RNA–Protein interactions for RNA: ENST00000255977.6

MKRN1-201, Transcript of makorin ring finger protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MKRN1, Length 3,151 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-201ENST00000255977 NISCHQ9Y2I1 1504 aa28.77■■■□□ 2.2
MKRN1-201ENST00000255977 CCDC180Q9P1Z9 1646 aa24.61■■□□□ 1.53
MKRN1-201ENST00000255977 ZCCHC6Q5VYS8 1495 aaKnown RBP24.36■■□□□ 1.49
MKRN1-201ENST00000255977 SHROOM4Q9ULL8 1493 aa24.16■■□□□ 1.46
MKRN1-201ENST00000255977 DCAF1Q9Y4B6 1507 aa23.82■■□□□ 1.4
MKRN1-201ENST00000255977 SUPT5HO00267 1087 aaKnown RBP23.77■■□□□ 1.4
MKRN1-201ENST00000255977 DCAF8L2P0C7V8 631 aa23.47■■□□□ 1.35
MKRN1-201ENST00000255977 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
MKRN1-201ENST00000255977 MYO15BQ96JP2 1530 aa23.16■■□□□ 1.3
MKRN1-201ENST00000255977 ABCC9O60706 1549 aa22.99■■□□□ 1.27
MKRN1-201ENST00000255977 SCRIBQ14160 1630 aa22.76■■□□□ 1.23
MKRN1-201ENST00000255977 RSF1Q96T23 1441 aaPredicted RBP22.72■■□□□ 1.23
MKRN1-201ENST00000255977 NACADO15069 1562 aa22.71■■□□□ 1.23
MKRN1-201ENST00000255977 HRCP23327 699 aa22.69■■□□□ 1.22
MKRN1-201ENST00000255977 RB1CC1Q8TDY2 1594 aa22.57■■□□□ 1.2
MKRN1-201ENST00000255977 PCGF6Q9BYE7 350 aa22.48■■□□□ 1.19
MKRN1-201ENST00000255977 LOC105371045A0A1W2PR82 267 aa22.42■■□□□ 1.18
MKRN1-201ENST00000255977 TRIM41Q8WV44 630 aa22.31■■□□□ 1.16
MKRN1-201ENST00000255977 TRIM26Q12899 539 aaPredicted RBP22.28■■□□□ 1.16
MKRN1-201ENST00000255977 CECR2Q9BXF3 1484 aa22.26■■□□□ 1.15
MKRN1-201ENST00000255977 MROH2BQ7Z745 1585 aa22.26■■□□□ 1.15
MKRN1-201ENST00000255977 BAZ1AQ9NRL2 1556 aaPredicted RBP22.14■■□□□ 1.14
MKRN1-201ENST00000255977 WIZO95785 1651 aa22.12■■□□□ 1.13
MKRN1-201ENST00000255977 ZEB1P37275 1124 aaPredicted RBP21.97■■□□□ 1.11
MKRN1-201ENST00000255977 EIF4G1Q04637 1599 aaKnown RBP21.96■■□□□ 1.11
MKRN1-201ENST00000255977 TOP2AP11388 1531 aaKnown RBP21.93■■□□□ 1.1
MKRN1-201ENST00000255977 PPARGC1BQ86YN6 1023 aaKnown RBP21.9■■□□□ 1.1
MKRN1-201ENST00000255977 SMARCA4P51532 1647 aa21.9■■□□□ 1.1
MKRN1-201ENST00000255977 FAM9AQ8IZU1 332 aaPredicted RBP21.89■■□□□ 1.1
MKRN1-201ENST00000255977 UNC13AQ9UPW8 1703 aa21.82■■□□□ 1.08
MKRN1-201ENST00000255977 SMARCA2P51531 1590 aa21.75■■□□□ 1.07
MKRN1-201ENST00000255977 CCDC88BA6NC98 1476 aa21.74■■□□□ 1.07
MKRN1-201ENST00000255977 EEA1Q15075 1411 aa21.63■■□□□ 1.05
MKRN1-201ENST00000255977 PEG3Q9GZU2 1588 aa21.6■■□□□ 1.05
MKRN1-201ENST00000255977 ABCC8Q09428 1581 aa21.56■■□□□ 1.04
MKRN1-201ENST00000255977 BICRAQ9NZM4 1560 aa21.56■■□□□ 1.04
MKRN1-201ENST00000255977 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
MKRN1-201ENST00000255977 EHMT2Q96KQ7 1210 aa21.51■■□□□ 1.03
MKRN1-201ENST00000255977 TNIKQ9UKE5 1360 aa21.49■■□□□ 1.03
MKRN1-201ENST00000255977 CEP162Q5TB80 1403 aa21.4■■□□□ 1.02
MKRN1-201ENST00000255977 CSRNP3Q8WYN3 585 aa21.4■■□□□ 1.02
MKRN1-201ENST00000255977 SOGA1O94964 1423 aa21.39■■□□□ 1.02
MKRN1-201ENST00000255977 GOLGA3Q08378 1498 aa21.34■■□□□ 1.01
MKRN1-201ENST00000255977 PABPN1Q86U42 306 aaKnown RBP eCLIP21.33■■□□□ 1.01
MKRN1-201ENST00000255977 ATAD2BQ9ULI0 1458 aa21.31■■□□□ 1
MKRN1-201ENST00000255977 KIF21BO75037 1637 aa21.24■□□□□ 0.99
MKRN1-201ENST00000255977 BAZ1BQ9UIG0 1483 aaKnown RBP21.24■□□□□ 0.99
MKRN1-201ENST00000255977 RUSC2Q8N2Y8 1516 aa21.24■□□□□ 0.99
MKRN1-201ENST00000255977 CEP164Q9UPV0 1460 aa21.24■□□□□ 0.99
MKRN1-201ENST00000255977 UBTFP17480 764 aaKnown RBP21.21■□□□□ 0.99
MKRN1-201ENST00000255977 CCER1Q8TC90 406 aaPredicted RBP21.21■□□□□ 0.99
MKRN1-201ENST00000255977 SYNJ1O43426 1573 aa21.19■□□□□ 0.98
MKRN1-201ENST00000255977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.14■□□□□ 0.97
MKRN1-201ENST00000255977 TOP2BQ02880 1626 aa21.05■□□□□ 0.96
MKRN1-201ENST00000255977 CLIP1P30622 1438 aa21.03■□□□□ 0.96
MKRN1-201ENST00000255977 BIVM-ERCC5R4GMW8 1640 aa21.01■□□□□ 0.95
MKRN1-201ENST00000255977 HMGXB3Q12766 1538 aa21■□□□□ 0.95
MKRN1-201ENST00000255977 VPS8Q8N3P4 1428 aa20.99■□□□□ 0.95
MKRN1-201ENST00000255977 NCAPD3P42695 1498 aa20.97■□□□□ 0.95
MKRN1-201ENST00000255977 ERICH3Q5RHP9 1530 aa20.93■□□□□ 0.94
MKRN1-201ENST00000255977 RAPGEF2Q9Y4G8 1499 aa20.91■□□□□ 0.94
MKRN1-201ENST00000255977 TTBK1Q5TCY1 1321 aaPredicted RBP20.88■□□□□ 0.93
MKRN1-201ENST00000255977 APLP2Q06481 763 aa20.87■□□□□ 0.93
MKRN1-201ENST00000255977 DIEXFQ68CQ4 756 aaKnown RBP20.84■□□□□ 0.93
MKRN1-201ENST00000255977 PRXQ9BXM0 1461 aa20.84■□□□□ 0.93
MKRN1-201ENST00000255977 SCAF1Q9H7N4 1312 aaKnown RBP20.77■□□□□ 0.92
MKRN1-201ENST00000255977 PELP1Q8IZL8 1130 aaKnown RBP20.77■□□□□ 0.92
MKRN1-201ENST00000255977 CFTRP13569 1480 aa20.77■□□□□ 0.92
MKRN1-201ENST00000255977 ZNF316A6NFI3 1004 aaPredicted RBP20.75■□□□□ 0.91
MKRN1-201ENST00000255977 KIF27Q86VH2 1401 aa20.75■□□□□ 0.91
MKRN1-201ENST00000255977 CUX1P39880 1505 aa20.75■□□□□ 0.91
MKRN1-201ENST00000255977 ACIN1Q9UKV3 1341 aaKnown RBP20.72■□□□□ 0.91
MKRN1-201ENST00000255977 CENPBP07199 599 aaPredicted RBP20.71■□□□□ 0.91
MKRN1-201ENST00000255977 PRDM2Q13029 1718 aa20.7■□□□□ 0.9
MKRN1-201ENST00000255977 CLSPNQ9HAW4 1339 aa20.67■□□□□ 0.9
MKRN1-201ENST00000255977 HNRNPUL2Q1KMD3 747 aaKnown RBP20.67■□□□□ 0.9
MKRN1-201ENST00000255977 ARAP1Q96P48 1450 aa20.67■□□□□ 0.9
MKRN1-201ENST00000255977 NEUROD1Q13562 356 aa20.56■□□□□ 0.88
MKRN1-201ENST00000255977 RRBP1Q9P2E9 1410 aaKnown RBP20.54■□□□□ 0.88
MKRN1-201ENST00000255977 CADPSQ9ULU8 1353 aa20.51■□□□□ 0.87
MKRN1-201ENST00000255977 RANGAP1P46060 587 aaPredicted RBP20.5■□□□□ 0.87
MKRN1-201ENST00000255977 ARHGAP35Q9NRY4 1499 aa20.49■□□□□ 0.87
MKRN1-201ENST00000255977 MAP3K1Q13233 1512 aa20.48■□□□□ 0.87
MKRN1-201ENST00000255977 CUX2O14529 1486 aa20.48■□□□□ 0.87
MKRN1-201ENST00000255977 IGF1RP08069 1367 aa20.45■□□□□ 0.86
MKRN1-201ENST00000255977 DHX57Q6P158 1386 aaKnown RBP20.44■□□□□ 0.86
MKRN1-201ENST00000255977 KANK4Q5T7N3 995 aaPredicted RBP20.43■□□□□ 0.86
MKRN1-201ENST00000255977 CCNB3Q8WWL7 1395 aa20.39■□□□□ 0.85
MKRN1-201ENST00000255977 CARMIL1Q5VZK9 1371 aa20.38■□□□□ 0.85
MKRN1-201ENST00000255977 GTF3C3Q9Y5Q9 886 aa20.38■□□□□ 0.85
MKRN1-201ENST00000255977 FGD5Q6ZNL6 1462 aa20.37■□□□□ 0.85
MKRN1-201ENST00000255977 TIAM1Q13009 1591 aa20.33■□□□□ 0.84
MKRN1-201ENST00000255977 FHAD1B1AJZ9 1412 aa20.31■□□□□ 0.84
MKRN1-201ENST00000255977 MIER1Q8N108 512 aa20.31■□□□□ 0.84
MKRN1-201ENST00000255977 CC2D2AQ9P2K1 1620 aa20.28■□□□□ 0.84
MKRN1-201ENST00000255977 DNMBPQ6XZF7 1577 aa20.27■□□□□ 0.83
MKRN1-201ENST00000255977 FANCD2Q9BXW9 1451 aa20.27■□□□□ 0.83
MKRN1-201ENST00000255977 LRRC9Q6ZRR7 1453 aa20.24■□□□□ 0.83
MKRN1-201ENST00000255977 ABCA10Q8WWZ4 1543 aa20.23■□□□□ 0.83
MKRN1-201ENST00000255977 CFAP43Q8NDM7 1665 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms