RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 NISCHQ9Y2I1 1504 aa50.78■■■■■ 5.72
COL9A2-211ENST00000496215 CCDC180Q9P1Z9 1646 aa45.33■■■■■ 4.85
COL9A2-211ENST00000496215 ABCC9O60706 1549 aa44.7■■■■■ 4.75
COL9A2-211ENST00000496215 RB1CC1Q8TDY2 1594 aa42.78■■■■■ 4.44
COL9A2-211ENST00000496215 NACADO15069 1562 aa42.64■■■■■ 4.42
COL9A2-211ENST00000496215 DCAF8L2P0C7V8 631 aa42.42■■■■■ 4.38
COL9A2-211ENST00000496215 MYO15BQ96JP2 1530 aa42.26■■■■■ 4.36
COL9A2-211ENST00000496215 ZCCHC6Q5VYS8 1495 aaKnown RBP42.25■■■■■ 4.35
COL9A2-211ENST00000496215 UNC13AQ9UPW8 1703 aa41.99■■■■■ 4.31
COL9A2-211ENST00000496215 DCAF1Q9Y4B6 1507 aa41.96■■■■■ 4.31
COL9A2-211ENST00000496215 PABPN1Q86U42 306 aaKnown RBP eCLIP41.68■■■■■ 4.268e-7■■■□□ 14.6
COL9A2-211ENST00000496215 BICRAQ9NZM4 1560 aa41.66■■■■■ 4.26
COL9A2-211ENST00000496215 DNAJC5BQ9UF47 199 aa41.44■■■■■ 4.22
COL9A2-211ENST00000496215 SCRIBQ14160 1630 aa41.36■■■■■ 4.21
COL9A2-211ENST00000496215 SHROOM4Q9ULL8 1493 aa41.01■■■■■ 4.16
COL9A2-211ENST00000496215 EIF4G1Q04637 1599 aaKnown RBP40.51■■■■■ 4.08
COL9A2-211ENST00000496215 CC2D2AQ9P2K1 1620 aa40.45■■■■■ 4.07
COL9A2-211ENST00000496215 CECR2Q9BXF3 1484 aa40.18■■■■■ 4.02
COL9A2-211ENST00000496215 SMARCA4P51532 1647 aa39.51■■■■□ 3.92
COL9A2-211ENST00000496215 NCAPD3P42695 1498 aa39.37■■■■□ 3.89
COL9A2-211ENST00000496215 ATAD2BQ9ULI0 1458 aa39.36■■■■□ 3.89
COL9A2-211ENST00000496215 BAZ1AQ9NRL2 1556 aaPredicted RBP39.34■■■■□ 3.89
COL9A2-211ENST00000496215 SMARCA2P51531 1590 aa39.24■■■■□ 3.87
COL9A2-211ENST00000496215 MROH2BQ7Z745 1585 aa39.18■■■■□ 3.86
COL9A2-211ENST00000496215 HMGXB3Q12766 1538 aa39.16■■■■□ 3.86
COL9A2-211ENST00000496215 PEG3Q9GZU2 1588 aa39.12■■■■□ 3.85
COL9A2-211ENST00000496215 BAZ1BQ9UIG0 1483 aaKnown RBP38.98■■■■□ 3.83
COL9A2-211ENST00000496215 WIZO95785 1651 aa38.76■■■■□ 3.8
COL9A2-211ENST00000496215 NESP48681 1621 aa38.64■■■■□ 3.78
COL9A2-211ENST00000496215 RSF1Q96T23 1441 aaPredicted RBP38.55■■■■□ 3.76
COL9A2-211ENST00000496215 ERCC6Q03468 1493 aa38.47■■■■□ 3.75
COL9A2-211ENST00000496215 LAMC3Q9Y6N6 1575 aa38.39■■■■□ 3.74
COL9A2-211ENST00000496215 TOP2AP11388 1531 aaKnown RBP38.27■■■■□ 3.72
COL9A2-211ENST00000496215 CUX2O14529 1486 aa38.22■■■■□ 3.71
COL9A2-211ENST00000496215 KIF21AQ7Z4S6 1674 aa38.18■■■■□ 3.7
COL9A2-211ENST00000496215 CADPSQ9ULU8 1353 aa38.17■■■■□ 3.7
COL9A2-211ENST00000496215 THOC2Q8NI27 1593 aaKnown RBP38.15■■■■□ 3.7
COL9A2-211ENST00000496215 PDS5BQ9NTI5 1447 aa38.06■■■■□ 3.68
COL9A2-211ENST00000496215 CFTRP13569 1480 aa37.9■■■■□ 3.66
COL9A2-211ENST00000496215 CCDC88BA6NC98 1476 aa37.81■■■■□ 3.64
COL9A2-211ENST00000496215 MRC2Q9UBG0 1479 aa37.77■■■■□ 3.64
COL9A2-211ENST00000496215 FANCD2Q9BXW9 1451 aa37.77■■■■□ 3.64
COL9A2-211ENST00000496215 CEP164Q9UPV0 1460 aa37.74■■■■□ 3.63
COL9A2-211ENST00000496215 DNAJC5Q9H3Z4 198 aa37.72■■■■□ 3.63
COL9A2-211ENST00000496215 WDR62O43379 1518 aa37.71■■■■□ 3.63
COL9A2-211ENST00000496215 PRDM2Q13029 1718 aa37.66■■■■□ 3.62
COL9A2-211ENST00000496215 URB2Q14146 1524 aaKnown RBP37.49■■■■□ 3.59
COL9A2-211ENST00000496215 SUPT5HO00267 1087 aaKnown RBP37.23■■■■□ 3.55
COL9A2-211ENST00000496215 TOPBP1Q92547 1522 aa37.15■■■■□ 3.54
COL9A2-211ENST00000496215 DNMBPQ6XZF7 1577 aa37.07■■■■□ 3.52
COL9A2-211ENST00000496215 ABCC8Q09428 1581 aa37■■■■□ 3.51
COL9A2-211ENST00000496215 IFT140Q96RY7 1462 aa36.95■■■■□ 3.51
COL9A2-211ENST00000496215 ZNF608Q9ULD9 1512 aaPredicted RBP36.92■■■■□ 3.5
COL9A2-211ENST00000496215 TARBP1Q13395 1621 aaKnown RBP36.83■■■■□ 3.49
COL9A2-211ENST00000496215 POLA1P09884 1462 aaPredicted RBP36.82■■■■□ 3.49
COL9A2-211ENST00000496215 CUX1P39880 1505 aa36.78■■■■□ 3.48
COL9A2-211ENST00000496215 EIF4G3O43432 1585 aaKnown RBP36.76■■■■□ 3.48
COL9A2-211ENST00000496215 RAD54L2Q9Y4B4 1467 aa36.68■■■■□ 3.46
COL9A2-211ENST00000496215 FGD5Q6ZNL6 1462 aa36.67■■■■□ 3.46
COL9A2-211ENST00000496215 AQRO60306 1485 aaKnown RBP eCLIP36.62■■■■□ 3.45
COL9A2-211ENST00000496215 SOGA1O94964 1423 aa36.59■■■■□ 3.45
COL9A2-211ENST00000496215 OSCARQ8IYS5 282 aa36.5■■■■□ 3.43
COL9A2-211ENST00000496215 WDR97A6NE52 1622 aa36.48■■■■□ 3.43
COL9A2-211ENST00000496215 TDRD9Q8NDG6 1382 aaKnown RBP36.47■■■■□ 3.43
COL9A2-211ENST00000496215 CHD1O14646 1710 aa36.39■■■■□ 3.42
COL9A2-211ENST00000496215 SYNJ1O43426 1573 aa36.36■■■■□ 3.41
COL9A2-211ENST00000496215 BIVM-ERCC5R4GMW8 1640 aa36.35■■■■□ 3.41
COL9A2-211ENST00000496215 TOP2BQ02880 1626 aa36.33■■■■□ 3.41
COL9A2-211ENST00000496215 WRNQ14191 1432 aaPredicted RBP eCLIP36.3■■■■□ 3.4
COL9A2-211ENST00000496215 SNAPC4Q5SXM2 1469 aa36.28■■■■□ 3.4
COL9A2-211ENST00000496215 ABCA10Q8WWZ4 1543 aa36.27■■■■□ 3.4
COL9A2-211ENST00000496215 ABCA5Q8WWZ7 1642 aa36.23■■■■□ 3.39
COL9A2-211ENST00000496215 PBRM1Q86U86 1689 aa36.22■■■■□ 3.39
COL9A2-211ENST00000496215 GRIN2BQ13224 1484 aa36.21■■■■□ 3.39
COL9A2-211ENST00000496215 GAPVD1Q14C86 1478 aa36.18■■■■□ 3.38
COL9A2-211ENST00000496215 MAGI1Q96QZ7 1491 aaPredicted RBP36.16■■■■□ 3.38
COL9A2-211ENST00000496215 RIMBP3CA6NJZ7 1639 aa36.13■■■■□ 3.37
COL9A2-211ENST00000496215 RIMBP3BA6NNM3 1639 aa36.13■■■■□ 3.37
COL9A2-211ENST00000496215 RIMBP3Q9UFD9 1639 aa36.13■■■■□ 3.37
COL9A2-211ENST00000496215 FBLN2P98095 1184 aa36.13■■■■□ 3.37
COL9A2-211ENST00000496215 TRIM41Q8WV44 630 aa36.07■■■■□ 3.36
COL9A2-211ENST00000496215 ARHGEF11O15085 1522 aa36.05■■■■□ 3.36
COL9A2-211ENST00000496215 SYNJ2O15056 1496 aa36.04■■■■□ 3.36
COL9A2-211ENST00000496215 CLASP1Q7Z460 1538 aa35.97■■■■□ 3.35
COL9A2-211ENST00000496215 CHMP7Q8WUX9 453 aaPredicted RBP35.95■■■■□ 3.35
COL9A2-211ENST00000496215 ADAMTS12P58397 1594 aa35.9■■■■□ 3.34
COL9A2-211ENST00000496215 ERICH3Q5RHP9 1530 aa35.81■■■■□ 3.32
COL9A2-211ENST00000496215 GRIN2AQ12879 1464 aa35.79■■■■□ 3.32
COL9A2-211ENST00000496215 ARAP1Q96P48 1450 aa35.77■■■■□ 3.32
COL9A2-211ENST00000496215 FHAD1B1AJZ9 1412 aa35.73■■■■□ 3.31
COL9A2-211ENST00000496215 CEP170Q5SW79 1584 aa35.7■■■■□ 3.31
COL9A2-211ENST00000496215 NUP160Q12769 1436 aa35.66■■■■□ 3.3
COL9A2-211ENST00000496215 CYB5RLQ6IPT4 315 aa35.63■■■■□ 3.29
COL9A2-211ENST00000496215 KIF27Q86VH2 1401 aa35.55■■■■□ 3.28
COL9A2-211ENST00000496215 ERCC6L2Q5T890 1561 aa35.51■■■■□ 3.27
COL9A2-211ENST00000496215 CUL7Q14999 1698 aa35.49■■■■□ 3.27
COL9A2-211ENST00000496215 IGF1RP08069 1367 aa35.49■■■■□ 3.27
COL9A2-211ENST00000496215 SHROOM2Q13796 1616 aa35.48■■■■□ 3.27
COL9A2-211ENST00000496215 RUSC2Q8N2Y8 1516 aa35.4■■■■□ 3.26
COL9A2-211ENST00000496215 CARMIL1Q5VZK9 1371 aa35.23■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 564.4 ms