RNA–Protein interactions for RNA: ENST00000228862.3

DUSP16-201, Transcript of dual specificity phosphatase 16, humanhuman

TSL 5 BASIC

Gene DUSP16, Length 3,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP16-201ENST00000228862 NISCHQ9Y2I1 1504 aa26.78■■□□□ 1.88
DUSP16-201ENST00000228862 SHROOM4Q9ULL8 1493 aa23.17■■□□□ 1.3
DUSP16-201ENST00000228862 DCAF8L2P0C7V8 631 aa22.85■■□□□ 1.25
DUSP16-201ENST00000228862 CCDC180Q9P1Z9 1646 aa22.82■■□□□ 1.24
DUSP16-201ENST00000228862 SUPT5HO00267 1087 aaKnown RBP22.66■■□□□ 1.22
DUSP16-201ENST00000228862 ZCCHC6Q5VYS8 1495 aaKnown RBP22.55■■□□□ 1.2
DUSP16-201ENST00000228862 DCAF1Q9Y4B6 1507 aa21.83■■□□□ 1.09
DUSP16-201ENST00000228862 ABCC9O60706 1549 aa21.7■■□□□ 1.06
DUSP16-201ENST00000228862 CHIC1Q5VXU3 224 aa21.69■■□□□ 1.06
DUSP16-201ENST00000228862 SCRIBQ14160 1630 aa21.54■■□□□ 1.04
DUSP16-201ENST00000228862 MYO15BQ96JP2 1530 aa21.52■■□□□ 1.04
DUSP16-201ENST00000228862 LOC105371045A0A1W2PR82 267 aa21.24■□□□□ 0.99
DUSP16-201ENST00000228862 NACADO15069 1562 aa21.22■□□□□ 0.99
DUSP16-201ENST00000228862 RSF1Q96T23 1441 aaPredicted RBP21.14■□□□□ 0.97
DUSP16-201ENST00000228862 PCGF6Q9BYE7 350 aa21.07■□□□□ 0.96
DUSP16-201ENST00000228862 EHMT2Q96KQ7 1210 aa21.06■□□□□ 0.96
DUSP16-201ENST00000228862 FAM9AQ8IZU1 332 aaPredicted RBP21.04■□□□□ 0.96
DUSP16-201ENST00000228862 CECR2Q9BXF3 1484 aa21.03■□□□□ 0.96
DUSP16-201ENST00000228862 RB1CC1Q8TDY2 1594 aa20.98■□□□□ 0.95
DUSP16-201ENST00000228862 TRIM41Q8WV44 630 aa20.97■□□□□ 0.95
DUSP16-201ENST00000228862 MROH2BQ7Z745 1585 aa20.87■□□□□ 0.93
DUSP16-201ENST00000228862 PABPN1Q86U42 306 aaKnown RBP eCLIP20.76■□□□□ 0.91
DUSP16-201ENST00000228862 WIZO95785 1651 aa20.76■□□□□ 0.91
DUSP16-201ENST00000228862 HRCP23327 699 aa20.72■□□□□ 0.91
DUSP16-201ENST00000228862 UNC13AQ9UPW8 1703 aa20.71■□□□□ 0.91
DUSP16-201ENST00000228862 PPARGC1BQ86YN6 1023 aaKnown RBP20.59■□□□□ 0.89
DUSP16-201ENST00000228862 BAZ1AQ9NRL2 1556 aaPredicted RBP20.57■□□□□ 0.88
DUSP16-201ENST00000228862 TRIM26Q12899 539 aaPredicted RBP20.47■□□□□ 0.87
DUSP16-201ENST00000228862 SMARCA4P51532 1647 aa20.47■□□□□ 0.87
DUSP16-201ENST00000228862 BICRAQ9NZM4 1560 aa20.47■□□□□ 0.87
DUSP16-201ENST00000228862 TOP2AP11388 1531 aaKnown RBP20.32■□□□□ 0.84
DUSP16-201ENST00000228862 CCDC88BA6NC98 1476 aa20.31■□□□□ 0.84
DUSP16-201ENST00000228862 SLC24A1O60721 1099 aa20.3■□□□□ 0.84
DUSP16-201ENST00000228862 TTBK1Q5TCY1 1321 aaPredicted RBP20.3■□□□□ 0.84
DUSP16-201ENST00000228862 ABCC8Q09428 1581 aa20.29■□□□□ 0.84
DUSP16-201ENST00000228862 SMARCA2P51531 1590 aa20.24■□□□□ 0.83
DUSP16-201ENST00000228862 EIF4G1Q04637 1599 aaKnown RBP20.19■□□□□ 0.82
DUSP16-201ENST00000228862 SOGA1O94964 1423 aa20.09■□□□□ 0.81
DUSP16-201ENST00000228862 UBTFP17480 764 aaKnown RBP20.09■□□□□ 0.81
DUSP16-201ENST00000228862 ATAD2BQ9ULI0 1458 aa20.05■□□□□ 0.8
DUSP16-201ENST00000228862 RUSC2Q8N2Y8 1516 aa20.01■□□□□ 0.79
DUSP16-201ENST00000228862 RANGAP1P46060 587 aaPredicted RBP20■□□□□ 0.79
DUSP16-201ENST00000228862 BAZ1BQ9UIG0 1483 aaKnown RBP20■□□□□ 0.79
DUSP16-201ENST00000228862 PEG3Q9GZU2 1588 aa19.99■□□□□ 0.79
DUSP16-201ENST00000228862 CSRNP3Q8WYN3 585 aa19.98■□□□□ 0.79
DUSP16-201ENST00000228862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.92■□□□□ 0.78
DUSP16-201ENST00000228862 WRNQ14191 1432 aaPredicted RBP eCLIP19.91■□□□□ 0.78
DUSP16-201ENST00000228862 CEP162Q5TB80 1403 aa19.87■□□□□ 0.77
DUSP16-201ENST00000228862 ZEB1P37275 1124 aaPredicted RBP19.86■□□□□ 0.77
DUSP16-201ENST00000228862 CCER1Q8TC90 406 aaPredicted RBP19.83■□□□□ 0.76
DUSP16-201ENST00000228862 SYNJ1O43426 1573 aa19.77■□□□□ 0.75
DUSP16-201ENST00000228862 TNIKQ9UKE5 1360 aa19.76■□□□□ 0.75
DUSP16-201ENST00000228862 EEA1Q15075 1411 aa19.7■□□□□ 0.74
DUSP16-201ENST00000228862 GOLGA3Q08378 1498 aa19.7■□□□□ 0.74
DUSP16-201ENST00000228862 NCAPD3P42695 1498 aa19.67■□□□□ 0.74
DUSP16-201ENST00000228862 HNRNPUL2Q1KMD3 747 aaKnown RBP19.6■□□□□ 0.73
DUSP16-201ENST00000228862 HMGXB3Q12766 1538 aa19.6■□□□□ 0.73
DUSP16-201ENST00000228862 CEP164Q9UPV0 1460 aa19.58■□□□□ 0.72
DUSP16-201ENST00000228862 APLP2Q06481 763 aa19.57■□□□□ 0.72
DUSP16-201ENST00000228862 CLIP1P30622 1438 aa19.57■□□□□ 0.72
DUSP16-201ENST00000228862 RAPGEF2Q9Y4G8 1499 aa19.56■□□□□ 0.72
DUSP16-201ENST00000228862 TOP2BQ02880 1626 aa19.48■□□□□ 0.71
DUSP16-201ENST00000228862 CC2D2AQ9P2K1 1620 aa19.44■□□□□ 0.7
DUSP16-201ENST00000228862 CFTRP13569 1480 aa19.44■□□□□ 0.7
DUSP16-201ENST00000228862 CUX1P39880 1505 aa19.43■□□□□ 0.7
DUSP16-201ENST00000228862 KIF21BO75037 1637 aa19.41■□□□□ 0.7
DUSP16-201ENST00000228862 BIVM-ERCC5R4GMW8 1640 aa19.39■□□□□ 0.69
DUSP16-201ENST00000228862 VPS8Q8N3P4 1428 aa19.36■□□□□ 0.69
DUSP16-201ENST00000228862 CADPSQ9ULU8 1353 aa19.33■□□□□ 0.69
DUSP16-201ENST00000228862 KIF27Q86VH2 1401 aa19.3■□□□□ 0.68
DUSP16-201ENST00000228862 DNAJC5BQ9UF47 199 aa19.27■□□□□ 0.68
DUSP16-201ENST00000228862 KANK4Q5T7N3 995 aaPredicted RBP19.26■□□□□ 0.67
DUSP16-201ENST00000228862 DIEXFQ68CQ4 756 aaKnown RBP19.26■□□□□ 0.67
DUSP16-201ENST00000228862 ITGAEP38570 1179 aa19.25■□□□□ 0.67
DUSP16-201ENST00000228862 PRXQ9BXM0 1461 aa19.23■□□□□ 0.67
DUSP16-201ENST00000228862 NESP48681 1621 aa19.23■□□□□ 0.67
DUSP16-201ENST00000228862 CUX2O14529 1486 aa19.23■□□□□ 0.67
DUSP16-201ENST00000228862 ATP1B4Q9UN42 357 aaPredicted RBP19.22■□□□□ 0.67
DUSP16-201ENST00000228862 P3H3Q8IVL6 736 aa19.21■□□□□ 0.67
DUSP16-201ENST00000228862 PRDM2Q13029 1718 aa19.18■□□□□ 0.66
DUSP16-201ENST00000228862 ARAP1Q96P48 1450 aa19.16■□□□□ 0.66
DUSP16-201ENST00000228862 FANCD2Q9BXW9 1451 aa19.16■□□□□ 0.66
DUSP16-201ENST00000228862 FGD5Q6ZNL6 1462 aa19.16■□□□□ 0.66
DUSP16-201ENST00000228862 ERICH3Q5RHP9 1530 aa19.13■□□□□ 0.65
DUSP16-201ENST00000228862 IGF1RP08069 1367 aa19.11■□□□□ 0.65
DUSP16-201ENST00000228862 PLPPR3Q6T4P5 718 aa19.1■□□□□ 0.65
DUSP16-201ENST00000228862 ZNF316A6NFI3 1004 aaPredicted RBP19.09■□□□□ 0.65
DUSP16-201ENST00000228862 CARMIL1Q5VZK9 1371 aa19.08■□□□□ 0.64
DUSP16-201ENST00000228862 RAD54L2Q9Y4B4 1467 aa19.08■□□□□ 0.64
DUSP16-201ENST00000228862 SCAF1Q9H7N4 1312 aaKnown RBP19.07■□□□□ 0.64
DUSP16-201ENST00000228862 YTHDC1Q96MU7 727 aaKnown RBP19.05■□□□□ 0.64
DUSP16-201ENST00000228862 ARHGAP35Q9NRY4 1499 aa19.05■□□□□ 0.64
DUSP16-201ENST00000228862 NEUROD1Q13562 356 aa18.99■□□□□ 0.63
DUSP16-201ENST00000228862 TOPBP1Q92547 1522 aa18.99■□□□□ 0.63
DUSP16-201ENST00000228862 POLA1P09884 1462 aaPredicted RBP18.97■□□□□ 0.63
DUSP16-201ENST00000228862 FAM50AQ14320 339 aaKnown RBP18.95■□□□□ 0.62
DUSP16-201ENST00000228862 DNMBPQ6XZF7 1577 aa18.94■□□□□ 0.62
DUSP16-201ENST00000228862 URB2Q14146 1524 aaKnown RBP18.91■□□□□ 0.62
DUSP16-201ENST00000228862 ACIN1Q9UKV3 1341 aaKnown RBP18.9■□□□□ 0.62
DUSP16-201ENST00000228862 CCNB3Q8WWL7 1395 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms