RNA–Protein interactions for RNA: ENST00000404127.6

ARHGAP4-205, Transcript of Rho GTPase activating protein 4, humanhuman

TSL 5

Gene ARHGAP4, Length 3,232 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP4-205ENST00000404127 NISCHQ9Y2I1 1504 aa32.44■■■□□ 2.78
ARHGAP4-205ENST00000404127 SHROOM4Q9ULL8 1493 aa29.03■■■□□ 2.24
ARHGAP4-205ENST00000404127 SUPT5HO00267 1087 aaKnown RBP28.7■■■□□ 2.18
ARHGAP4-205ENST00000404127 DCAF8L2P0C7V8 631 aa28■■■□□ 2.07
ARHGAP4-205ENST00000404127 MYO15BQ96JP2 1530 aa27.75■■■□□ 2.03
ARHGAP4-205ENST00000404127 PCGF6Q9BYE7 350 aa27.72■■■□□ 2.03
ARHGAP4-205ENST00000404127 CHIC1Q5VXU3 224 aa27.71■■■□□ 2.03
ARHGAP4-205ENST00000404127 HRCP23327 699 aa27.65■■■□□ 2.02
ARHGAP4-205ENST00000404127 PPARGC1BQ86YN6 1023 aaKnown RBP27.57■■■□□ 2
ARHGAP4-205ENST00000404127 CCDC180Q9P1Z9 1646 aa27.51■■□□□ 1.99
ARHGAP4-205ENST00000404127 ZCCHC6Q5VYS8 1495 aaKnown RBP27.42■■□□□ 1.98
ARHGAP4-205ENST00000404127 LOC105371045A0A1W2PR82 267 aa27.34■■□□□ 1.97
ARHGAP4-205ENST00000404127 EHMT2Q96KQ7 1210 aa26.85■■□□□ 1.89
ARHGAP4-205ENST00000404127 FAM9AQ8IZU1 332 aaPredicted RBP26.67■■□□□ 1.86
ARHGAP4-205ENST00000404127 TRIM26Q12899 539 aaPredicted RBP26.61■■□□□ 1.85
ARHGAP4-205ENST00000404127 DCAF1Q9Y4B6 1507 aa26.58■■□□□ 1.85
ARHGAP4-205ENST00000404127 ABCC9O60706 1549 aa26.51■■□□□ 1.83
ARHGAP4-205ENST00000404127 TRIM41Q8WV44 630 aa26.37■■□□□ 1.81
ARHGAP4-205ENST00000404127 SCRIBQ14160 1630 aa26.2■■□□□ 1.79
ARHGAP4-205ENST00000404127 RSF1Q96T23 1441 aaPredicted RBP26.06■■□□□ 1.76
ARHGAP4-205ENST00000404127 SCAF1Q9H7N4 1312 aaKnown RBP26.01■■□□□ 1.75
ARHGAP4-205ENST00000404127 TTBK1Q5TCY1 1321 aaPredicted RBP25.99■■□□□ 1.75
ARHGAP4-205ENST00000404127 ZEB1P37275 1124 aaPredicted RBP25.98■■□□□ 1.75
ARHGAP4-205ENST00000404127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.92■■□□□ 1.74
ARHGAP4-205ENST00000404127 RB1CC1Q8TDY2 1594 aa25.89■■□□□ 1.74
ARHGAP4-205ENST00000404127 CCER1Q8TC90 406 aaPredicted RBP25.72■■□□□ 1.71
ARHGAP4-205ENST00000404127 NACADO15069 1562 aa25.69■■□□□ 1.7
ARHGAP4-205ENST00000404127 CECR2Q9BXF3 1484 aa25.66■■□□□ 1.7
ARHGAP4-205ENST00000404127 NEUROD1Q13562 356 aa25.55■■□□□ 1.68
ARHGAP4-205ENST00000404127 MROH2BQ7Z745 1585 aa25.46■■□□□ 1.67
ARHGAP4-205ENST00000404127 PABPN1Q86U42 306 aaKnown RBP eCLIP25.46■■□□□ 1.67
ARHGAP4-205ENST00000404127 PELP1Q8IZL8 1130 aaKnown RBP25.42■■□□□ 1.66
ARHGAP4-205ENST00000404127 ACIN1Q9UKV3 1341 aaKnown RBP25.41■■□□□ 1.66
ARHGAP4-205ENST00000404127 DIEXFQ68CQ4 756 aaKnown RBP25.39■■□□□ 1.66
ARHGAP4-205ENST00000404127 GTF3C3Q9Y5Q9 886 aa25.37■■□□□ 1.65
ARHGAP4-205ENST00000404127 WIZO95785 1651 aa25.34■■□□□ 1.65
ARHGAP4-205ENST00000404127 YTHDC1Q96MU7 727 aaKnown RBP25.27■■□□□ 1.64
ARHGAP4-205ENST00000404127 UBTFP17480 764 aaKnown RBP25.19■■□□□ 1.62
ARHGAP4-205ENST00000404127 ABCC8Q09428 1581 aa25.16■■□□□ 1.62
ARHGAP4-205ENST00000404127 CCDC88BA6NC98 1476 aa25.12■■□□□ 1.61
ARHGAP4-205ENST00000404127 CENPBP07199 599 aaPredicted RBP25.1■■□□□ 1.61
ARHGAP4-205ENST00000404127 RANGAP1P46060 587 aaPredicted RBP25.09■■□□□ 1.61
ARHGAP4-205ENST00000404127 SOGA1O94964 1423 aa25.08■■□□□ 1.61
ARHGAP4-205ENST00000404127 HNRNPUL2Q1KMD3 747 aaKnown RBP25.07■■□□□ 1.6
ARHGAP4-205ENST00000404127 CEP162Q5TB80 1403 aa25.03■■□□□ 1.6
ARHGAP4-205ENST00000404127 RUSC2Q8N2Y8 1516 aa24.98■■□□□ 1.59
ARHGAP4-205ENST00000404127 BAZ1AQ9NRL2 1556 aaPredicted RBP24.96■■□□□ 1.59
ARHGAP4-205ENST00000404127 ZNF316A6NFI3 1004 aaPredicted RBP24.93■■□□□ 1.58
ARHGAP4-205ENST00000404127 CSRNP3Q8WYN3 585 aa24.92■■□□□ 1.58
ARHGAP4-205ENST00000404127 UNC13AQ9UPW8 1703 aa24.9■■□□□ 1.58
ARHGAP4-205ENST00000404127 MIER1Q8N108 512 aa24.89■■□□□ 1.58
ARHGAP4-205ENST00000404127 EIF4G1Q04637 1599 aaKnown RBP24.79■■□□□ 1.56
ARHGAP4-205ENST00000404127 SMARCA4P51532 1647 aa24.77■■□□□ 1.56
ARHGAP4-205ENST00000404127 WRNQ14191 1432 aaPredicted RBP eCLIP24.76■■□□□ 1.55
ARHGAP4-205ENST00000404127 TNIKQ9UKE5 1360 aa24.76■■□□□ 1.55
ARHGAP4-205ENST00000404127 BICRAQ9NZM4 1560 aa24.67■■□□□ 1.54
ARHGAP4-205ENST00000404127 SMARCA2P51531 1590 aa24.63■■□□□ 1.53
ARHGAP4-205ENST00000404127 TOP2AP11388 1531 aaKnown RBP24.63■■□□□ 1.53
ARHGAP4-205ENST00000404127 APLP2Q06481 763 aa24.57■■□□□ 1.52
ARHGAP4-205ENST00000404127 GOLGA3Q08378 1498 aa24.52■■□□□ 1.52
ARHGAP4-205ENST00000404127 CLIP1P30622 1438 aa24.46■■□□□ 1.51
ARHGAP4-205ENST00000404127 EEA1Q15075 1411 aa24.39■■□□□ 1.49
ARHGAP4-205ENST00000404127 ITGAEP38570 1179 aa24.38■■□□□ 1.49
ARHGAP4-205ENST00000404127 BAZ1BQ9UIG0 1483 aaKnown RBP24.37■■□□□ 1.49
ARHGAP4-205ENST00000404127 ATAD2BQ9ULI0 1458 aa24.33■■□□□ 1.49
ARHGAP4-205ENST00000404127 RAPGEF2Q9Y4G8 1499 aa24.33■■□□□ 1.49
ARHGAP4-205ENST00000404127 KANK4Q5T7N3 995 aaPredicted RBP24.29■■□□□ 1.48
ARHGAP4-205ENST00000404127 SYNJ1O43426 1573 aa24.29■■□□□ 1.48
ARHGAP4-205ENST00000404127 CEP164Q9UPV0 1460 aa24.29■■□□□ 1.48
ARHGAP4-205ENST00000404127 VPS8Q8N3P4 1428 aa24.26■■□□□ 1.47
ARHGAP4-205ENST00000404127 KCNH8Q96L42 1107 aa24.2■■□□□ 1.47
ARHGAP4-205ENST00000404127 SUPT16HQ9Y5B9 1047 aaKnown RBP24.16■■□□□ 1.46
ARHGAP4-205ENST00000404127 DHX57Q6P158 1386 aaKnown RBP24.13■■□□□ 1.45
ARHGAP4-205ENST00000404127 KIF21BO75037 1637 aa24.11■■□□□ 1.45
ARHGAP4-205ENST00000404127 BCANQ96GW7 911 aa24.1■■□□□ 1.45
ARHGAP4-205ENST00000404127 MYT1Q01538 1121 aa24.07■■□□□ 1.44
ARHGAP4-205ENST00000404127 PEG3Q9GZU2 1588 aa24.06■■□□□ 1.44
ARHGAP4-205ENST00000404127 HIRIP3Q9BW71 556 aaPredicted RBP24■■□□□ 1.43
ARHGAP4-205ENST00000404127 ATP1B4Q9UN42 357 aaPredicted RBP23.9■■□□□ 1.42
ARHGAP4-205ENST00000404127 TSHZ2Q9NRE2 1034 aa23.89■■□□□ 1.42
ARHGAP4-205ENST00000404127 ARAP1Q96P48 1450 aa23.89■■□□□ 1.42
ARHGAP4-205ENST00000404127 DDX10Q13206 875 aaKnown RBP23.89■■□□□ 1.42
ARHGAP4-205ENST00000404127 SIN3AQ96ST3 1273 aa23.88■■□□□ 1.41
ARHGAP4-205ENST00000404127 P3H3Q8IVL6 736 aa23.84■■□□□ 1.41
ARHGAP4-205ENST00000404127 NCAPD3P42695 1498 aa23.82■■□□□ 1.4
ARHGAP4-205ENST00000404127 FAM50AQ14320 339 aaKnown RBP23.8■■□□□ 1.4
ARHGAP4-205ENST00000404127 CLSPNQ9HAW4 1339 aa23.8■■□□□ 1.4
ARHGAP4-205ENST00000404127 CCNB3Q8WWL7 1395 aa23.78■■□□□ 1.4
ARHGAP4-205ENST00000404127 FKBP8Q14318 412 aa23.78■■□□□ 1.4
ARHGAP4-205ENST00000404127 TRIM52Q96A61 297 aa23.75■■□□□ 1.39
ARHGAP4-205ENST00000404127 RAB3GAP2Q9H2M9 1393 aa23.75■■□□□ 1.39
ARHGAP4-205ENST00000404127 PRXQ9BXM0 1461 aa23.73■■□□□ 1.39
ARHGAP4-205ENST00000404127 TOP2BQ02880 1626 aa23.7■■□□□ 1.38
ARHGAP4-205ENST00000404127 HMGXB3Q12766 1538 aa23.69■■□□□ 1.38
ARHGAP4-205ENST00000404127 RRBP1Q9P2E9 1410 aaKnown RBP23.67■■□□□ 1.38
ARHGAP4-205ENST00000404127 ARHGAP35Q9NRY4 1499 aa23.63■■□□□ 1.37
ARHGAP4-205ENST00000404127 KIF27Q86VH2 1401 aa23.61■■□□□ 1.37
ARHGAP4-205ENST00000404127 CUX1P39880 1505 aa23.59■■□□□ 1.37
ARHGAP4-205ENST00000404127 CC2D2AQ9P2K1 1620 aa23.57■■□□□ 1.36
ARHGAP4-205ENST00000404127 CFTRP13569 1480 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms