RNA–Protein interactions for RNA: ENST00000486223.1

FREM1-208, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 3

Gene FREM1, Length 815 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-208ENST00000486223 AEBP2Q6ZN18 517 aaPredicted RBP23.87■■□□□ 1.41
FREM1-208ENST00000486223 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
FREM1-208ENST00000486223 SENP3Q9H4L4 574 aaPredicted RBP20.09■□□□□ 0.81
FREM1-208ENST00000486223 PHF23Q9BUL5 403 aaPredicted RBP19.99■□□□□ 0.79
FREM1-208ENST00000486223 FOXD1Q16676 465 aa18.87■□□□□ 0.61
FREM1-208ENST00000486223 PLPPR3Q6T4P5 718 aa18.02■□□□□ 0.48
FREM1-208ENST00000486223 PPP6R1Q9UPN7 881 aa17.83■□□□□ 0.44
FREM1-208ENST00000486223 ADRA2BP18089 450 aa17.7■□□□□ 0.42
FREM1-208ENST00000486223 PIAS4Q8N2W9 510 aaPredicted RBP17.53■□□□□ 0.4
FREM1-208ENST00000486223 MSH5O43196 834 aa17.42■□□□□ 0.38
FREM1-208ENST00000486223 POTEDQ86YR6 584 aa16.97■□□□□ 0.31
FREM1-208ENST00000486223 MAPK8IP2Q13387 824 aaPredicted RBP16.27■□□□□ 0.2
FREM1-208ENST00000486223 DMRT2Q9Y5R5 561 aa16.03■□□□□ 0.16
FREM1-208ENST00000486223 SCAF1Q9H7N4 1312 aaKnown RBP15.92■□□□□ 0.14
FREM1-208ENST00000486223 PPP4R3CPQ6ZMV5 832 aa15.89■□□□□ 0.13
FREM1-208ENST00000486223 HOXD11P31277 338 aaPredicted RBP15.5■□□□□ 0.07
FREM1-208ENST00000486223 CNKSR2Q8WXI2 1034 aa15.5■□□□□ 0.07
FREM1-208ENST00000486223 RNF216Q9NWF9 866 aaPredicted RBP15.36■□□□□ 0.05
FREM1-208ENST00000486223 DCAF8L1A6NGE4 600 aa15.22■□□□□ 0.03
FREM1-208ENST00000486223 NPM3O75607 178 aaKnown RBP15.14■□□□□ 0.01
FREM1-208ENST00000486223 NCBP3Q53F19 620 aaKnown RBP15.14■□□□□ 0.01
FREM1-208ENST00000486223 RNF39Q9H2S5 420 aa15.01□□□□□ -0.01
FREM1-208ENST00000486223 KCNA4P22459 653 aa14.97□□□□□ -0.01
FREM1-208ENST00000486223 CACNB1Q02641 598 aaPredicted RBP14.89□□□□□ -0.03
FREM1-208ENST00000486223 DNAJC5BQ9UF47 199 aa14.87□□□□□ -0.03
FREM1-208ENST00000486223 C1QBPQ07021 282 aaKnown RBP14.69□□□□□ -0.06
FREM1-208ENST00000486223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.63□□□□□ -0.071e-8■■□□□ 11.6
FREM1-208ENST00000486223 SLC4A2P04920 1241 aa14.51□□□□□ -0.09
FREM1-208ENST00000486223 U3KPZ7 1027 aaPredicted RBP14.5□□□□□ -0.09
FREM1-208ENST00000486223 SPINK5Q9NQ38 1064 aaPredicted RBP14.27□□□□□ -0.13
FREM1-208ENST00000486223 DSG3P32926 999 aa14.1□□□□□ -0.15
FREM1-208ENST00000486223 CAPN15O75808 1086 aa14.07□□□□□ -0.16
FREM1-208ENST00000486223 SLC4A1APQ9BWU0 796 aaKnown RBP14.04□□□□□ -0.16
FREM1-208ENST00000486223 TRHP20396 242 aaPredicted RBP13.9□□□□□ -0.18
FREM1-208ENST00000486223 ZBTB22O15209 634 aa13.88□□□□□ -0.19
FREM1-208ENST00000486223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.87□□□□□ -0.19
FREM1-208ENST00000486223 MYCNP04198 464 aaPredicted RBP13.87□□□□□ -0.19
FREM1-208ENST00000486223 HNRNPUL2Q1KMD3 747 aaKnown RBP13.87□□□□□ -0.19
FREM1-208ENST00000486223 SAMD1Q6SPF0 538 aaPredicted RBP13.86□□□□□ -0.19
FREM1-208ENST00000486223 ABCB7O75027 752 aa13.84□□□□□ -0.19
FREM1-208ENST00000486223 FOXD4L1Q9NU39 408 aa13.82□□□□□ -0.2
FREM1-208ENST00000486223 ZNF219Q9P2Y4 722 aaPredicted RBP13.81□□□□□ -0.2
FREM1-208ENST00000486223 APLP2Q06481 763 aa13.78□□□□□ -0.2
FREM1-208ENST00000486223 ATF5Q9Y2D1 282 aaPredicted RBP13.77□□□□□ -0.21
FREM1-208ENST00000486223 POLA2Q14181 598 aa13.6□□□□□ -0.23
FREM1-208ENST00000486223 ATXN8OSP0DMR3 200 aa13.36□□□□□ -0.27
FREM1-208ENST00000486223 CSRNP3Q8WYN3 585 aa13.27□□□□□ -0.29
FREM1-208ENST00000486223 POTEHQ6S545 545 aa13.26□□□□□ -0.29
FREM1-208ENST00000486223 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
FREM1-208ENST00000486223 OSCARQ8IYS5 282 aa13.18□□□□□ -0.3
FREM1-208ENST00000486223 ZBTB12Q9Y330 459 aaPredicted RBP13.16□□□□□ -0.3
FREM1-208ENST00000486223 MKRN4PQ13434 485 aaPredicted RBP13.12□□□□□ -0.31
FREM1-208ENST00000486223 AKT1S1Q96B36 256 aa13.06□□□□□ -0.32
FREM1-208ENST00000486223 CHRDL2Q6WN34 429 aa13.04□□□□□ -0.32
FREM1-208ENST00000486223 EHMT2Q96KQ7 1210 aa13.04□□□□□ -0.32
FREM1-208ENST00000486223 REM2Q8IYK8 340 aaPredicted RBP13.01□□□□□ -0.33
FREM1-208ENST00000486223 FBLN2P98095 1184 aa12.92□□□□□ -0.34
FREM1-208ENST00000486223 PITPNM1O00562 1244 aa12.88□□□□□ -0.35
FREM1-208ENST00000486223 SPDYE2BA6NHP3 402 aa12.86□□□□□ -0.35
FREM1-208ENST00000486223 SPDYE6P0CI01 402 aa12.86□□□□□ -0.35
FREM1-208ENST00000486223 SPDYE2Q495Y8 402 aa12.86□□□□□ -0.35
FREM1-208ENST00000486223 PIP4P2Q8N4L2 257 aa12.81□□□□□ -0.36
FREM1-208ENST00000486223 SSUH2Q9Y2M2 353 aa12.81□□□□□ -0.36
FREM1-208ENST00000486223 FXR2P51116 673 aaKnown RBP eCLIP12.76□□□□□ -0.37
FREM1-208ENST00000486223 ZNF692Q9BU19 519 aaPredicted RBP12.73□□□□□ -0.37
FREM1-208ENST00000486223 PABPN1Q86U42 306 aaKnown RBP eCLIP12.6□□□□□ -0.39
FREM1-208ENST00000486223 SPDYE1Q8NFV5 336 aaPredicted RBP12.59□□□□□ -0.39
FREM1-208ENST00000486223 CLEC11AQ9Y240 323 aa12.56□□□□□ -0.4
FREM1-208ENST00000486223 EVX2Q03828 476 aa12.54□□□□□ -0.4
FREM1-208ENST00000486223 PRKAR2AP13861 404 aaKnown RBP12.49□□□□□ -0.41
FREM1-208ENST00000486223 SP7Q8TDD2 431 aaPredicted RBP12.47□□□□□ -0.41
FREM1-208ENST00000486223 CHADLQ6NUI6 762 aa12.44□□□□□ -0.42
FREM1-208ENST00000486223 HAX1O00165 279 aa12.43□□□□□ -0.42
FREM1-208ENST00000486223 SPDYE4A6NLX3 237 aa12.39□□□□□ -0.43
FREM1-208ENST00000486223 PRR29P0C7W0 189 aa12.37□□□□□ -0.43
FREM1-208ENST00000486223 C19orf67A6NJJ6 358 aa12.34□□□□□ -0.43
FREM1-208ENST00000486223 CREBZFQ9NS37 354 aa12.25□□□□□ -0.45
FREM1-208ENST00000486223 PROM2Q8N271 834 aa12.24□□□□□ -0.45
FREM1-208ENST00000486223 FARP1Q9Y4F1 1045 aaPredicted RBP12.23□□□□□ -0.45
FREM1-208ENST00000486223 STAG3Q9UJ98 1225 aa12.13□□□□□ -0.47
FREM1-208ENST00000486223 GABBR2O75899 941 aa12.12□□□□□ -0.47
FREM1-208ENST00000486223 MNX1P50219 401 aaPredicted RBP12.11□□□□□ -0.47
FREM1-208ENST00000486223 CD44P16070 742 aaKnown RBP12.08□□□□□ -0.48
FREM1-208ENST00000486223 POTEIP0CG38 1075 aa11.99□□□□□ -0.49
FREM1-208ENST00000486223 ZNF579Q8NAF0 562 aaKnown RBP11.94□□□□□ -0.5
FREM1-208ENST00000486223 ZRANB1Q9UGI0 708 aa11.93□□□□□ -0.5
FREM1-208ENST00000486223 FKBP8Q14318 412 aa11.91□□□□□ -0.5
FREM1-208ENST00000486223 PHF12Q96QT6 1004 aa11.86□□□□□ -0.51
FREM1-208ENST00000486223 GALR2O43603 387 aaPredicted RBP11.85□□□□□ -0.51
FREM1-208ENST00000486223 NPM1P06748 294 aaKnown RBP eCLIP11.8□□□□□ -0.52
FREM1-208ENST00000486223 CLCN6P51797 869 aa11.77□□□□□ -0.53
FREM1-208ENST00000486223 MIER1Q8N108 512 aa11.76□□□□□ -0.53
FREM1-208ENST00000486223 RASEFQ8IZ41 740 aa11.73□□□□□ -0.53
FREM1-208ENST00000486223 CCDC61Q9Y6R9 512 aa11.73□□□□□ -0.53
FREM1-208ENST00000486223 TSPYL2Q9H2G4 693 aaPredicted RBP11.71□□□□□ -0.53
FREM1-208ENST00000486223 LHX8Q68G74 356 aa11.7□□□□□ -0.54
FREM1-208ENST00000486223 PAK3O75914 559 aaPredicted RBP11.69□□□□□ -0.54
FREM1-208ENST00000486223 PELP1Q8IZL8 1130 aaKnown RBP11.69□□□□□ -0.54
FREM1-208ENST00000486223 MS4A3Q96HJ5 214 aa11.69□□□□□ -0.54
FREM1-208ENST00000486223 NUBP1P53384 320 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms