Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 LUC7L2-203ENST00000435096 570 ntTSL 317.61■□□□□ 0.414e-8■□□□□ 9.1
SRSF1Q07955 FTCD-210ENST00000488577 447 ntTSL 318.08■□□□□ 0.486e-7■□□□□ 9.1
SRSF1Q07955 FTCD-211ENST00000494498 840 ntTSL 318.08■□□□□ 0.486e-7■□□□□ 9.1
SRSF1Q07955 SLC22A31-205ENST00000603735 791 ntTSL 315.45■□□□□ 0.062e-21■□□□□ 9.1
SRSF1Q07955 C21orf59-206ENST00000440966 1082 ntTSL 317.88■□□□□ 0.452e-6■□□□□ 9.1
SRSF1Q07955 C21orf59-207ENST00000458138 863 ntTSL 316.47■□□□□ 0.232e-6■□□□□ 9.1
SRSF1Q07955 C21orf59-202ENST00000300260 1243 ntTSL 216.38■□□□□ 0.212e-6■□□□□ 9.1
SRSF1Q07955 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.082e-6■□□□□ 9.1
SRSF1Q07955 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.36■□□□□ 0.052e-6■□□□□ 9.1
SRSF1Q07955 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC10.66□□□□□ -0.72e-6■□□□□ 9.1
SRSF1Q07955 AP000275.2-201ENST00000431216 891 ntAPPRIS P1 TSL 59.53□□□□□ -0.882e-6■□□□□ 9.1
SRSF1Q07955 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.38■■□□□ 1.333e-6■□□□□ 9.1
SRSF1Q07955 CPNE1-205ENST00000401607 1795 ntTSL 520.99■□□□□ 0.953e-6■□□□□ 9.1
SRSF1Q07955 CPNE1-216ENST00000437340 1755 ntTSL 1 (best)20.77■□□□□ 0.923e-6■□□□□ 9.1
SRSF1Q07955 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.583e-6■□□□□ 9.1
SRSF1Q07955 CPNE1-204ENST00000397443 1928 ntAPPRIS P1 TSL 518.11■□□□□ 0.493e-6■□□□□ 9.1
SRSF1Q07955 CPNE1-224ENST00000483359 1975 ntTSL 515.89■□□□□ 0.133e-6■□□□□ 9.1
SRSF1Q07955 CPNE1-228ENST00000498814 550 ntTSL 314.07□□□□□ -0.163e-6■□□□□ 9.1
SRSF1Q07955 CPNE1-209ENST00000415920 731 ntTSL 513.06□□□□□ -0.323e-6■□□□□ 9.1
SRSF1Q07955 CPNE1-222ENST00000473373 821 ntTSL 211.05□□□□□ -0.643e-6■□□□□ 9.1
SRSF1Q07955 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC10.77□□□□□ -0.693e-6■□□□□ 9.1
SRSF1Q07955 CPNE1-221ENST00000462352 625 ntTSL 210.56□□□□□ -0.723e-6■□□□□ 9.1
SRSF1Q07955 CPNE1-225ENST00000483495 1853 ntTSL 510.52□□□□□ -0.733e-6■□□□□ 9.1
SRSF1Q07955 DUS1L-215ENST00000582529 1212 ntTSL 524.97■■□□□ 1.592e-9■□□□□ 9.1
SRSF1Q07955 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.43e-8■□□□□ 9.1
SRSF1Q07955 DDX23-208ENST00000551098 1083 ntTSL 216.47■□□□□ 0.233e-8■□□□□ 9.1
SRSF1Q07955 DDX23-218ENST00000553182 779 ntTSL 313.82□□□□□ -0.23e-8■□□□□ 9.1
SRSF1Q07955 DDX23-207ENST00000550834 869 ntTSL 512.01□□□□□ -0.493e-8■□□□□ 9.1
SRSF1Q07955 ATAD3B-205ENST00000485748 3233 ntTSL 211.74□□□□□ -0.533e-8■□□□□ 9.1
SRSF1Q07955 GSE1-212ENST00000562659 756 ntTSL 211.51□□□□□ -0.573e-8■□□□□ 9.1
SRSF1Q07955 HNRNPC-204ENST00000449098 1599 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.613e-8■□□□□ 9.1
SRSF1Q07955 ATAD3B-204ENST00000474481 3367 ntTSL 211.22□□□□□ -0.613e-8■□□□□ 9.1
SRSF1Q07955 DDX23-202ENST00000547135 1377 ntTSL 211.1□□□□□ -0.633e-8■□□□□ 9.1
SRSF1Q07955 ATAD3B-203ENST00000472194 4314 ntTSL 1 (best)9.35□□□□□ -0.913e-8■□□□□ 9.1
SRSF1Q07955 DDX23-209ENST00000551189 587 ntTSL 48.36□□□□□ -1.073e-8■□□□□ 9.1
SRSF1Q07955 DDX23-201ENST00000308025 3248 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.093e-8■□□□□ 9.1
SRSF1Q07955 DDX23-203ENST00000547165 958 ntTSL 56.76□□□□□ -1.333e-8■□□□□ 9.1
SRSF1Q07955 HNRNPC-210ENST00000554417 691 ntTSL 26.41□□□□□ -1.383e-8■□□□□ 9.1
SRSF1Q07955 HNRNPC-229ENST00000557157 698 ntTSL 54.52□□□□□ -1.693e-8■□□□□ 9.1
SRSF1Q07955 COL9A2-201ENST00000372736 319 ntTSL 321.28■■□□□ 13e-7■□□□□ 9.1
SRSF1Q07955 COL9A2-203ENST00000417105 677 ntTSL 521.08■□□□□ 0.973e-7■□□□□ 9.1
SRSF1Q07955 COL9A2-211ENST00000496215 668 ntTSL 519.4■□□□□ 0.73e-7■□□□□ 9.1
SRSF1Q07955 L3MBTL1-211ENST00000457824 582 ntTSL 318.41■□□□□ 0.543e-7■□□□□ 9.1
SRSF1Q07955 COL9A2-205ENST00000461118 1158 ntTSL 1 (best)18.15■□□□□ 0.53e-7■□□□□ 9.1
SRSF1Q07955 L3MBTL1-209ENST00000439769 460 ntTSL 417.34■□□□□ 0.373e-7■□□□□ 9.1
SRSF1Q07955 L3MBTL1-212ENST00000468336 751 ntTSL 217.12■□□□□ 0.333e-7■□□□□ 9.1
SRSF1Q07955 L3MBTL1-214ENST00000473289 590 ntTSL 216.37■□□□□ 0.213e-7■□□□□ 9.1
SRSF1Q07955 L3MBTL1-208ENST00000434666 573 ntTSL 415.55■□□□□ 0.083e-7■□□□□ 9.1
SRSF1Q07955 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.062e-9■□□□□ 9.1
SRSF1Q07955 L3MBTL1-207ENST00000430781 903 ntTSL 1 (best)14.47□□□□□ -0.093e-7■□□□□ 9.1
SRSF1Q07955 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.143e-7■□□□□ 9.1
SRSF1Q07955 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.142e-9■□□□□ 9.1
SRSF1Q07955 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.09□□□□□ -0.153e-7■□□□□ 9.1
SRSF1Q07955 TRAPPC12-203ENST00000411973 838 ntTSL 513.94□□□□□ -0.182e-9■□□□□ 9.1
SRSF1Q07955 TRAPPC12-210ENST00000441983 683 ntTSL 313.47□□□□□ -0.252e-9■□□□□ 9.1
SRSF1Q07955 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.653e-7■□□□□ 9.1
SRSF1Q07955 TRAPPC12-206ENST00000417243 1047 ntTSL 510.96□□□□□ -0.652e-9■□□□□ 9.1
SRSF1Q07955 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.693e-7■□□□□ 9.1
SRSF1Q07955 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.73e-7■□□□□ 9.1
SRSF1Q07955 TRAPPC12-212ENST00000457845 579 ntTSL 410.51□□□□□ -0.732e-9■□□□□ 9.1
SRSF1Q07955 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.813e-7■□□□□ 9.1
SRSF1Q07955 FUBP3-202ENST00000465949 676 ntTSL 54.21□□□□□ -1.743e-6■□□□□ 9.1
SRSF1Q07955 RAB17-208ENST00000430445 421 ntTSL 513.91□□□□□ -0.181e-8■□□□□ 9.1
SRSF1Q07955 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.33□□□□□ -0.283e-6■□□□□ 9
SRSF1Q07955 SCARB1-204ENST00000535005 1845 ntTSL 1 (best)10.67□□□□□ -0.73e-6■□□□□ 9
SRSF1Q07955 COBLL1-207ENST00000439313 565 ntTSL 514.99□□□□□ -0.011e-14■□□□□ 9
SRSF1Q07955 SETD5-207ENST00000415650 579 ntTSL 412.74□□□□□ -0.373e-7■□□□□ 9
SRSF1Q07955 SRSF11-209ENST00000463877 617 ntTSL 226.52■■□□□ 1.841e-9■□□□□ 9
SRSF1Q07955 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.38■■□□□ 1.815e-6■□□□□ 9
SRSF1Q07955 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.175e-6■□□□□ 9
SRSF1Q07955 SOCS2-209ENST00000549887 984 ntTSL 322.37■■□□□ 1.175e-6■□□□□ 9
SRSF1Q07955 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.131e-9■□□□□ 9
SRSF1Q07955 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.94■■□□□ 1.15e-6■□□□□ 9
SRSF1Q07955 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.895e-6■□□□□ 9
SRSF1Q07955 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.49■□□□□ 0.875e-6■□□□□ 9
SRSF1Q07955 SOCS2-204ENST00000548091 744 ntTSL 320.49■□□□□ 0.875e-6■□□□□ 9
SRSF1Q07955 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.87■□□□□ 0.771e-9■□□□□ 9
SRSF1Q07955 HNRNPDL-209ENST00000630114 1433 ntTSL 519.25■□□□□ 0.671e-9■□□□□ 9
SRSF1Q07955 GLUL-210ENST00000484996 1369 ntTSL 318.64■□□□□ 0.575e-6■□□□□ 9
SRSF1Q07955 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.515e-6■□□□□ 9
SRSF1Q07955 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.73■□□□□ 0.435e-6■□□□□ 9
SRSF1Q07955 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.415e-6■□□□□ 9
SRSF1Q07955 SOCS2-203ENST00000547229 462 ntTSL 217.48■□□□□ 0.395e-6■□□□□ 9
SRSF1Q07955 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.385e-6■□□□□ 9
SRSF1Q07955 ABCA7-206ENST00000525073 1918 ntTSL 216.81■□□□□ 0.285e-6■□□□□ 9
SRSF1Q07955 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.245e-6■□□□□ 9
SRSF1Q07955 SRSF11-210ENST00000469170 668 ntTSL 216.51■□□□□ 0.231e-9■□□□□ 9
SRSF1Q07955 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.235e-6■□□□□ 9
SRSF1Q07955 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.211e-9■□□□□ 9
SRSF1Q07955 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.94■□□□□ 0.145e-6■□□□□ 9
SRSF1Q07955 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.081e-9■□□□□ 9
SRSF1Q07955 HNRNPDL-203ENST00000502762 2356 ntTSL 1 (best)15.55■□□□□ 0.081e-9■□□□□ 9
SRSF1Q07955 SRRM2-217ENST00000573692 459 ntTSL 315.27■□□□□ 0.041e-9■□□□□ 9
SRSF1Q07955 HNRNPH1-240ENST00000521720 539 ntTSL 315.25■□□□□ 0.031e-9■□□□□ 9
SRSF1Q07955 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.025e-6■□□□□ 9
SRSF1Q07955 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -05e-6■□□□□ 9
SRSF1Q07955 HNRNPDL-202ENST00000349655 1402 ntTSL 1 (best)14.94□□□□□ -0.021e-9■□□□□ 9
SRSF1Q07955 ARHGEF2-208ENST00000470541 1877 ntTSL 314.91□□□□□ -0.025e-6■□□□□ 9
SRSF1Q07955 HNRNPDL-205ENST00000514511 1143 ntTSL 214.86□□□□□ -0.031e-9■□□□□ 9
SRSF1Q07955 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.59□□□□□ -0.075e-6■□□□□ 9
Retrieved 100 of 14,836 protein–RNA pairs in 310.6 ms