Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 MINOS1-206ENST00000485362 438 ntTSL 26.88□□□□□ -1.311e-6■□□□□ 8.6
SND1Q7KZF4 PKP4-204ENST00000421462 3099 ntTSL 218.75■□□□□ 0.599e-9■□□□□ 8.6
SND1Q7KZF4 PKP4-205ENST00000426248 4134 ntTSL 1 (best)17.73■□□□□ 0.439e-9■□□□□ 8.6
SND1Q7KZF4 PKP4-206ENST00000452162 2359 ntTSL 1 (best)11.46□□□□□ -0.589e-9■□□□□ 8.6
SND1Q7KZF4 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.619e-9■□□□□ 8.6
SND1Q7KZF4 PKP4-203ENST00000411900 552 ntTSL 410.34□□□□□ -0.759e-9■□□□□ 8.6
SND1Q7KZF4 PKP4-208ENST00000462335 561 ntTSL 410.02□□□□□ -0.819e-9■□□□□ 8.6
SND1Q7KZF4 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.859e-9■□□□□ 8.6
SND1Q7KZF4 PKP4-207ENST00000457109 520 ntTSL 39.13□□□□□ -0.959e-9■□□□□ 8.6
SND1Q7KZF4 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC8.23□□□□□ -1.099e-9■□□□□ 8.6
SND1Q7KZF4 FBLN1-209ENST00000445110 512 ntTSL 419.94■□□□□ 0.782e-9■□□□□ 8.6
SND1Q7KZF4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.25■□□□□ 0.034e-18■□□□□ 8.6
SND1Q7KZF4 SARS-203ENST00000468588 1582 ntTSL 27.17□□□□□ -1.264e-10■□□□□ 8.6
SND1Q7KZF4 ATP5J2-PTCD1-202ENST00000437572 544 ntTSL 417.33■□□□□ 0.361e-25■□□□□ 8.6
SND1Q7KZF4 ATP5J2-PTCD1-203ENST00000451138 331 ntTSL 416.67■□□□□ 0.261e-25■□□□□ 8.6
SND1Q7KZF4 PTCD1-204ENST00000430982 571 ntTSL 415.74■□□□□ 0.111e-25■□□□□ 8.6
SND1Q7KZF4 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.061e-25■□□□□ 8.6
SND1Q7KZF4 ATP5J2-206ENST00000466753 774 ntTSL 213.6□□□□□ -0.231e-25■□□□□ 8.6
SND1Q7KZF4 ATP5J2-211ENST00000523680 84 ntTSL 311.4□□□□□ -0.581e-25■□□□□ 8.6
SND1Q7KZF4 ATP5J2-204ENST00000414062 541 ntTSL 410.65□□□□□ -0.71e-25■□□□□ 8.6
SND1Q7KZF4 ATP5J2-202ENST00000359832 323 ntTSL 2 BASIC9.18□□□□□ -0.941e-25■□□□□ 8.6
SND1Q7KZF4 ATP5J2-207ENST00000481899 738 ntTSL 28.66□□□□□ -1.021e-25■□□□□ 8.6
SND1Q7KZF4 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.071e-25■□□□□ 8.6
SND1Q7KZF4 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC7.75□□□□□ -1.171e-25■□□□□ 8.6
SND1Q7KZF4 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.84□□□□□ -1.311e-25■□□□□ 8.6
SND1Q7KZF4 ATP5J2-210ENST00000491560 658 ntTSL 26.05□□□□□ -1.441e-25■□□□□ 8.6
SND1Q7KZF4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.39□□□□□ -1.711e-25■□□□□ 8.6
SND1Q7KZF4 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.331e-16■□□□□ 8.5
SND1Q7KZF4 RPL38-206ENST00000533498 532 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.481e-16■□□□□ 8.5
SND1Q7KZF4 RPL38-201ENST00000311111 1170 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.551e-16■□□□□ 8.5
SND1Q7KZF4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.78□□□□□ -1.641e-16■□□□□ 8.5
SND1Q7KZF4 TMEM208-208ENST00000564087 518 ntTSL 515.78■□□□□ 0.121e-6■□□□□ 8.5
SND1Q7KZF4 SLC6A6-206ENST00000615188 689 ntTSL 317.23■□□□□ 0.354e-7■□□□□ 8.5
SND1Q7KZF4 ITIH3-203ENST00000463893 529 ntTSL 48.56□□□□□ -1.044e-12■□□□□ 8.5
SND1Q7KZF4 CCT8-210ENST00000496121 1326 ntTSL 28.77□□□□□ -1.012e-9■□□□□ 8.5
SND1Q7KZF4 CCT8-205ENST00000475205 431 ntTSL 27.08□□□□□ -1.282e-9■□□□□ 8.5
SND1Q7KZF4 CCT8-206ENST00000480359 452 ntTSL 26.31□□□□□ -1.42e-9■□□□□ 8.5
SND1Q7KZF4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.111e-7■□□□□ 8.5
SND1Q7KZF4 YIPF2-208ENST00000589971 879 ntTSL 221.17■□□□□ 0.981e-7■□□□□ 8.5
SND1Q7KZF4 YIPF2-203ENST00000586575 932 ntTSL 520.65■□□□□ 0.91e-7■□□□□ 8.5
SND1Q7KZF4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.12■□□□□ 0.651e-7■□□□□ 8.5
SND1Q7KZF4 YIPF2-212ENST00000592646 950 ntTSL 318.42■□□□□ 0.541e-7■□□□□ 8.5
SND1Q7KZF4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.491e-7■□□□□ 8.5
SND1Q7KZF4 SRSF7-203ENST00000415527 1135 ntTSL 514.98□□□□□ -0.011e-7■□□□□ 8.5
SND1Q7KZF4 NLRP1-205ENST00000544378 5281 ntTSL 214.76□□□□□ -0.051e-7■□□□□ 8.5
SND1Q7KZF4 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.141e-7■□□□□ 8.5
SND1Q7KZF4 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.21e-7■□□□□ 8.5
SND1Q7KZF4 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.241e-7■□□□□ 8.5
SND1Q7KZF4 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.31e-7■□□□□ 8.5
SND1Q7KZF4 YIPF2-210ENST00000591872 430 ntTSL 213.08□□□□□ -0.321e-7■□□□□ 8.5
SND1Q7KZF4 NLRP1-201ENST00000262467 5131 ntTSL 5 BASIC12.45□□□□□ -0.421e-7■□□□□ 8.5
SND1Q7KZF4 SRSF7-201ENST00000313117 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51e-7■□□□□ 8.5
SND1Q7KZF4 SRSF7-206ENST00000431066 1847 ntTSL 511.42□□□□□ -0.581e-7■□□□□ 8.5
SND1Q7KZF4 SRSF7-209ENST00000446327 2453 ntTSL 2 BASIC11.35□□□□□ -0.591e-7■□□□□ 8.5
SND1Q7KZF4 NLRP1-215ENST00000613500 4494 ntTSL 5 BASIC11.19□□□□□ -0.621e-7■□□□□ 8.5
SND1Q7KZF4 NLRP1-203ENST00000345221 4656 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.631e-7■□□□□ 8.5
SND1Q7KZF4 NLRP1-217ENST00000619223 4698 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.631e-7■□□□□ 8.5
SND1Q7KZF4 SRSF7-208ENST00000443213 1903 ntTSL 511.02□□□□□ -0.651e-7■□□□□ 8.5
SND1Q7KZF4 NLRP1-216ENST00000617618 4788 ntAPPRIS P4 TSL 5 BASIC11.01□□□□□ -0.651e-7■□□□□ 8.5
SND1Q7KZF4 NLRP1-214ENST00000577119 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.711e-7■□□□□ 8.5
SND1Q7KZF4 SRSF7-205ENST00000425941 1944 ntTSL 510.35□□□□□ -0.751e-7■□□□□ 8.5
SND1Q7KZF4 NLRP1-210ENST00000572272 4422 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.751e-7■□□□□ 8.5
SND1Q7KZF4 NLRP1-204ENST00000354411 4332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.771e-7■□□□□ 8.5
SND1Q7KZF4 NLRP1-207ENST00000571307 4050 ntTSL 1 (best)10.23□□□□□ -0.771e-7■□□□□ 8.5
SND1Q7KZF4 SRSF7-204ENST00000425778 2857 ntTSL 29.74□□□□□ -0.851e-7■□□□□ 8.5
SND1Q7KZF4 SLC43A3-226ENST00000625097 1796 nt9.09□□□□□ -0.956e-27■□□□□ 8.5
SND1Q7KZF4 TMEM56-RWDD3-201ENST00000604203 680 ntTSL 38.66□□□□□ -1.021e-7■□□□□ 8.5
SND1Q7KZF4 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.75□□□□□ -1.171e-7■□□□□ 8.5
SND1Q7KZF4 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.049e-9■□□□□ 8.5
SND1Q7KZF4 MKRN1-209ENST00000475010 3467 ntTSL 215.19■□□□□ 0.029e-9■□□□□ 8.5
SND1Q7KZF4 AL049796.1-201ENST00000565336 1766 ntBASIC22.03■■□□□ 1.121e-7■□□□□ 8.5
SND1Q7KZF4 CHID1-218ENST00000531010 408 ntTSL 220.21■□□□□ 0.831e-7■□□□□ 8.5
SND1Q7KZF4 CHID1-214ENST00000528534 321 ntTSL 313.85□□□□□ -0.191e-7■□□□□ 8.5
SND1Q7KZF4 CHID1-213ENST00000528521 323 ntTSL 510.04□□□□□ -0.81e-7■□□□□ 8.5
SND1Q7KZF4 MCM7-212ENST00000493352 533 ntTSL 213.57□□□□□ -0.246e-13■□□□□ 8.5
SND1Q7KZF4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.94■■□□□ 1.12e-7■□□□□ 8.5
SND1Q7KZF4 KHDRBS1-203ENST00000484270 1989 ntTSL 520.68■□□□□ 0.98e-7■□□□□ 8.5
SND1Q7KZF4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.58■□□□□ 0.898e-7■□□□□ 8.5
SND1Q7KZF4 KHDRBS1-201ENST00000307714 2738 ntTSL 1 (best)20.33■□□□□ 0.858e-7■□□□□ 8.5
SND1Q7KZF4 FASN-202ENST00000578424 951 ntTSL 218.78■□□□□ 0.69e-9■□□□□ 8.5
SND1Q7KZF4 FASN-204ENST00000580382 681 ntTSL 317.91■□□□□ 0.469e-9■□□□□ 8.5
SND1Q7KZF4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.448e-7■□□□□ 8.5
SND1Q7KZF4 ATP13A1-213ENST00000497156 715 ntTSL 217.29■□□□□ 0.369e-7■□□□□ 8.5
SND1Q7KZF4 LAMA5-214ENST00000497363 579 ntTSL 317.02■□□□□ 0.324e-10■□□□□ 8.5
SND1Q7KZF4 ACTN1-211ENST00000553882 2636 ntTSL 216.05■□□□□ 0.169e-7■□□□□ 8.5
SND1Q7KZF4 COL4A5-203ENST00000470339 782 ntTSL 315.77■□□□□ 0.129e-7■□□□□ 8.5
SND1Q7KZF4 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC14.68□□□□□ -0.069e-7■□□□□ 8.5
SND1Q7KZF4 ALG3-211ENST00000477959 538 ntTSL 413.38□□□□□ -0.279e-7■□□□□ 8.5
SND1Q7KZF4 ATP13A1-215ENST00000497762 575 ntTSL 212.61□□□□□ -0.399e-7■□□□□ 8.5
SND1Q7KZF4 ACTN1-214ENST00000555075 828 ntTSL 312.61□□□□□ -0.399e-7■□□□□ 8.5
SND1Q7KZF4 ATP13A1-212ENST00000496082 698 ntTSL 412.28□□□□□ -0.449e-7■□□□□ 8.5
SND1Q7KZF4 ACTN1-216ENST00000556083 4674 ntTSL 1 (best)11.84□□□□□ -0.519e-7■□□□□ 8.5
SND1Q7KZF4 FREM1-206ENST00000466679 741 ntTSL 311.54□□□□□ -0.569e-9■□□□□ 8.5
SND1Q7KZF4 TMEM245-203ENST00000472207 3261 ntTSL 210.48□□□□□ -0.732e-7■□□□□ 8.5
SND1Q7KZF4 FREM1-207ENST00000485068 699 ntTSL 39.36□□□□□ -0.919e-9■□□□□ 8.5
SND1Q7KZF4 FAT1-205ENST00000507662 428 ntTSL 59.35□□□□□ -0.919e-9■□□□□ 8.5
SND1Q7KZF4 TMEM245-205ENST00000491854 2435 ntTSL 28.59□□□□□ -1.032e-7■□□□□ 8.5
SND1Q7KZF4 TMEM245-202ENST00000413712 1973 ntTSL 28.25□□□□□ -1.092e-7■□□□□ 8.5
SND1Q7KZF4 FREM1-208ENST00000486223 815 ntTSL 35.91□□□□□ -1.469e-9■□□□□ 8.5
SND1Q7KZF4 TMEM39A-208ENST00000486159 826 ntTSL 39.56□□□□□ -0.882e-7■□□□□ 8.5
Retrieved 100 of 13,567 protein–RNA pairs in 319.2 ms