RNA–Protein interactions for RNA: ENST00000531010.1

CHID1-218, Transcript of chitinase domain containing 1, humanhuman

TSL 2

Gene CHID1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-218ENST00000531010 NISCHQ9Y2I1 1504 aa46.72■■■■■ 5.07
CHID1-218ENST00000531010 CCDC180Q9P1Z9 1646 aa41.29■■■■■ 4.2
CHID1-218ENST00000531010 ABCC9O60706 1549 aa39.91■■■■□ 3.98
CHID1-218ENST00000531010 ZCCHC6Q5VYS8 1495 aaKnown RBP39.05■■■■□ 3.84
CHID1-218ENST00000531010 DCAF8L2P0C7V8 631 aa38.71■■■■□ 3.79
CHID1-218ENST00000531010 NACADO15069 1562 aa38.61■■■■□ 3.77
CHID1-218ENST00000531010 DCAF1Q9Y4B6 1507 aa38.61■■■■□ 3.77
CHID1-218ENST00000531010 RB1CC1Q8TDY2 1594 aa38.54■■■■□ 3.76
CHID1-218ENST00000531010 MYO15BQ96JP2 1530 aa38.52■■■■□ 3.76
CHID1-218ENST00000531010 UNC13AQ9UPW8 1703 aa37.93■■■■□ 3.66
CHID1-218ENST00000531010 SCRIBQ14160 1630 aa37.82■■■■□ 3.64
CHID1-218ENST00000531010 BICRAQ9NZM4 1560 aa37.53■■■■□ 3.6
CHID1-218ENST00000531010 PABPN1Q86U42 306 aaKnown RBP eCLIP37.37■■■■□ 3.57
CHID1-218ENST00000531010 SHROOM4Q9ULL8 1493 aa37.33■■■■□ 3.57
CHID1-218ENST00000531010 CECR2Q9BXF3 1484 aa36.43■■■■□ 3.42
CHID1-218ENST00000531010 EIF4G1Q04637 1599 aaKnown RBP36.4■■■■□ 3.42
CHID1-218ENST00000531010 DNAJC5BQ9UF47 199 aa36.19■■■■□ 3.38
CHID1-218ENST00000531010 SMARCA4P51532 1647 aa36.18■■■■□ 3.38
CHID1-218ENST00000531010 CC2D2AQ9P2K1 1620 aa36.15■■■■□ 3.38
CHID1-218ENST00000531010 BAZ1AQ9NRL2 1556 aaPredicted RBP36.12■■■■□ 3.37
CHID1-218ENST00000531010 MROH2BQ7Z745 1585 aa36.1■■■■□ 3.37
CHID1-218ENST00000531010 RSF1Q96T23 1441 aaPredicted RBP35.82■■■■□ 3.32
CHID1-218ENST00000531010 ATAD2BQ9ULI0 1458 aa35.79■■■■□ 3.32
CHID1-218ENST00000531010 WIZO95785 1651 aa35.78■■■■□ 3.32
CHID1-218ENST00000531010 PEG3Q9GZU2 1588 aa35.76■■■■□ 3.32
CHID1-218ENST00000531010 SMARCA2P51531 1590 aa35.71■■■■□ 3.31
CHID1-218ENST00000531010 NCAPD3P42695 1498 aa35.62■■■■□ 3.29
CHID1-218ENST00000531010 HMGXB3Q12766 1538 aa35.53■■■■□ 3.28
CHID1-218ENST00000531010 BAZ1BQ9UIG0 1483 aaKnown RBP35.48■■■■□ 3.27
CHID1-218ENST00000531010 TOP2AP11388 1531 aaKnown RBP35.32■■■■□ 3.25
CHID1-218ENST00000531010 SUPT5HO00267 1087 aaKnown RBP35.29■■■■□ 3.24
CHID1-218ENST00000531010 CCDC88BA6NC98 1476 aa34.92■■■■□ 3.18
CHID1-218ENST00000531010 NESP48681 1621 aa34.77■■■■□ 3.16
CHID1-218ENST00000531010 LAMC3Q9Y6N6 1575 aa34.62■■■■□ 3.13
CHID1-218ENST00000531010 CADPSQ9ULU8 1353 aa34.61■■■■□ 3.13
CHID1-218ENST00000531010 CFTRP13569 1480 aa34.56■■■■□ 3.12
CHID1-218ENST00000531010 PRDM2Q13029 1718 aa34.47■■■■□ 3.11
CHID1-218ENST00000531010 KIF21AQ7Z4S6 1674 aa34.41■■■■□ 3.1
CHID1-218ENST00000531010 PDS5BQ9NTI5 1447 aa34.27■■■■□ 3.08
CHID1-218ENST00000531010 FANCD2Q9BXW9 1451 aa34.27■■■■□ 3.08
CHID1-218ENST00000531010 ERCC6Q03468 1493 aa34.24■■■■□ 3.07
CHID1-218ENST00000531010 CEP164Q9UPV0 1460 aa34.14■■■■□ 3.06
CHID1-218ENST00000531010 THOC2Q8NI27 1593 aaKnown RBP34.11■■■■□ 3.05
CHID1-218ENST00000531010 MRC2Q9UBG0 1479 aa33.99■■■■□ 3.03
CHID1-218ENST00000531010 URB2Q14146 1524 aaKnown RBP33.97■■■■□ 3.03
CHID1-218ENST00000531010 ABCC8Q09428 1581 aa33.91■■■■□ 3.02
CHID1-218ENST00000531010 WDR62O43379 1518 aa33.9■■■■□ 3.02
CHID1-218ENST00000531010 CUX1P39880 1505 aa33.83■■■■□ 3.01
CHID1-218ENST00000531010 DNMBPQ6XZF7 1577 aa33.81■■■■□ 3
CHID1-218ENST00000531010 TOPBP1Q92547 1522 aa33.81■■■■□ 3
CHID1-218ENST00000531010 SYNJ1O43426 1573 aa33.74■■■□□ 2.99
CHID1-218ENST00000531010 WRNQ14191 1432 aaPredicted RBP eCLIP33.7■■■□□ 2.98
CHID1-218ENST00000531010 CUX2O14529 1486 aa33.66■■■□□ 2.98
CHID1-218ENST00000531010 BIVM-ERCC5R4GMW8 1640 aa33.66■■■□□ 2.98
CHID1-218ENST00000531010 TOP2BQ02880 1626 aa33.63■■■□□ 2.97
CHID1-218ENST00000531010 FGD5Q6ZNL6 1462 aa33.57■■■□□ 2.97
CHID1-218ENST00000531010 POLA1P09884 1462 aaPredicted RBP33.56■■■□□ 2.96
CHID1-218ENST00000531010 RAD54L2Q9Y4B4 1467 aa33.46■■■□□ 2.95
CHID1-218ENST00000531010 TARBP1Q13395 1621 aaKnown RBP33.46■■■□□ 2.95
CHID1-218ENST00000531010 WDR97A6NE52 1622 aa33.38■■■□□ 2.93
CHID1-218ENST00000531010 IFT140Q96RY7 1462 aa33.37■■■□□ 2.93
CHID1-218ENST00000531010 SOGA1O94964 1423 aa33.36■■■□□ 2.93
CHID1-218ENST00000531010 ZNF608Q9ULD9 1512 aaPredicted RBP33.33■■■□□ 2.93
CHID1-218ENST00000531010 CHIC1Q5VXU3 224 aa33.28■■■□□ 2.92
CHID1-218ENST00000531010 ABCA10Q8WWZ4 1543 aa33.23■■■□□ 2.91
CHID1-218ENST00000531010 EIF4G3O43432 1585 aaKnown RBP33.21■■■□□ 2.91
CHID1-218ENST00000531010 TRIM41Q8WV44 630 aa33.21■■■□□ 2.91
CHID1-218ENST00000531010 TDRD9Q8NDG6 1382 aaKnown RBP33.16■■■□□ 2.9
CHID1-218ENST00000531010 AQRO60306 1485 aaKnown RBP eCLIP33.15■■■□□ 2.9
CHID1-218ENST00000531010 ABCA5Q8WWZ7 1642 aa33.13■■■□□ 2.89
CHID1-218ENST00000531010 PBRM1Q86U86 1689 aa33.04■■■□□ 2.88
CHID1-218ENST00000531010 GAPVD1Q14C86 1478 aa33■■■□□ 2.87
CHID1-218ENST00000531010 RUSC2Q8N2Y8 1516 aa33■■■□□ 2.87
CHID1-218ENST00000531010 GRIN2BQ13224 1484 aa32.9■■■□□ 2.86
CHID1-218ENST00000531010 KIF27Q86VH2 1401 aa32.89■■■□□ 2.86
CHID1-218ENST00000531010 SNAPC4Q5SXM2 1469 aa32.86■■■□□ 2.85
CHID1-218ENST00000531010 ERICH3Q5RHP9 1530 aa32.82■■■□□ 2.84
CHID1-218ENST00000531010 ADAMTS12P58397 1594 aa32.77■■■□□ 2.84
CHID1-218ENST00000531010 IGF1RP08069 1367 aa32.76■■■□□ 2.83
CHID1-218ENST00000531010 MAGI1Q96QZ7 1491 aaPredicted RBP32.74■■■□□ 2.83
CHID1-218ENST00000531010 CHD1O14646 1710 aa32.74■■■□□ 2.83
CHID1-218ENST00000531010 CUL7Q14999 1698 aa32.66■■■□□ 2.82
CHID1-218ENST00000531010 FAM9AQ8IZU1 332 aaPredicted RBP32.64■■■□□ 2.82
CHID1-218ENST00000531010 SYNJ2O15056 1496 aa32.63■■■□□ 2.81
CHID1-218ENST00000531010 FHAD1B1AJZ9 1412 aa32.61■■■□□ 2.81
CHID1-218ENST00000531010 EEA1Q15075 1411 aa32.58■■■□□ 2.81
CHID1-218ENST00000531010 FBLN2P98095 1184 aa32.54■■■□□ 2.8
CHID1-218ENST00000531010 CARMIL1Q5VZK9 1371 aa32.54■■■□□ 2.8
CHID1-218ENST00000531010 GRIN2AQ12879 1464 aa32.53■■■□□ 2.8
CHID1-218ENST00000531010 CSRNP3Q8WYN3 585 aa32.5■■■□□ 2.79
CHID1-218ENST00000531010 PRXQ9BXM0 1461 aa32.49■■■□□ 2.79
CHID1-218ENST00000531010 CHMP7Q8WUX9 453 aaPredicted RBP32.49■■■□□ 2.79
CHID1-218ENST00000531010 CEP170Q5SW79 1584 aa32.44■■■□□ 2.78
CHID1-218ENST00000531010 RAPGEF2Q9Y4G8 1499 aa32.42■■■□□ 2.78
CHID1-218ENST00000531010 KIF21BO75037 1637 aa32.37■■■□□ 2.77
CHID1-218ENST00000531010 NUP160Q12769 1436 aa32.35■■■□□ 2.77
CHID1-218ENST00000531010 CLASP1Q7Z460 1538 aa32.33■■■□□ 2.77
CHID1-218ENST00000531010 OSCARQ8IYS5 282 aa32.3■■■□□ 2.76
CHID1-218ENST00000531010 EHMT2Q96KQ7 1210 aa32.24■■■□□ 2.75
CHID1-218ENST00000531010 CTTNBP2Q8WZ74 1663 aa32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms