RNA–Protein interactions for RNA: ENST00000463877.1

SRSF11-209, Transcript of serine and arginine rich splicing factor 11, humanhuman

TSL 2

Gene SRSF11, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF11-209ENST00000463877 NISCHQ9Y2I1 1504 aa69.38■■■■■ 8.7
SRSF11-209ENST00000463877 CCDC180Q9P1Z9 1646 aa61.81■■■■■ 7.49
SRSF11-209ENST00000463877 ABCC9O60706 1549 aa60.91■■■■■ 7.34
SRSF11-209ENST00000463877 RB1CC1Q8TDY2 1594 aa58.42■■■■■ 6.94
SRSF11-209ENST00000463877 DCAF8L2P0C7V8 631 aa58.38■■■■■ 6.94
SRSF11-209ENST00000463877 NACADO15069 1562 aa58.25■■■■■ 6.91
SRSF11-209ENST00000463877 MYO15BQ96JP2 1530 aa57.72■■■■■ 6.83
SRSF11-209ENST00000463877 ZCCHC6Q5VYS8 1495 aaKnown RBP57.67■■■■■ 6.82
SRSF11-209ENST00000463877 DCAF1Q9Y4B6 1507 aa57.35■■■■■ 6.77
SRSF11-209ENST00000463877 UNC13AQ9UPW8 1703 aa57.01■■■■■ 6.72
SRSF11-209ENST00000463877 PABPN1Q86U42 306 aaKnown RBP eCLIP56.92■■■■■ 6.7
SRSF11-209ENST00000463877 BICRAQ9NZM4 1560 aa56.56■■■■■ 6.65
SRSF11-209ENST00000463877 SCRIBQ14160 1630 aa56.42■■■■■ 6.62
SRSF11-209ENST00000463877 DNAJC5BQ9UF47 199 aa56.2■■■■■ 6.59
SRSF11-209ENST00000463877 SHROOM4Q9ULL8 1493 aa55.98■■■■■ 6.55
SRSF11-209ENST00000463877 EIF4G1Q04637 1599 aaKnown RBP55.16■■■■■ 6.42
SRSF11-209ENST00000463877 CC2D2AQ9P2K1 1620 aa55.04■■■■■ 6.4
SRSF11-209ENST00000463877 CECR2Q9BXF3 1484 aa54.77■■■■■ 6.36
SRSF11-209ENST00000463877 SMARCA4P51532 1647 aa53.9■■■■■ 6.22
SRSF11-209ENST00000463877 BAZ1AQ9NRL2 1556 aaPredicted RBP53.83■■■■■ 6.21
SRSF11-209ENST00000463877 NCAPD3P42695 1498 aa53.74■■■■■ 6.19
SRSF11-209ENST00000463877 ATAD2BQ9ULI0 1458 aa53.71■■■■■ 6.19
SRSF11-209ENST00000463877 SMARCA2P51531 1590 aa53.66■■■■■ 6.18
SRSF11-209ENST00000463877 MROH2BQ7Z745 1585 aa53.44■■■■■ 6.15
SRSF11-209ENST00000463877 HMGXB3Q12766 1538 aa53.42■■■■■ 6.14
SRSF11-209ENST00000463877 PEG3Q9GZU2 1588 aa53.33■■■■■ 6.13
SRSF11-209ENST00000463877 BAZ1BQ9UIG0 1483 aaKnown RBP53.31■■■■■ 6.12
SRSF11-209ENST00000463877 WIZO95785 1651 aa52.87■■■■■ 6.05
SRSF11-209ENST00000463877 RSF1Q96T23 1441 aaPredicted RBP52.73■■■■■ 6.03
SRSF11-209ENST00000463877 ERCC6Q03468 1493 aa52.6■■■■■ 6.01
SRSF11-209ENST00000463877 NESP48681 1621 aa52.56■■■■■ 6
SRSF11-209ENST00000463877 LAMC3Q9Y6N6 1575 aa52.39■■■■■ 5.98
SRSF11-209ENST00000463877 TOP2AP11388 1531 aaKnown RBP52.28■■■■■ 5.96
SRSF11-209ENST00000463877 CADPSQ9ULU8 1353 aa52.21■■■■■ 5.95
SRSF11-209ENST00000463877 PDS5BQ9NTI5 1447 aa52.13■■■■■ 5.94
SRSF11-209ENST00000463877 CUX2O14529 1486 aa52.09■■■■■ 5.93
SRSF11-209ENST00000463877 KIF21AQ7Z4S6 1674 aa51.92■■■■■ 5.9
SRSF11-209ENST00000463877 THOC2Q8NI27 1593 aaKnown RBP51.79■■■■■ 5.88
SRSF11-209ENST00000463877 CFTRP13569 1480 aa51.76■■■■■ 5.88
SRSF11-209ENST00000463877 CCDC88BA6NC98 1476 aa51.7■■■■■ 5.87
SRSF11-209ENST00000463877 FANCD2Q9BXW9 1451 aa51.59■■■■■ 5.85
SRSF11-209ENST00000463877 CEP164Q9UPV0 1460 aa51.58■■■■■ 5.85
SRSF11-209ENST00000463877 MRC2Q9UBG0 1479 aa51.55■■■■■ 5.84
SRSF11-209ENST00000463877 WDR62O43379 1518 aa51.34■■■■■ 5.81
SRSF11-209ENST00000463877 PRDM2Q13029 1718 aa51.33■■■■■ 5.81
SRSF11-209ENST00000463877 SUPT5HO00267 1087 aaKnown RBP51.31■■■■■ 5.8
SRSF11-209ENST00000463877 URB2Q14146 1524 aaKnown RBP51.05■■■■■ 5.76
SRSF11-209ENST00000463877 DNAJC5Q9H3Z4 198 aa50.97■■■■■ 5.75
SRSF11-209ENST00000463877 ABCC8Q09428 1581 aa50.75■■■■■ 5.71
SRSF11-209ENST00000463877 TOPBP1Q92547 1522 aa50.71■■■■■ 5.71
SRSF11-209ENST00000463877 DNMBPQ6XZF7 1577 aa50.61■■■■■ 5.69
SRSF11-209ENST00000463877 IFT140Q96RY7 1462 aa50.51■■■■■ 5.68
SRSF11-209ENST00000463877 ZNF608Q9ULD9 1512 aaPredicted RBP50.26■■■■■ 5.64
SRSF11-209ENST00000463877 POLA1P09884 1462 aaPredicted RBP50.24■■■■■ 5.63
SRSF11-209ENST00000463877 CUX1P39880 1505 aa50.16■■■■■ 5.62
SRSF11-209ENST00000463877 TARBP1Q13395 1621 aaKnown RBP50.13■■■■■ 5.62
SRSF11-209ENST00000463877 SOGA1O94964 1423 aa50.11■■■■■ 5.61
SRSF11-209ENST00000463877 FGD5Q6ZNL6 1462 aa50.09■■■■■ 5.61
SRSF11-209ENST00000463877 RAD54L2Q9Y4B4 1467 aa50.06■■■■■ 5.6
SRSF11-209ENST00000463877 EIF4G3O43432 1585 aaKnown RBP50.04■■■■■ 5.6
SRSF11-209ENST00000463877 OSCARQ8IYS5 282 aa50■■■■■ 5.59
SRSF11-209ENST00000463877 AQRO60306 1485 aaKnown RBP eCLIP49.99■■■■■ 5.593e-16■□□□□ 8.9
SRSF11-209ENST00000463877 TDRD9Q8NDG6 1382 aaKnown RBP49.86■■■■■ 5.57
SRSF11-209ENST00000463877 WRNQ14191 1432 aaPredicted RBP eCLIP49.77■■■■■ 5.56
SRSF11-209ENST00000463877 WDR97A6NE52 1622 aa49.74■■■■■ 5.55
SRSF11-209ENST00000463877 TOP2BQ02880 1626 aa49.64■■■■■ 5.54
SRSF11-209ENST00000463877 BIVM-ERCC5R4GMW8 1640 aa49.63■■■■■ 5.53
SRSF11-209ENST00000463877 FBLN2P98095 1184 aa49.61■■■■■ 5.53
SRSF11-209ENST00000463877 SYNJ1O43426 1573 aa49.59■■■■■ 5.53
SRSF11-209ENST00000463877 ABCA10Q8WWZ4 1543 aa49.56■■■■■ 5.52
SRSF11-209ENST00000463877 GRIN2BQ13224 1484 aa49.54■■■■■ 5.52
SRSF11-209ENST00000463877 GAPVD1Q14C86 1478 aa49.5■■■■■ 5.52
SRSF11-209ENST00000463877 CHD1O14646 1710 aa49.5■■■■■ 5.51
SRSF11-209ENST00000463877 SNAPC4Q5SXM2 1469 aa49.5■■■■■ 5.51
SRSF11-209ENST00000463877 MAGI1Q96QZ7 1491 aaPredicted RBP49.42■■■■■ 5.5
SRSF11-209ENST00000463877 CHMP7Q8WUX9 453 aaPredicted RBP49.39■■■■■ 5.5
SRSF11-209ENST00000463877 PBRM1Q86U86 1689 aa49.37■■■■■ 5.49
SRSF11-209ENST00000463877 ABCA5Q8WWZ7 1642 aa49.36■■■■■ 5.49
SRSF11-209ENST00000463877 TRIM41Q8WV44 630 aa49.25■■■■■ 5.47
SRSF11-209ENST00000463877 SYNJ2O15056 1496 aa49.24■■■■■ 5.47
SRSF11-209ENST00000463877 RIMBP3CA6NJZ7 1639 aa49.09■■■■■ 5.45
SRSF11-209ENST00000463877 RIMBP3BA6NNM3 1639 aa49.09■■■■■ 5.45
SRSF11-209ENST00000463877 RIMBP3Q9UFD9 1639 aa49.09■■■■■ 5.45
SRSF11-209ENST00000463877 ARHGEF11O15085 1522 aa49.04■■■■■ 5.44
SRSF11-209ENST00000463877 ERICH3Q5RHP9 1530 aa48.99■■■■■ 5.43
SRSF11-209ENST00000463877 ADAMTS12P58397 1594 aa48.93■■■■■ 5.42
SRSF11-209ENST00000463877 FHAD1B1AJZ9 1412 aa48.92■■■■■ 5.42
SRSF11-209ENST00000463877 CLASP1Q7Z460 1538 aa48.91■■■■■ 5.42
SRSF11-209ENST00000463877 GRIN2AQ12879 1464 aa48.87■■■■■ 5.41
SRSF11-209ENST00000463877 KIF27Q86VH2 1401 aa48.8■■■■■ 5.4
SRSF11-209ENST00000463877 CYB5RLQ6IPT4 315 aa48.75■■■■■ 5.39
SRSF11-209ENST00000463877 NUP160Q12769 1436 aa48.64■■■■■ 5.38
SRSF11-209ENST00000463877 IGF1RP08069 1367 aa48.61■■■■■ 5.37
SRSF11-209ENST00000463877 ARAP1Q96P48 1450 aa48.61■■■■■ 5.37
SRSF11-209ENST00000463877 CEP170Q5SW79 1584 aa48.6■■■■■ 5.37
SRSF11-209ENST00000463877 CUL7Q14999 1698 aa48.47■■■■■ 5.35
SRSF11-209ENST00000463877 CARMIL1Q5VZK9 1371 aa48.36■■■■■ 5.33
SRSF11-209ENST00000463877 SHROOM2Q13796 1616 aa48.28■■■■■ 5.32
SRSF11-209ENST00000463877 JPH4Q96JJ6 628 aa48.27■■■■■ 5.32
SRSF11-209ENST00000463877 ERCC6L2Q5T890 1561 aa48.22■■■■■ 5.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms