RNA–Protein interactions for RNA: ENST00000354411.7

NLRP1-204, Transcript of NLR family pyrin domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NLRP1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP1-204ENST00000354411 NISCHQ9Y2I1 1504 aa16.19■□□□□ 0.18
NLRP1-204ENST00000354411 DCAF8L2P0C7V8 631 aa15.75■□□□□ 0.11
NLRP1-204ENST00000354411 SUPT5HO00267 1087 aaKnown RBP15.57■□□□□ 0.08
NLRP1-204ENST00000354411 SHROOM4Q9ULL8 1493 aa15.48■□□□□ 0.07
NLRP1-204ENST00000354411 PELP1Q8IZL8 1130 aaKnown RBP15.08■□□□□ 0
NLRP1-204ENST00000354411 PCGF6Q9BYE7 350 aa14.93□□□□□ -0.02
NLRP1-204ENST00000354411 EHMT2Q96KQ7 1210 aa14.92□□□□□ -0.02
NLRP1-204ENST00000354411 MYT1Q01538 1121 aa14.88□□□□□ -0.03
NLRP1-204ENST00000354411 FAM9AQ8IZU1 332 aaPredicted RBP14.62□□□□□ -0.07
NLRP1-204ENST00000354411 PPARGC1BQ86YN6 1023 aaKnown RBP14.5□□□□□ -0.09
NLRP1-204ENST00000354411 HRCP23327 699 aa14.49□□□□□ -0.09
NLRP1-204ENST00000354411 TTBK1Q5TCY1 1321 aaPredicted RBP14.43□□□□□ -0.1
NLRP1-204ENST00000354411 LOC105371045A0A1W2PR82 267 aa14.42□□□□□ -0.1
NLRP1-204ENST00000354411 CHIC1Q5VXU3 224 aa14.41□□□□□ -0.1
NLRP1-204ENST00000354411 TRIM41Q8WV44 630 aa14.25□□□□□ -0.13
NLRP1-204ENST00000354411 ABCC9O60706 1549 aa14.2□□□□□ -0.14
NLRP1-204ENST00000354411 TRIM26Q12899 539 aaPredicted RBP14.16□□□□□ -0.14
NLRP1-204ENST00000354411 CCER1Q8TC90 406 aaPredicted RBP14.13□□□□□ -0.15
NLRP1-204ENST00000354411 ZEB1P37275 1124 aaPredicted RBP14.09□□□□□ -0.15
NLRP1-204ENST00000354411 RANGAP1P46060 587 aaPredicted RBP14.01□□□□□ -0.17
NLRP1-204ENST00000354411 YTHDC1Q96MU7 727 aaKnown RBP13.98□□□□□ -0.17
NLRP1-204ENST00000354411 PABPN1Q86U42 306 aaKnown RBP eCLIP13.96□□□□□ -0.17
NLRP1-204ENST00000354411 CENPBP07199 599 aaPredicted RBP13.93□□□□□ -0.18
NLRP1-204ENST00000354411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.89□□□□□ -0.19
NLRP1-204ENST00000354411 APLP2Q06481 763 aa13.87□□□□□ -0.19
NLRP1-204ENST00000354411 UBTFP17480 764 aaKnown RBP13.86□□□□□ -0.19
NLRP1-204ENST00000354411 MYO15BQ96JP2 1530 aa13.83□□□□□ -0.2
NLRP1-204ENST00000354411 ERICH6Q7L0X2 663 aa13.71□□□□□ -0.21
NLRP1-204ENST00000354411 HNRNPUL2Q1KMD3 747 aaKnown RBP13.68□□□□□ -0.22
NLRP1-204ENST00000354411 DIEXFQ68CQ4 756 aaKnown RBP13.67□□□□□ -0.22
NLRP1-204ENST00000354411 GTF3C3Q9Y5Q9 886 aa13.62□□□□□ -0.23
NLRP1-204ENST00000354411 ZCCHC6Q5VYS8 1495 aaKnown RBP13.54□□□□□ -0.24
NLRP1-204ENST00000354411 SCAF1Q9H7N4 1312 aaKnown RBP13.53□□□□□ -0.24
NLRP1-204ENST00000354411 ATP1B4Q9UN42 357 aaPredicted RBP13.52□□□□□ -0.25
NLRP1-204ENST00000354411 ITGAEP38570 1179 aa13.52□□□□□ -0.25
NLRP1-204ENST00000354411 DCAF1Q9Y4B6 1507 aa13.51□□□□□ -0.25
NLRP1-204ENST00000354411 ACIN1Q9UKV3 1341 aaKnown RBP13.48□□□□□ -0.25
NLRP1-204ENST00000354411 BCL11AQ9H165 835 aa13.47□□□□□ -0.25
NLRP1-204ENST00000354411 NEUROD1Q13562 356 aa13.45□□□□□ -0.26
NLRP1-204ENST00000354411 ZNF316A6NFI3 1004 aaPredicted RBP13.33□□□□□ -0.28
NLRP1-204ENST00000354411 PRKCSHP14314 528 aaPredicted RBP13.32□□□□□ -0.28
NLRP1-204ENST00000354411 NEFLP07196 543 aa13.29□□□□□ -0.28
NLRP1-204ENST00000354411 BCANQ96GW7 911 aa13.27□□□□□ -0.28
NLRP1-204ENST00000354411 SCRIBQ14160 1630 aa13.21□□□□□ -0.3
NLRP1-204ENST00000354411 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
NLRP1-204ENST00000354411 CNGB1Q14028 1251 aaPredicted RBP13.2□□□□□ -0.3
NLRP1-204ENST00000354411 MIER1Q8N108 512 aa13.17□□□□□ -0.3
NLRP1-204ENST00000354411 RSF1Q96T23 1441 aaPredicted RBP13.14□□□□□ -0.31
NLRP1-204ENST00000354411 FBLN2P98095 1184 aa13.11□□□□□ -0.31
NLRP1-204ENST00000354411 CCDC180Q9P1Z9 1646 aa13.11□□□□□ -0.31
NLRP1-204ENST00000354411 FAM50AQ14320 339 aaKnown RBP13.08□□□□□ -0.32
NLRP1-204ENST00000354411 POLR3GLQ9BT43 218 aa13.05□□□□□ -0.32
NLRP1-204ENST00000354411 P3H3Q8IVL6 736 aa12.97□□□□□ -0.33
NLRP1-204ENST00000354411 EIF5BO60841 1220 aaKnown RBP12.96□□□□□ -0.34
NLRP1-204ENST00000354411 ANP32EQ9BTT0 268 aa12.96□□□□□ -0.34
NLRP1-204ENST00000354411 DDX10Q13206 875 aaKnown RBP12.94□□□□□ -0.34
NLRP1-204ENST00000354411 HIRIP3Q9BW71 556 aaPredicted RBP12.94□□□□□ -0.34
NLRP1-204ENST00000354411 FKBP8Q14318 412 aa12.93□□□□□ -0.34
NLRP1-204ENST00000354411 CEP162Q5TB80 1403 aa12.93□□□□□ -0.34
NLRP1-204ENST00000354411 CECR2Q9BXF3 1484 aa12.92□□□□□ -0.34
NLRP1-204ENST00000354411 RB1CC1Q8TDY2 1594 aa12.89□□□□□ -0.35
NLRP1-204ENST00000354411 TRIM52Q96A61 297 aa12.89□□□□□ -0.35
NLRP1-204ENST00000354411 ANP32CO43423 234 aa12.88□□□□□ -0.35
NLRP1-204ENST00000354411 SLC24A1O60721 1099 aa12.86□□□□□ -0.35
NLRP1-204ENST00000354411 SOGA1O94964 1423 aa12.81□□□□□ -0.36
NLRP1-204ENST00000354411 CLIP1P30622 1438 aa12.81□□□□□ -0.36
NLRP1-204ENST00000354411 MYT1LQ9UL68 1186 aa12.79□□□□□ -0.36
NLRP1-204ENST00000354411 ARID3CA6NKF2 412 aa12.79□□□□□ -0.36
NLRP1-204ENST00000354411 IRX6P78412 446 aaPredicted RBP12.79□□□□□ -0.36
NLRP1-204ENST00000354411 DNAJC5BQ9UF47 199 aa12.78□□□□□ -0.36
NLRP1-204ENST00000354411 ZNF326Q5BKZ1 582 aaKnown RBP12.75□□□□□ -0.37
NLRP1-204ENST00000354411 TNIKQ9UKE5 1360 aa12.75□□□□□ -0.37
NLRP1-204ENST00000354411 CDK11AQ9UQ88 783 aaPredicted RBP12.75□□□□□ -0.37
NLRP1-204ENST00000354411 HNRNPUQ00839 825 aaKnown RBP eCLIP12.74□□□□□ -0.37
NLRP1-204ENST00000354411 SUPT16HQ9Y5B9 1047 aaKnown RBP12.73□□□□□ -0.37
NLRP1-204ENST00000354411 MROH2BQ7Z745 1585 aa12.73□□□□□ -0.37
NLRP1-204ENST00000354411 TRHP20396 242 aaPredicted RBP12.72□□□□□ -0.37
NLRP1-204ENST00000354411 RTL5Q5HYW3 569 aaPredicted RBP12.72□□□□□ -0.37
NLRP1-204ENST00000354411 ABCC8Q09428 1581 aa12.72□□□□□ -0.37
NLRP1-204ENST00000354411 CCDC88BA6NC98 1476 aa12.72□□□□□ -0.37
NLRP1-204ENST00000354411 GOLGA3Q08378 1498 aa12.69□□□□□ -0.38
NLRP1-204ENST00000354411 SIN3AQ96ST3 1273 aa12.69□□□□□ -0.38
NLRP1-204ENST00000354411 SENP3-EIF4A1A0A087X0R7 540 aa12.68□□□□□ -0.38
NLRP1-204ENST00000354411 FAM9BQ8IZU0 186 aa12.67□□□□□ -0.38
NLRP1-204ENST00000354411 WRNQ14191 1432 aaPredicted RBP eCLIP12.66□□□□□ -0.389e-6■■■■■ 50.1
NLRP1-204ENST00000354411 ERCC6Q03468 1493 aa12.64□□□□□ -0.39
NLRP1-204ENST00000354411 CCDC136Q96JN2 1154 aa12.64□□□□□ -0.39
NLRP1-204ENST00000354411 CHIC2Q9UKJ5 165 aa12.64□□□□□ -0.39
NLRP1-204ENST00000354411 CLSPNQ9HAW4 1339 aa12.64□□□□□ -0.39
NLRP1-204ENST00000354411 PLPPR3Q6T4P5 718 aa12.64□□□□□ -0.39
NLRP1-204ENST00000354411 TONSLQ96HA7 1378 aa12.63□□□□□ -0.39
NLRP1-204ENST00000354411 KANK4Q5T7N3 995 aaPredicted RBP12.62□□□□□ -0.39
NLRP1-204ENST00000354411 KCNH8Q96L42 1107 aa12.62□□□□□ -0.39
NLRP1-204ENST00000354411 GLIPR1L2Q4G1C9 344 aa12.61□□□□□ -0.39
NLRP1-204ENST00000354411 EEA1Q15075 1411 aa12.6□□□□□ -0.39
NLRP1-204ENST00000354411 RUSC2Q8N2Y8 1516 aa12.6□□□□□ -0.39
NLRP1-204ENST00000354411 DAXXQ9UER7 740 aaPredicted RBP12.59□□□□□ -0.39
NLRP1-204ENST00000354411 RTN4Q9NQC3 1192 aaKnown RBP12.58□□□□□ -0.39
NLRP1-204ENST00000354411 WIZO95785 1651 aa12.58□□□□□ -0.39
NLRP1-204ENST00000354411 SALL2Q9Y467 1007 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms