-209ENST00000622494 SPDYE4A6NLX3 237 aa10.16□□□□□ -0.78
RPRD1B-209ENST00000622494 SPDYE2BA6NHP3 402 aa10.15□□□□□ -0.78
RPRD1B-209ENST00000622494 SPDYE6P0CI01 402 aa10.15□□□□□ -0.78
RPRD1B-209ENST00000622494 SPDYE2Q495Y8 402 aa10.15□□□□□ -0.78
RPRD1B-209ENST00000622494 MYO15BQ96JP2 1530 aa10.13□□□□□ -0.79
RPRD1B-209ENST00000622494 SSUH2Q9Y2M2 353 aa10.12□□□□□ -0.79
RPRD1B-209ENST00000622494 PROM2Q8N271 834 aa10.1□□□□□ -0.79
RPRD1B-209ENST00000622494 RBM42Q9BTD8 480 aaKnown RBP10.1□□□□□ -0.79
RPRD1B-209ENST00000622494 DCAF1Q9Y4B6 1507 aa10.09□□□□□ -0.79
RPRD1B-209ENST00000622494 ZNF692Q9BU19 519 aaPredicted RBP10.08□□□□□ -0.8
RPRD1B-209ENST00000622494 AKT1S1Q96B36 256 aa10.01□□□□□ -0.81
RPRD1B-209ENST00000622494 CC2D2AQ9P2K1 1620 aa9.93□□□□□ -0.82
RPRD1B-209ENST00000622494 EIF4G1Q04637 1599 aaKnown RBP9.9□□□□□ -0.82
RPRD1B-209ENST00000622494 REM2Q8IYK8 340 aaPredicted RBP9.9□□□□□ -0.82
RPRD1B-209ENST00000622494 CECR2Q9BXF3 1484 aa9.84□□□□□ -0.83
RPRD1B-209ENST00000622494 SHROOM4Q9ULL8 1493 aa9.84□□□□□ -0.83
RPRD1B-209ENST00000622494 SPDYE1Q8NFV5 336 aaPredicted RBP9.83□□□□□ -0.84
RPRD1B-209ENST00000622494 FBXO3Q9UK99 471 aa9.83□□□□□ -0.84
RPRD1B-209ENST00000622494 STAG3Q9UJ98 1225 aa9.81□□□□□ -0.84
RPRD1B-209ENST00000622494 PITPNM1O00562 1244 aa9.79□□□□□ -0.84
RPRD1B-209ENST00000622494 CLEC11AQ9Y240 323 aa9.72□□□□□ -0.85
RPRD1B-209ENST00000622494 VASPP50552 380 aaPredicted RBP9.71□□□□□ -0.86
RPRD1B-209ENST00000622494 PRR29P0C7W0 189 aa9.67□□□□□ -0.86
RPRD1B-209ENST00000622494 CHRDL2Q6WN34 429 aa9.66□□□□□ -0.86
RPRD1B-209ENST00000622494 SMARCA4P51532 1647 aa9.64□□□□□ -0.87
RPRD1B-209ENST00000622494 FXR2P51116 673 aaKnown RBP eCLIP9.63□□□□□ -0.87
RPRD1B-209ENST00000622494 CREBZFQ9NS37 354 aa9.62□□□□□ -0.87
RPRD1B-209ENST00000622494 MROH2BQ7Z745 1585 aa9.59□□□□□ -0.87
RPRD1B-209ENST00000622494 IFNLR1Q8IU57 520 aaPredicted RBP9.59□□□□□ -0.87
RPRD1B-209ENST00000622494 MIER1Q8N108 512 aa9.59□□□□□ -0.87
RPRD1B-209ENST00000622494 ATAD2BQ9ULI0 1458 aa9.59□□□□□ -0.87
RPRD1B-209ENST00000622494 PLCD3Q8N3E9 789 aa9.57□□□□□ -0.88
RPRD1B-209ENST00000622494 PIP4P2Q8N4L2 257 aa9.57□□□□□ -0.88
RPRD1B-209ENST00000622494 MNX1P50219 401 aaPredicted RBP9.56□□□□□ -0.88
RPRD1B-209ENST00000622494 NCAPD3P42695 1498 aa9.53□□□□□ -0.88
RPRD1B-209ENST00000622494 NESP48681 1621 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms